RNA–Protein interactions for RNA: ENST00000536548.5

CPSF7-216, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-216ENST00000536548 MRPS28Q9Y2Q9 187 aaKnown RBP6.86□□□□□ -1.31
CPSF7-216ENST00000536548 TMED3Q9Y3Q3 217 aa6.86□□□□□ -1.31
CPSF7-216ENST00000536548 SVILO95425 2214 aa6.86□□□□□ -1.31
CPSF7-216ENST00000536548 ZNF469Q96JG9 3925 aaPredicted RBP6.86□□□□□ -1.31
CPSF7-216ENST00000536548 SPG11Q96JI7 2443 aa6.86□□□□□ -1.31
CPSF7-216ENST00000536548 HIVEP3Q5T1R4 2406 aa6.85□□□□□ -1.31
CPSF7-216ENST00000536548 ELOA3CA0A087WX78 387 aaPredicted RBP6.85□□□□□ -1.31
CPSF7-216ENST00000536548 TMED7-TICAM2A0A0A6YYA0 188 aa6.85□□□□□ -1.31
CPSF7-216ENST00000536548 A0A0A6YYC8 382 aaPredicted RBP6.85□□□□□ -1.31
CPSF7-216ENST00000536548 OR2W5A6NFC9 320 aa6.85□□□□□ -1.31
CPSF7-216ENST00000536548 UMAD1C9J7I0 102 aa6.85□□□□□ -1.31
CPSF7-216ENST00000536548 E5RGE8 158 aa6.85□□□□□ -1.31
CPSF7-216ENST00000536548 NPIPA5E9PKD4 350 aa6.85□□□□□ -1.31
CPSF7-216ENST00000536548 I3L1I5 382 aaPredicted RBP6.85□□□□□ -1.31
CPSF7-216ENST00000536548 HRKO00198 91 aa6.85□□□□□ -1.31
CPSF7-216ENST00000536548 PLPP3O14495 311 aa6.85□□□□□ -1.31
CPSF7-216ENST00000536548 AGPAT2O15120 278 aa6.85□□□□□ -1.31
CPSF7-216ENST00000536548 SLC31A1O15431 190 aa6.85□□□□□ -1.31
CPSF7-216ENST00000536548 KCNAB3O43448 404 aa6.85□□□□□ -1.31
CPSF7-216ENST00000536548 HCRTR2O43614 444 aa6.85□□□□□ -1.31
CPSF7-216ENST00000536548 GPR137BO60478 399 aa6.85□□□□□ -1.31
CPSF7-216ENST00000536548 DEDDO75618 318 aa6.85□□□□□ -1.31
CPSF7-216ENST00000536548 NSA2O95478 260 aaKnown RBP6.85□□□□□ -1.31
CPSF7-216ENST00000536548 MPIG6BO95866 241 aa6.85□□□□□ -1.31
CPSF7-216ENST00000536548 IFNA10P01566 189 aa6.85□□□□□ -1.31
CPSF7-216ENST00000536548 SFTPBP07988 381 aa6.85□□□□□ -1.31
CPSF7-216ENST00000536548 HOXB5P09067 269 aa6.85□□□□□ -1.31
CPSF7-216ENST00000536548 OR8U9P0C7N5 309 aa6.85□□□□□ -1.31
CPSF7-216ENST00000536548 DANCRP0C864 163 aa6.85□□□□□ -1.31
CPSF7-216ENST00000536548 ZNF708P17019 499 aa6.85□□□□□ -1.31
CPSF7-216ENST00000536548 HOXA5P20719 270 aa6.85□□□□□ -1.31
CPSF7-216ENST00000536548 IL12BP29460 328 aa6.85□□□□□ -1.31
CPSF7-216ENST00000536548 SULT1A1P50225 295 aa6.85□□□□□ -1.31
CPSF7-216ENST00000536548 YPEL5P62699 121 aa6.85□□□□□ -1.31
CPSF7-216ENST00000536548 ZP4Q12836 540 aa6.85□□□□□ -1.31
CPSF7-216ENST00000536548 KIAA0141Q14154 515 aaPredicted RBP6.85□□□□□ -1.31
CPSF7-216ENST00000536548 CLINT1Q14677 625 aa6.85□□□□□ -1.31
CPSF7-216ENST00000536548 HYAL4Q2M3T9 481 aa6.85□□□□□ -1.31
CPSF7-216ENST00000536548 IAH1Q2TAA2 248 aaPredicted RBP6.85□□□□□ -1.31
CPSF7-216ENST00000536548 ANKRD55Q3KP44 614 aa6.85□□□□□ -1.31
CPSF7-216ENST00000536548 MIDNQ504T8 468 aa6.85□□□□□ -1.31
CPSF7-216ENST00000536548 ACER2Q5QJU3 275 aa6.85□□□□□ -1.31
CPSF7-216ENST00000536548 GPR157Q5UAW9 335 aa6.85□□□□□ -1.31
CPSF7-216ENST00000536548 C1orf140Q5VVS0 124 aa6.85□□□□□ -1.31
CPSF7-216ENST00000536548 ZNF529Q6P280 563 aa6.85□□□□□ -1.31
CPSF7-216ENST00000536548 GUSBP11Q6P575 273 aa6.85□□□□□ -1.31
CPSF7-216ENST00000536548 TMPPEQ6ZT21 453 aa6.85□□□□□ -1.31
CPSF7-216ENST00000536548 DCXRQ7Z4W1 244 aa6.85□□□□□ -1.31
CPSF7-216ENST00000536548 STX12Q86Y82 276 aa6.85□□□□□ -1.31
CPSF7-216ENST00000536548 SGPP2Q8IWX5 399 aa6.85□□□□□ -1.31
CPSF7-216ENST00000536548 LRRC18Q8N456 261 aa6.85□□□□□ -1.31
CPSF7-216ENST00000536548 C19orf47Q8N9M1 422 aaKnown RBP6.85□□□□□ -1.31
CPSF7-216ENST00000536548 OR8G5Q8NG78 346 aa6.85□□□□□ -1.31
CPSF7-216ENST00000536548 OR52N4Q8NGI2 321 aa6.85□□□□□ -1.31
CPSF7-216ENST00000536548 OR13G1Q8NGZ3 307 aa6.85□□□□□ -1.31
CPSF7-216ENST00000536548 OR8U1Q8NH10 309 aa6.85□□□□□ -1.31
CPSF7-216ENST00000536548 RNASE11Q8TAA1 199 aaKnown RBP6.85□□□□□ -1.31
CPSF7-216ENST00000536548 RNF133Q8WVZ7 376 aa6.85□□□□□ -1.31
CPSF7-216ENST00000536548 SLC25A36Q96CQ1 311 aa6.85□□□□□ -1.31
CPSF7-216ENST00000536548 ZDHHC12Q96GR4 267 aa6.85□□□□□ -1.31
CPSF7-216ENST00000536548 OR10C1Q96KK4 312 aa6.85□□□□□ -1.31
CPSF7-216ENST00000536548 C5orf34Q96MH7 638 aa6.85□□□□□ -1.31
CPSF7-216ENST00000536548 NAA11Q9BSU3 229 aaPredicted RBP6.85□□□□□ -1.31
CPSF7-216ENST00000536548 TMEM59Q9BXS4 323 aa6.85□□□□□ -1.31
CPSF7-216ENST00000536548 BCL2L14Q9BZR8 327 aa6.85□□□□□ -1.31
CPSF7-216ENST00000536548 EIF5A2Q9GZV4 153 aaKnown RBP6.85□□□□□ -1.31
CPSF7-216ENST00000536548 LPAR5Q9H1C0 372 aa6.85□□□□□ -1.31
CPSF7-216ENST00000536548 SLC35B3Q9H1N7 401 aa6.85□□□□□ -1.31
CPSF7-216ENST00000536548 C19orf12Q9NSK7 152 aa6.85□□□□□ -1.31
CPSF7-216ENST00000536548 GFOD1Q9NXC2 390 aa6.85□□□□□ -1.31
CPSF7-216ENST00000536548 GSKIPQ9P0R6 139 aa6.85□□□□□ -1.31
CPSF7-216ENST00000536548 PISDQ9UG56 409 aa6.85□□□□□ -1.31
CPSF7-216ENST00000536548 TUBD1Q9UJT1 453 aa6.85□□□□□ -1.31
CPSF7-216ENST00000536548 NPIPA1Q9UND3 350 aa6.85□□□□□ -1.31
CPSF7-216ENST00000536548 COA3Q9Y2R0 106 aaPredicted RBP6.85□□□□□ -1.31
CPSF7-216ENST00000536548 NSG2Q9Y328 171 aa6.85□□□□□ -1.31
CPSF7-216ENST00000536548 ESPL1Q14674 2120 aa6.85□□□□□ -1.31
CPSF7-216ENST00000536548 CCDC187A0A096LP49 1063 aa6.84□□□□□ -1.31
CPSF7-216ENST00000536548 A0A1W2PPE3 182 aa6.84□□□□□ -1.31
CPSF7-216ENST00000536548 BTBD17A6NE02 478 aa6.84□□□□□ -1.31
CPSF7-216ENST00000536548 C17orf105B2RV13 164 aa6.84□□□□□ -1.31
CPSF7-216ENST00000536548 SEC14L6B5MCN3 397 aa6.84□□□□□ -1.31
CPSF7-216ENST00000536548 C10orf142B7Z368 130 aa6.84□□□□□ -1.31
CPSF7-216ENST00000536548 TGFBR3LH3BV60 316 aa6.84□□□□□ -1.31
CPSF7-216ENST00000536548 PPIHO43447 177 aaKnown RBP6.84□□□□□ -1.31
CPSF7-216ENST00000536548 HCRTR1O43613 425 aa6.84□□□□□ -1.31
CPSF7-216ENST00000536548 GMFGO60234 142 aa6.84□□□□□ -1.31
CPSF7-216ENST00000536548 CDC14BO60729 498 aa6.84□□□□□ -1.31
CPSF7-216ENST00000536548 ZNF354AO60765 605 aaPredicted RBP6.84□□□□□ -1.31
CPSF7-216ENST00000536548 OR2C1O95371 312 aa6.84□□□□□ -1.31
CPSF7-216ENST00000536548 NUDT14O95848 222 aa6.84□□□□□ -1.31
CPSF7-216ENST00000536548 TNFP01375 233 aa6.84□□□□□ -1.31
CPSF7-216ENST00000536548 CTSDP07339 412 aaPredicted RBP6.84□□□□□ -1.31
CPSF7-216ENST00000536548 P2RY1P47900 373 aa6.84□□□□□ -1.31
CPSF7-216ENST00000536548 CDX1P47902 265 aaPredicted RBP6.84□□□□□ -1.31
CPSF7-216ENST00000536548 ZNF84P51523 738 aa6.84□□□□□ -1.31
CPSF7-216ENST00000536548 P2RY4P51582 365 aa6.84□□□□□ -1.31
CPSF7-216ENST00000536548 SUPT4H1P63272 117 aaKnown RBP6.84□□□□□ -1.31
CPSF7-216ENST00000536548 CSNK2A1P68400 391 aaPredicted RBP6.84□□□□□ -1.31
CPSF7-216ENST00000536548 SLC35A1P78382 337 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms