RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 CALCRP30988 508 aa11.3□□□□□ -0.6
SPG11-203ENST00000535302 CHRNA7P36544 502 aa11.3□□□□□ -0.6
SPG11-203ENST00000535302 CDK5R1Q15078 307 aa11.3□□□□□ -0.6
SPG11-203ENST00000535302 FNDC7Q5VTL7 733 aa11.3□□□□□ -0.6
SPG11-203ENST00000535302 KCNK15Q9H427 330 aa11.3□□□□□ -0.6
SPG11-203ENST00000535302 ZMIZ1Q9ULJ6 1067 aa11.3□□□□□ -0.6
SPG11-203ENST00000535302 TRBV5-4A0A0C4DH59 114 aa11.3□□□□□ -0.6
SPG11-203ENST00000535302 DHHO43323 396 aa11.3□□□□□ -0.6
SPG11-203ENST00000535302 RHBDL1O75783 438 aa11.3□□□□□ -0.6
SPG11-203ENST00000535302 SLC37A1P57057 533 aa11.3□□□□□ -0.6
SPG11-203ENST00000535302 RAB1AP62820 205 aa11.3□□□□□ -0.6
SPG11-203ENST00000535302 WDR88Q6ZMY6 472 aa11.3□□□□□ -0.6
SPG11-203ENST00000535302 PPP1R1CQ8WVI7 109 aa11.3□□□□□ -0.6
SPG11-203ENST00000535302 NOL4LQ96MY1 436 aaPredicted RBP11.3□□□□□ -0.6
SPG11-203ENST00000535302 VN1R1Q9GZP7 353 aa11.3□□□□□ -0.6
SPG11-203ENST00000535302 COA4Q9NYJ1 87 aa11.3□□□□□ -0.6
SPG11-203ENST00000535302 LOC389332A0A1B0GUA5 103 aa11.3□□□□□ -0.6
SPG11-203ENST00000535302 IFITM5A6NNB3 132 aa11.3□□□□□ -0.6
SPG11-203ENST00000535302 CTSVO60911 334 aa11.3□□□□□ -0.6
SPG11-203ENST00000535302 CBR3O75828 277 aa11.3□□□□□ -0.6
SPG11-203ENST00000535302 TSPAN12O95859 305 aa11.3□□□□□ -0.6
SPG11-203ENST00000535302 ANKRD34CP0C6C1 535 aa11.3□□□□□ -0.6
SPG11-203ENST00000535302 FZD2Q14332 565 aa11.3□□□□□ -0.6
SPG11-203ENST00000535302 PRSS3P2Q8NHM4 247 aa11.3□□□□□ -0.6
SPG11-203ENST00000535302 SMIM19Q96E16 107 aa11.3□□□□□ -0.6
SPG11-203ENST00000535302 PKD1L3Q7Z443 1732 aa11.3□□□□□ -0.6
SPG11-203ENST00000535302 TRGV5A0A0B4J1U4 118 aa11.3□□□□□ -0.6
SPG11-203ENST00000535302 HPP00738 406 aa11.3□□□□□ -0.6
SPG11-203ENST00000535302 JUNBP17275 347 aaPredicted RBP11.3□□□□□ -0.6
SPG11-203ENST00000535302 CD276Q5ZPR3 534 aa11.3□□□□□ -0.6
SPG11-203ENST00000535302 MYPOPQ86VE0 399 aaPredicted RBP11.3□□□□□ -0.6
SPG11-203ENST00000535302 UBALD2Q8IYN6 164 aa11.3□□□□□ -0.6
SPG11-203ENST00000535302 FOXB1Q99853 325 aa11.3□□□□□ -0.6
SPG11-203ENST00000535302 FZD6O60353 706 aa11.3□□□□□ -0.6
SPG11-203ENST00000535302 HSBP1O75506 76 aa11.3□□□□□ -0.6
SPG11-203ENST00000535302 DSCR4P56555 118 aaPredicted RBP11.3□□□□□ -0.6
SPG11-203ENST00000535302 LSRQ86X29 649 aaPredicted RBP11.3□□□□□ -0.6
SPG11-203ENST00000535302 RPEQ96AT9 228 aa11.3□□□□□ -0.6
SPG11-203ENST00000535302 LPAR5Q9H1C0 372 aa11.3□□□□□ -0.6
SPG11-203ENST00000535302 TMEM147Q9BVK8 224 aa11.3□□□□□ -0.6
SPG11-203ENST00000535302 IGHV3OR16-12A0A075B7B8 117 aa11.29□□□□□ -0.6
SPG11-203ENST00000535302 ADAM20O43506 726 aa11.29□□□□□ -0.6
SPG11-203ENST00000535302 PPP1CBP62140 327 aa11.29□□□□□ -0.6
SPG11-203ENST00000535302 NAT8BQ9UHF3 227 aa11.29□□□□□ -0.6
SPG11-203ENST00000535302 IGKV3D-11A0A0A0MRZ8 115 aa11.29□□□□□ -0.6
SPG11-203ENST00000535302 JTBO76095 146 aa11.29□□□□□ -0.6
SPG11-203ENST00000535302 IGKV3-11P04433 115 aa11.29□□□□□ -0.6
SPG11-203ENST00000535302 ACSM4P0C7M7 580 aa11.29□□□□□ -0.6
SPG11-203ENST00000535302 B2MP61769 119 aa11.29□□□□□ -0.6
SPG11-203ENST00000535302 LSM11P83369 360 aaKnown RBP eCLIP11.29□□□□□ -0.64e-7■■■■■ 30.9
SPG11-203ENST00000535302 Q3ZCU0 254 aa11.29□□□□□ -0.6
SPG11-203ENST00000535302 ZNF841Q6ZN19 808 aa11.29□□□□□ -0.6
SPG11-203ENST00000535302 SFTPA2Q8IWL1 248 aa11.29□□□□□ -0.6
SPG11-203ENST00000535302 MPZL1O95297 269 aa11.29□□□□□ -0.6
SPG11-203ENST00000535302 NTN1O95631 604 aa11.29□□□□□ -0.6
SPG11-203ENST00000535302 GIPP09681 153 aaPredicted RBP11.29□□□□□ -0.6
SPG11-203ENST00000535302 COX5AP20674 150 aa11.29□□□□□ -0.6
SPG11-203ENST00000535302 GCSHP23434 173 aa11.29□□□□□ -0.6
SPG11-203ENST00000535302 MPLP40238 635 aa11.29□□□□□ -0.6
SPG11-203ENST00000535302 BAK1Q16611 211 aa11.29□□□□□ -0.6
SPG11-203ENST00000535302 SPINK14Q6IE38 97 aa11.29□□□□□ -0.6
SPG11-203ENST00000535302 MRGPREQ86SM8 312 aa11.29□□□□□ -0.6
SPG11-203ENST00000535302 NT5CQ8TCD5 201 aa11.29□□□□□ -0.6
SPG11-203ENST00000535302 SRD5A3Q9H8P0 318 aa11.29□□□□□ -0.6
SPG11-203ENST00000535302 ALS2Q96Q42 1657 aa11.29□□□□□ -0.6
SPG11-203ENST00000535302 ZNF638Q14966 1978 aaKnown RBP11.29□□□□□ -0.6
SPG11-203ENST00000535302 HELTA6NFD8 242 aa11.29□□□□□ -0.6
SPG11-203ENST00000535302 AGFG2O95081 481 aa11.29□□□□□ -0.6
SPG11-203ENST00000535302 LALBAP00709 142 aa11.29□□□□□ -0.6
SPG11-203ENST00000535302 CD1EP15812 388 aa11.29□□□□□ -0.6
SPG11-203ENST00000535302 GABRB1P18505 474 aa11.29□□□□□ -0.6
SPG11-203ENST00000535302 NKG7Q16617 165 aa11.29□□□□□ -0.6
SPG11-203ENST00000535302 UQCC2Q9BRT2 126 aa11.29□□□□□ -0.6
SPG11-203ENST00000535302 FAAP24Q9BTP7 215 aa11.29□□□□□ -0.6
SPG11-203ENST00000535302 RER1O15258 196 aa11.29□□□□□ -0.6
SPG11-203ENST00000535302 OR2G2Q8NGZ5 317 aa11.29□□□□□ -0.6
SPG11-203ENST00000535302 LMO7DNF2Z398 122 aa11.28□□□□□ -0.6
SPG11-203ENST00000535302 RNASEK-C17orf49H0YIS7 233 aa11.28□□□□□ -0.6
SPG11-203ENST00000535302 MIDNQ504T8 468 aa11.28□□□□□ -0.6
SPG11-203ENST00000535302 ASB13Q8WXK3 278 aa11.28□□□□□ -0.6
SPG11-203ENST00000535302 TNRC6CQ9HCJ0 1690 aaKnown RBP11.28□□□□□ -0.6
SPG11-203ENST00000535302 OR4C46A6NHA9 309 aa11.28□□□□□ -0.6
SPG11-203ENST00000535302 ALG1L2C9J202 215 aa11.28□□□□□ -0.6
SPG11-203ENST00000535302 FZD5Q13467 585 aa11.28□□□□□ -0.6
SPG11-203ENST00000535302 PMS2P11Q13670 270 aa11.28□□□□□ -0.6
SPG11-203ENST00000535302 FOXB2Q5VYV0 432 aa11.28□□□□□ -0.6
SPG11-203ENST00000535302 ANKRD37Q7Z713 158 aa11.28□□□□□ -0.6
SPG11-203ENST00000535302 ABHD3Q8WU67 409 aa11.28□□□□□ -0.6
SPG11-203ENST00000535302 PIGMQ9H3S5 423 aa11.28□□□□□ -0.6
SPG11-203ENST00000535302 FBLL1A6NHQ2 334 aaKnown RBP11.28□□□□□ -0.6
SPG11-203ENST00000535302 E5RGE8 158 aa11.28□□□□□ -0.6
SPG11-203ENST00000535302 HTR1DP28221 377 aa11.28□□□□□ -0.6
SPG11-203ENST00000535302 TFPI2P48307 235 aa11.28□□□□□ -0.6
SPG11-203ENST00000535302 INPP5JQ15735 1006 aaPredicted RBP11.28□□□□□ -0.6
SPG11-203ENST00000535302 GSG1Q2KHT4 349 aa11.28□□□□□ -0.6
SPG11-203ENST00000535302 ZNF66Q6ZN08 573 aa11.28□□□□□ -0.6
SPG11-203ENST00000535302 LINC01555Q8NAE3 123 aa11.28□□□□□ -0.6
SPG11-203ENST00000535302 MMP25Q9NPA2 562 aa11.28□□□□□ -0.6
SPG11-203ENST00000535302 NSG2Q9Y328 171 aa11.28□□□□□ -0.6
SPG11-203ENST00000535302 ACAA2P42765 397 aaKnown RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms