RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 DLGAP1O14490 977 aa10.74□□□□□ -0.69
RTN3-207ENST00000536011 KCNAB3O43448 404 aa10.74□□□□□ -0.69
RTN3-207ENST00000536011 ANGPTL7O43827 346 aa10.74□□□□□ -0.69
RTN3-207ENST00000536011 PRKYO43930 277 aa10.74□□□□□ -0.69
RTN3-207ENST00000536011 HAAOP46952 286 aa10.74□□□□□ -0.69
RTN3-207ENST00000536011 CXCR4P61073 352 aa10.74□□□□□ -0.69
RTN3-207ENST00000536011 DEFA6Q01524 100 aa10.74□□□□□ -0.69
RTN3-207ENST00000536011 EGR3Q06889 387 aa10.74□□□□□ -0.69
RTN3-207ENST00000536011 SRSF4Q08170 494 aaKnown RBP10.74□□□□□ -0.69
RTN3-207ENST00000536011 NXNL2Q5VZ03 156 aa10.74□□□□□ -0.69
RTN3-207ENST00000536011 ACP7Q6ZNF0 438 aa10.74□□□□□ -0.69
RTN3-207ENST00000536011 Q6ZSV7 163 aa10.74□□□□□ -0.69
RTN3-207ENST00000536011 SLC35F2Q8IXU6 374 aa10.74□□□□□ -0.69
RTN3-207ENST00000536011 ZNRF1Q8ND25 227 aa10.74□□□□□ -0.69
RTN3-207ENST00000536011 BEND2Q8NDZ0 799 aa10.74□□□□□ -0.69
RTN3-207ENST00000536011 OR51G2Q8NGK0 314 aa10.74□□□□□ -0.69
RTN3-207ENST00000536011 TNFRSF14Q92956 283 aa10.74□□□□□ -0.69
RTN3-207ENST00000536011 HEXA-AS1Q9H8Q6 139 aa10.74□□□□□ -0.69
RTN3-207ENST00000536011 PLEKHA1Q9HB21 404 aa10.74□□□□□ -0.69
RTN3-207ENST00000536011 RAB18Q9NP72 206 aa10.74□□□□□ -0.69
RTN3-207ENST00000536011 CLN6Q9NWW5 311 aa10.74□□□□□ -0.69
RTN3-207ENST00000536011 ZNF222Q9UK12 451 aa10.74□□□□□ -0.69
RTN3-207ENST00000536011 SNX5Q9Y5X3 404 aa10.74□□□□□ -0.69
RTN3-207ENST00000536011 R4GMQ9 66 aa10.74□□□□□ -0.69
RTN3-207ENST00000536011 G3V2T6 193 aa10.73□□□□□ -0.69
RTN3-207ENST00000536011 DYNC1I1O14576 645 aa10.73□□□□□ -0.69
RTN3-207ENST00000536011 TSPAN9O75954 239 aa10.73□□□□□ -0.69
RTN3-207ENST00000536011 NXPH2O95156 264 aa10.73□□□□□ -0.69
RTN3-207ENST00000536011 TTRP02766 147 aa10.73□□□□□ -0.69
RTN3-207ENST00000536011 PGA5P0DJD9 388 aa10.73□□□□□ -0.69
RTN3-207ENST00000536011 RASSF2P50749 326 aa10.73□□□□□ -0.69
RTN3-207ENST00000536011 DAPP51397 102 aa10.73□□□□□ -0.69
RTN3-207ENST00000536011 RPL31P62899 125 aaKnown RBP10.73□□□□□ -0.69
RTN3-207ENST00000536011 MFGE8Q08431 387 aaPredicted RBP10.73□□□□□ -0.69
RTN3-207ENST00000536011 AANATQ16613 207 aa10.73□□□□□ -0.69
RTN3-207ENST00000536011 C2orf68Q2NKX9 166 aa10.73□□□□□ -0.69
RTN3-207ENST00000536011 PDLIM3Q53GG5 364 aaPredicted RBP10.73□□□□□ -0.69
RTN3-207ENST00000536011 SLX4IPQ5VYV7 408 aa10.73□□□□□ -0.69
RTN3-207ENST00000536011 C11orf88Q6PI97 169 aa10.73□□□□□ -0.69
RTN3-207ENST00000536011 ZDHHC13Q8IUH4 622 aa10.73□□□□□ -0.69
RTN3-207ENST00000536011 ELMOD2Q8IZ81 293 aa10.73□□□□□ -0.69
RTN3-207ENST00000536011 TMEM163Q8TC26 289 aa10.73□□□□□ -0.69
RTN3-207ENST00000536011 UTP4Q969X6 686 aaKnown RBP10.73□□□□□ -0.69
RTN3-207ENST00000536011 RBM4BQ9BQ04 359 aaKnown RBP10.73□□□□□ -0.69
RTN3-207ENST00000536011 TTTY10Q9BZA0 68 aa10.73□□□□□ -0.69
RTN3-207ENST00000536011 USE1Q9NZ43 259 aa10.73□□□□□ -0.69
RTN3-207ENST00000536011 OR52A1Q9UKL2 312 aa10.73□□□□□ -0.69
RTN3-207ENST00000536011 COPS3Q9UNS2 423 aa10.73□□□□□ -0.69
RTN3-207ENST00000536011 MAB21L2Q9Y586 359 aa10.73□□□□□ -0.69
RTN3-207ENST00000536011 NOTCH1P46531 2555 aa10.73□□□□□ -0.69
RTN3-207ENST00000536011 RFPL4AA6NLU0 287 aa10.72□□□□□ -0.69
RTN3-207ENST00000536011 ZAR1LA6NP61 321 aa10.72□□□□□ -0.69
RTN3-207ENST00000536011 RFPL4AL1F8VTS6 287 aa10.72□□□□□ -0.69
RTN3-207ENST00000536011 NOS1APO75052 506 aaPredicted RBP10.72□□□□□ -0.69
RTN3-207ENST00000536011 TFF1P04155 84 aa10.72□□□□□ -0.69
RTN3-207ENST00000536011 KRT8P05787 483 aa10.72□□□□□ -0.69
RTN3-207ENST00000536011 FCGR1AP12314 374 aa10.72□□□□□ -0.69
RTN3-207ENST00000536011 GABRA5P31644 462 aa10.72□□□□□ -0.69
RTN3-207ENST00000536011 PRDX2P32119 198 aa10.72□□□□□ -0.69
RTN3-207ENST00000536011 PRB3Q04118 309 aaPredicted RBP10.72□□□□□ -0.69
RTN3-207ENST00000536011 ATP6AP1Q15904 470 aa10.72□□□□□ -0.69
RTN3-207ENST00000536011 TMEM42Q69YG0 159 aa10.72□□□□□ -0.69
RTN3-207ENST00000536011 ASPHD2Q6ICH7 369 aa10.72□□□□□ -0.69
RTN3-207ENST00000536011 LIAT1Q6ZQX7 453 aa10.72□□□□□ -0.69
RTN3-207ENST00000536011 TCEANCQ8N8B7 351 aa10.72□□□□□ -0.69
RTN3-207ENST00000536011 CCDC54Q8NEL0 328 aa10.72□□□□□ -0.69
RTN3-207ENST00000536011 OR4C13Q8NGP0 309 aa10.72□□□□□ -0.69
RTN3-207ENST00000536011 SLC7A6OSQ96CW6 309 aaPredicted RBP10.72□□□□□ -0.69
RTN3-207ENST00000536011 NRIP2Q9BQI9 281 aa10.72□□□□□ -0.69
RTN3-207ENST00000536011 PPA2Q9H2U2 334 aa10.72□□□□□ -0.69
RTN3-207ENST00000536011 ELL3Q9HB65 397 aaPredicted RBP10.72□□□□□ -0.69
RTN3-207ENST00000536011 ADGRL4Q9HBW9 690 aa10.72□□□□□ -0.69
RTN3-207ENST00000536011 SLC7A11Q9UPY5 501 aa10.72□□□□□ -0.69
RTN3-207ENST00000536011 V9GYS6 101 aa10.72□□□□□ -0.69
RTN3-207ENST00000536011 PQLC2LA1A4F0 135 aa10.71□□□□□ -0.69
RTN3-207ENST00000536011 PRR32B1ATL7 298 aa10.71□□□□□ -0.69
RTN3-207ENST00000536011 H3BUX3 64 aa10.71□□□□□ -0.69
RTN3-207ENST00000536011 SRSF10O75494 262 aaKnown RBP10.71□□□□□ -0.69
RTN3-207ENST00000536011 FASP25445 335 aa10.71□□□□□ -0.69
RTN3-207ENST00000536011 DLX1P56177 255 aa10.71□□□□□ -0.69
RTN3-207ENST00000536011 LGALS4P56470 323 aa10.71□□□□□ -0.69
RTN3-207ENST00000536011 ERVFRD-1P60508 538 aa10.71□□□□□ -0.69
RTN3-207ENST00000536011 LRRC75BQ2VPJ9 315 aa10.71□□□□□ -0.69
RTN3-207ENST00000536011 AADACL4Q5VUY2 407 aa10.71□□□□□ -0.69
RTN3-207ENST00000536011 C12orf73Q69YU5 71 aa10.71□□□□□ -0.69
RTN3-207ENST00000536011 ASRGL1Q7L266 308 aa10.71□□□□□ -0.69
RTN3-207ENST00000536011 CALHM1Q8IU99 346 aa10.71□□□□□ -0.69
RTN3-207ENST00000536011 PNKDQ8N490 385 aa10.71□□□□□ -0.69
RTN3-207ENST00000536011 SSX3Q99909 188 aa10.71□□□□□ -0.69
RTN3-207ENST00000536011 APOL4Q9BPW4 351 aa10.71□□□□□ -0.69
RTN3-207ENST00000536011 PKIBQ9C010 78 aa10.71□□□□□ -0.69
RTN3-207ENST00000536011 GABARAPL1Q9H0R8 117 aa10.71□□□□□ -0.69
RTN3-207ENST00000536011 GPR173Q9NS66 373 aa10.71□□□□□ -0.69
RTN3-207ENST00000536011 C19orf12Q9NSK7 152 aa10.71□□□□□ -0.69
RTN3-207ENST00000536011 FBLN5Q9UBX5 448 aa10.71□□□□□ -0.69
RTN3-207ENST00000536011 WARS2Q9UGM6 360 aaKnown RBP10.71□□□□□ -0.69
RTN3-207ENST00000536011 WNK1Q9H4A3 2382 aa10.7□□□□□ -0.7
RTN3-207ENST00000536011 SYNGR1O43759 233 aa10.7□□□□□ -0.7
RTN3-207ENST00000536011 GATBO75879 557 aaKnown RBP10.7□□□□□ -0.7
RTN3-207ENST00000536011 OR2T7P0C7T2 308 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms