RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 MCHR2Q969V1 340 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 TMEM106AQ96A25 262 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 APH1AQ96BI3 265 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 NEURL3Q96EH8 262 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 BOD1Q96IK1 185 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 TMEM56Q96MV1 263 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 C6orf106Q9H6K1 298 aaPredicted RBP3.28□□□□□ -1.88
MCF2-210ENST00000536274 GPR35Q9HC97 309 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 TAS2R8Q9NYW2 309 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 OR52A1Q9UKL2 312 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 IER3IP1Q9Y5U9 82 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 TMEM56-RWDD3S4R434 201 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 RBFOX3A6NFN3 312 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 ELOA3DA6NLF2 546 aaPredicted RBP3.28□□□□□ -1.88
MCF2-210ENST00000536274 AHRRA9YTQ3 701 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 H7C1C5 153 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 TAAR5O14804 337 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 ZNF749O43361 778 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 KNG1P01042 644 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 PPBPP02775 128 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 SRP19P09132 144 aaKnown RBP3.28□□□□□ -1.88
MCF2-210ENST00000536274 RAB40ALP0C0E4 278 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 ZNF708P17019 499 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 GSTM3P21266 225 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 GALP22466 123 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 GLRA1P23415 457 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 TNFSF4P23510 183 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 GABRR1P24046 479 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 FCARP24071 287 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 GCH1P30793 250 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 SLC6A12P48065 614 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 PPOXP50336 477 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 RAB38P57729 211 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 TAS2R30P59541 319 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 CD81P60033 236 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 LCN6P62502 163 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 GAS6Q14393 721 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 ELOA3BQ3SY89 546 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 DNLZQ5SXM8 178 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 PRSS54Q6PEW0 395 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 CD300LDQ6UXZ3 194 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 Q6ZWC4 215 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 TCF23Q7RTU1 214 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 RNF144BQ7Z419 303 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 CPEB2Q7Z5Q1 589 aaKnown RBP3.28□□□□□ -1.88
MCF2-210ENST00000536274 UMODL1-AS1Q8N2C9 162 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 SUMF1Q8NBK3 374 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 ELOA3Q8NG57 546 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 GPX8Q8TED1 209 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 LIPHQ8WWY8 451 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 RAB40AQ8WXH6 277 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 ST6GALNAC6Q969X2 333 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 TECTBQ96PL2 329 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 TNFRSF13CQ96RJ3 184 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 LPAR4Q99677 370 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 MCHR1Q99705 422 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 WNT10AQ9GZT5 417 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 ZNF701Q9NV72 531 aaPredicted RBP3.28□□□□□ -1.88
MCF2-210ENST00000536274 APOBEC3BQ9UH17 382 aaKnown RBP3.28□□□□□ -1.88
MCF2-210ENST00000536274 ERRFI1Q9UJM3 462 aaPredicted RBP3.28□□□□□ -1.88
MCF2-210ENST00000536274 PLAGL1Q9UM63 463 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 PIN4Q9Y237 131 aaKnown RBP3.28□□□□□ -1.88
MCF2-210ENST00000536274 ZNF281Q9Y2X9 895 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 TNRC6BQ9UPQ9 1833 aaKnown RBP3.28□□□□□ -1.88
MCF2-210ENST00000536274 VPS13AQ96RL7 3174 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 DOCK6Q96HP0 2047 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 SCN3AQ9NY46 2000 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 CACNA1DQ01668 2161 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 IGLON5A6NGN9 336 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 OR2T8A6NH00 312 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 ZFP92A6NM28 416 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 FTCDNL1E5RQL4 147 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 M0QZQ0 153 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 SLC31A1O15431 190 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 FGF17O60258 216 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 LMX1BO60663 402 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 CTSVO60911 334 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 KAT7O95251 611 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 CSTAP01040 98 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 IGLV3-25P01717 112 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 MELTFP08582 738 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 IRF1P10914 325 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 HIST1H1CP16403 213 aaKnown RBP3.28□□□□□ -1.88
MCF2-210ENST00000536274 PRPH2P23942 346 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 UCP1P25874 307 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 HOXD9P28356 352 aaPredicted RBP3.28□□□□□ -1.88
MCF2-210ENST00000536274 FAM3BP58499 235 aaPredicted RBP3.28□□□□□ -1.88
MCF2-210ENST00000536274 TAS2R19P59542 299 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 HSF1Q00613 529 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 RUNX1Q01196 453 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 SRSF5Q13243 272 aaKnown RBP3.28□□□□□ -1.88
MCF2-210ENST00000536274 CHRFAM7AQ494W8 412 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 PRR31Q5SQ13 230 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 FAM71E1Q6IPT2 247 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 ANKRD16Q6P6B7 361 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 CLEC18BQ6UXF7 455 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 Q6ZN92 141 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 TRAPPC6BQ86SZ2 158 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 GID4Q8IVV7 300 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 SLC35F2Q8IXU6 374 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms