RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 FAHP16930 419 aa10.27□□□□□ -0.77
PRKDC-207ENST00000536483 MPZP25189 248 aa10.27□□□□□ -0.77
PRKDC-207ENST00000536483 GPM6AP51674 278 aa10.27□□□□□ -0.77
PRKDC-207ENST00000536483 ACTC1P68032 377 aa10.27□□□□□ -0.77
PRKDC-207ENST00000536483 ACTA1P68133 377 aa10.27□□□□□ -0.77
PRKDC-207ENST00000536483 CDONQ4KMG0 1287 aa10.27□□□□□ -0.77
PRKDC-207ENST00000536483 WDR38Q5JTN6 314 aa10.27□□□□□ -0.77
PRKDC-207ENST00000536483 CLVS2Q5SYC1 327 aa10.27□□□□□ -0.77
PRKDC-207ENST00000536483 THAP5Q7Z6K1 395 aa10.27□□□□□ -0.77
PRKDC-207ENST00000536483 BOLLQ8N9W6 283 aaKnown RBP10.27□□□□□ -0.77
PRKDC-207ENST00000536483 PNLDC1Q8NA58 520 aaKnown RBP10.27□□□□□ -0.77
PRKDC-207ENST00000536483 ZNF671Q8TAW3 534 aa10.27□□□□□ -0.77
PRKDC-207ENST00000536483 FAM71F1Q96KD3 344 aaPredicted RBP10.27□□□□□ -0.77
PRKDC-207ENST00000536483 MRPS26Q9BYN8 205 aaKnown RBP10.27□□□□□ -0.77
PRKDC-207ENST00000536483 RPUSD1Q9UJJ7 312 aaKnown RBP10.27□□□□□ -0.77
PRKDC-207ENST00000536483 ZNF222Q9UK12 451 aa10.27□□□□□ -0.77
PRKDC-207ENST00000536483 WNK1Q9H4A3 2382 aa10.27□□□□□ -0.77
PRKDC-207ENST00000536483 PQLC2LA1A4F0 135 aa10.26□□□□□ -0.77
PRKDC-207ENST00000536483 P2RY10O00398 339 aa10.26□□□□□ -0.77
PRKDC-207ENST00000536483 ISG15P05161 165 aa10.26□□□□□ -0.77
PRKDC-207ENST00000536483 CRYBA1P05813 215 aa10.26□□□□□ -0.77
PRKDC-207ENST00000536483 MYF6P23409 242 aa10.26□□□□□ -0.77
PRKDC-207ENST00000536483 ATP6V1E1P36543 226 aa10.26□□□□□ -0.77
PRKDC-207ENST00000536483 RPL5P46777 297 aaKnown RBP10.26□□□□□ -0.77
PRKDC-207ENST00000536483 CCR9P51686 369 aa10.26□□□□□ -0.77
PRKDC-207ENST00000536483 CAV3P56539 151 aa10.26□□□□□ -0.77
PRKDC-207ENST00000536483 FGF12P61328 243 aa10.26□□□□□ -0.77
PRKDC-207ENST00000536483 GPR157Q5UAW9 335 aa10.26□□□□□ -0.77
PRKDC-207ENST00000536483 FIP1L1Q6UN15 594 aaKnown RBP10.26□□□□□ -0.77
PRKDC-207ENST00000536483 C17orf107Q6ZR85 190 aa10.26□□□□□ -0.77
PRKDC-207ENST00000536483 C1orf122Q6ZSJ8 110 aa10.26□□□□□ -0.77
PRKDC-207ENST00000536483 BTN2A1Q7KYR7 527 aa10.26□□□□□ -0.77
PRKDC-207ENST00000536483 ZNF573Q86YE8 665 aa10.26□□□□□ -0.77
PRKDC-207ENST00000536483 DHRSXQ8N5I4 330 aa10.26□□□□□ -0.77
PRKDC-207ENST00000536483 YIPF7Q8N8F6 280 aa10.26□□□□□ -0.77
PRKDC-207ENST00000536483 OR10H4Q8NGA5 316 aa10.26□□□□□ -0.77
PRKDC-207ENST00000536483 WFDC12Q8WWY7 111 aa10.26□□□□□ -0.77
PRKDC-207ENST00000536483 MED30Q96HR3 178 aa10.26□□□□□ -0.77
PRKDC-207ENST00000536483 CCL13Q99616 98 aa10.26□□□□□ -0.77
PRKDC-207ENST00000536483 TTTY10Q9BZA0 68 aa10.26□□□□□ -0.77
PRKDC-207ENST00000536483 SIRPDQ9H106 197 aa10.26□□□□□ -0.77
PRKDC-207ENST00000536483 WDR13Q9H1Z4 485 aa10.26□□□□□ -0.77
PRKDC-207ENST00000536483 BEX1Q9HBH7 125 aa10.26□□□□□ -0.77
PRKDC-207ENST00000536483 FAM118AQ9NWS6 357 aa10.26□□□□□ -0.77
PRKDC-207ENST00000536483 SMPD3Q9NY59 655 aaPredicted RBP10.26□□□□□ -0.77
PRKDC-207ENST00000536483 KPTNQ9Y664 436 aa10.26□□□□□ -0.77
PRKDC-207ENST00000536483 NOTCH1P46531 2555 aa10.26□□□□□ -0.77
PRKDC-207ENST00000536483 IGHV3OR15-7A0A075B7D8 119 aa10.25□□□□□ -0.77
PRKDC-207ENST00000536483 A0A1B0GUS0 222 aa10.25□□□□□ -0.77
PRKDC-207ENST00000536483 LOC100130705A0A1B0GUX0 176 aa10.25□□□□□ -0.77
PRKDC-207ENST00000536483 SIGLEC5O15389 551 aa10.25□□□□□ -0.77
PRKDC-207ENST00000536483 RHBDL1O75783 438 aa10.25□□□□□ -0.77
PRKDC-207ENST00000536483 PGA5P0DJD9 388 aa10.25□□□□□ -0.77
PRKDC-207ENST00000536483 RAG2P55895 527 aa10.25□□□□□ -0.77
PRKDC-207ENST00000536483 ERVK11-1P61568 191 aa10.25□□□□□ -0.77
PRKDC-207ENST00000536483 RELBQ01201 579 aa10.25□□□□□ -0.77
PRKDC-207ENST00000536483 ZIK1Q3SY52 487 aaPredicted RBP10.25□□□□□ -0.77
PRKDC-207ENST00000536483 KCTD21Q4G0X4 260 aa10.25□□□□□ -0.77
PRKDC-207ENST00000536483 CEP78Q5JTW2 689 aa10.25□□□□□ -0.77
PRKDC-207ENST00000536483 TTC23Q5W5X9 447 aa10.25□□□□□ -0.77
PRKDC-207ENST00000536483 RUSC1-AS1Q66K80 236 aa10.25□□□□□ -0.77
PRKDC-207ENST00000536483 METAP1DQ6UB28 335 aaPredicted RBP10.25□□□□□ -0.77
PRKDC-207ENST00000536483 Q6YL49 198 aa10.25□□□□□ -0.77
PRKDC-207ENST00000536483 MOB3CQ70IA8 216 aa10.25□□□□□ -0.77
PRKDC-207ENST00000536483 ENTHD1Q8IYW4 607 aa10.25□□□□□ -0.77
PRKDC-207ENST00000536483 PRSS35Q8N3Z0 413 aa10.25□□□□□ -0.77
PRKDC-207ENST00000536483 ACBD7Q8N6N7 88 aa10.25□□□□□ -0.77
PRKDC-207ENST00000536483 POC1AQ8NBT0 407 aa10.25□□□□□ -0.77
PRKDC-207ENST00000536483 OR4F5Q8NH21 305 aa10.25□□□□□ -0.77
PRKDC-207ENST00000536483 SEH1LQ96EE3 360 aa10.25□□□□□ -0.77
PRKDC-207ENST00000536483 RNFT2Q96EX2 444 aa10.25□□□□□ -0.77
PRKDC-207ENST00000536483 SDSLQ96GA7 329 aa10.25□□□□□ -0.77
PRKDC-207ENST00000536483 Q96MT0 163 aa10.25□□□□□ -0.77
PRKDC-207ENST00000536483 WDFY2Q96P53 400 aa10.25□□□□□ -0.77
PRKDC-207ENST00000536483 TBX15Q96SF7 602 aa10.25□□□□□ -0.77
PRKDC-207ENST00000536483 ZNF649Q9BS31 505 aa10.25□□□□□ -0.77
PRKDC-207ENST00000536483 DCTN5Q9BTE1 182 aa10.25□□□□□ -0.77
PRKDC-207ENST00000536483 ADI1Q9BV57 179 aa10.25□□□□□ -0.77
PRKDC-207ENST00000536483 CHIAQ9BZP6 476 aa10.25□□□□□ -0.77
PRKDC-207ENST00000536483 PKIBQ9C010 78 aa10.25□□□□□ -0.77
PRKDC-207ENST00000536483 CNTD2Q9H8S5 307 aa10.25□□□□□ -0.77
PRKDC-207ENST00000536483 SEBOXQ9HB31 216 aaPredicted RBP10.25□□□□□ -0.77
PRKDC-207ENST00000536483 HES4Q9HCC6 221 aa10.25□□□□□ -0.77
PRKDC-207ENST00000536483 C1RLQ9NZP8 487 aa10.25□□□□□ -0.77
PRKDC-207ENST00000536483 NLKQ9UBE8 527 aa10.25□□□□□ -0.77
PRKDC-207ENST00000536483 GMPPBQ9Y5P6 360 aa10.25□□□□□ -0.77
PRKDC-207ENST00000536483 IGKV1D-17A0A075B6S4 117 aa10.24□□□□□ -0.77
PRKDC-207ENST00000536483 OR2AT4A6NND4 320 aa10.24□□□□□ -0.77
PRKDC-207ENST00000536483 J3QT63 122 aa10.24□□□□□ -0.77
PRKDC-207ENST00000536483 AKR7A2O43488 359 aa10.24□□□□□ -0.77
PRKDC-207ENST00000536483 NDUFB3O43676 98 aa10.24□□□□□ -0.77
PRKDC-207ENST00000536483 RPP14O95059 124 aaKnown RBP10.24□□□□□ -0.77
PRKDC-207ENST00000536483 APOL3O95236 402 aa10.24□□□□□ -0.77
PRKDC-207ENST00000536483 IGHA1P01876 353 aa10.24□□□□□ -0.77
PRKDC-207ENST00000536483 UBCP0CG48 685 aaKnown RBP10.24□□□□□ -0.77
PRKDC-207ENST00000536483 PSG2P11465 335 aa10.24□□□□□ -0.77
PRKDC-207ENST00000536483 CAPGP40121 348 aa10.24□□□□□ -0.77
PRKDC-207ENST00000536483 KIR3DL2P43630 455 aa10.24□□□□□ -0.77
PRKDC-207ENST00000536483 RAB40BQ12829 278 aa10.24□□□□□ -0.77
PRKDC-207ENST00000536483 IL24Q13007 206 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms