RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 NOS1APO75052 506 aaPredicted RBP11.54□□□□□ -0.56
SF3B2-215ENST00000534307 RPP14O95059 124 aaKnown RBP11.54□□□□□ -0.56
SF3B2-215ENST00000534307 PGA5P0DJD9 388 aa11.54□□□□□ -0.56
SF3B2-215ENST00000534307 CDC42P60953 191 aa11.54□□□□□ -0.56
SF3B2-215ENST00000534307 DEFA6Q01524 100 aa11.54□□□□□ -0.56
SF3B2-215ENST00000534307 ZNF85Q03923 595 aa11.54□□□□□ -0.56
SF3B2-215ENST00000534307 ZFP1Q6P2D0 407 aa11.54□□□□□ -0.56
SF3B2-215ENST00000534307 ACP7Q6ZNF0 438 aa11.54□□□□□ -0.56
SF3B2-215ENST00000534307 C1orf122Q6ZSJ8 110 aa11.54□□□□□ -0.56
SF3B2-215ENST00000534307 LDLRAD3Q86YD5 345 aa11.54□□□□□ -0.56
SF3B2-215ENST00000534307 PRSS35Q8N3Z0 413 aa11.54□□□□□ -0.56
SF3B2-215ENST00000534307 YIPF7Q8N8F6 280 aa11.54□□□□□ -0.56
SF3B2-215ENST00000534307 ZNRF1Q8ND25 227 aa11.54□□□□□ -0.56
SF3B2-215ENST00000534307 OR10H4Q8NGA5 316 aa11.54□□□□□ -0.56
SF3B2-215ENST00000534307 TRUB1Q8WWH5 349 aaKnown RBP11.54□□□□□ -0.56
SF3B2-215ENST00000534307 RFKQ969G6 155 aa11.54□□□□□ -0.56
SF3B2-215ENST00000534307 ZDHHC16Q969W1 377 aa11.54□□□□□ -0.56
SF3B2-215ENST00000534307 TMIGD2Q96BF3 282 aa11.54□□□□□ -0.56
SF3B2-215ENST00000534307 ZNF488Q96MN9 340 aa11.54□□□□□ -0.56
SF3B2-215ENST00000534307 NRIP2Q9BQI9 281 aa11.54□□□□□ -0.56
SF3B2-215ENST00000534307 CHIAQ9BZP6 476 aa11.54□□□□□ -0.56
SF3B2-215ENST00000534307 UNKLQ9H9P5 680 aaKnown RBP11.54□□□□□ -0.56
SF3B2-215ENST00000534307 HES4Q9HCC6 221 aa11.54□□□□□ -0.56
SF3B2-215ENST00000534307 GPR173Q9NS66 373 aa11.54□□□□□ -0.56
SF3B2-215ENST00000534307 ONECUT1Q9UBC0 465 aa11.54□□□□□ -0.56
SF3B2-215ENST00000534307 PCDHGB1Q9Y5G3 927 aa11.54□□□□□ -0.56
SF3B2-215ENST00000534307 POMT1Q9Y6A1 747 aa11.54□□□□□ -0.56
SF3B2-215ENST00000534307 A6NIN4 97 aa11.53□□□□□ -0.56
SF3B2-215ENST00000534307 RNASEK-C17orf49H0YIS7 233 aa11.53□□□□□ -0.56
SF3B2-215ENST00000534307 HAAOP46952 286 aa11.53□□□□□ -0.56
SF3B2-215ENST00000534307 ALDH3A2P51648 485 aa11.53□□□□□ -0.56
SF3B2-215ENST00000534307 DLX1P56177 255 aa11.53□□□□□ -0.56
SF3B2-215ENST00000534307 ERVK11-1P61568 191 aa11.53□□□□□ -0.56
SF3B2-215ENST00000534307 SNRPGP62308 76 aaKnown RBP11.53□□□□□ -0.56
SF3B2-215ENST00000534307 ZNF573Q86YE8 665 aa11.53□□□□□ -0.56
SF3B2-215ENST00000534307 PDZD9Q8IXQ8 264 aa11.53□□□□□ -0.56
SF3B2-215ENST00000534307 CMTM4Q8IZR5 234 aa11.53□□□□□ -0.56
SF3B2-215ENST00000534307 CD177Q8N6Q3 437 aa11.53□□□□□ -0.56
SF3B2-215ENST00000534307 SSMEM1Q8WWF3 244 aa11.53□□□□□ -0.56
SF3B2-215ENST00000534307 H1FXQ92522 213 aaKnown RBP11.53□□□□□ -0.56
SF3B2-215ENST00000534307 MBOAT4Q96T53 435 aa11.53□□□□□ -0.56
SF3B2-215ENST00000534307 ELL3Q9HB65 397 aaPredicted RBP11.53□□□□□ -0.56
SF3B2-215ENST00000534307 SIRT7Q9NRC8 400 aa11.53□□□□□ -0.56
SF3B2-215ENST00000534307 FAM181BA6NEQ2 426 aa11.52□□□□□ -0.57
SF3B2-215ENST00000534307 ANKRD61A6NGH8 418 aa11.52□□□□□ -0.57
SF3B2-215ENST00000534307 M0R1W7 72 aa11.52□□□□□ -0.57
SF3B2-215ENST00000534307 ENTPD6O75354 484 aa11.52□□□□□ -0.57
SF3B2-215ENST00000534307 KIR3DL2P43630 455 aa11.52□□□□□ -0.57
SF3B2-215ENST00000534307 GABRA2P47869 451 aa11.52□□□□□ -0.57
SF3B2-215ENST00000534307 RELBQ01201 579 aa11.52□□□□□ -0.57
SF3B2-215ENST00000534307 PRB3Q04118 309 aaPredicted RBP11.52□□□□□ -0.57
SF3B2-215ENST00000534307 UBE2V2Q15819 145 aa11.52□□□□□ -0.57
SF3B2-215ENST00000534307 OCLNQ16625 522 aa11.52□□□□□ -0.57
SF3B2-215ENST00000534307 SMIM21Q3B7S5 101 aa11.52□□□□□ -0.57
SF3B2-215ENST00000534307 CALHM1Q8IU99 346 aa11.52□□□□□ -0.57
SF3B2-215ENST00000534307 C10orf67Q8IYJ2 551 aa11.52□□□□□ -0.57
SF3B2-215ENST00000534307 CBR4Q8N4T8 237 aa11.52□□□□□ -0.57
SF3B2-215ENST00000534307 IMPAD1Q9NX62 359 aa11.52□□□□□ -0.57
SF3B2-215ENST00000534307 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.52□□□□□ -0.57
SF3B2-215ENST00000534307 POLDIP2Q9Y2S7 368 aa11.52□□□□□ -0.57
SF3B2-215ENST00000534307 MMP24Q9Y5R2 645 aa11.52□□□□□ -0.57
SF3B2-215ENST00000534307 WNK1Q9H4A3 2382 aa11.52□□□□□ -0.57
SF3B2-215ENST00000534307 IGKV1-27A0A075B6S5 117 aa11.51□□□□□ -0.57
SF3B2-215ENST00000534307 TRBV23-1A0A0A0MS06 115 aa11.51□□□□□ -0.57
SF3B2-215ENST00000534307 RFPL4AA6NLU0 287 aa11.51□□□□□ -0.57
SF3B2-215ENST00000534307 POM121CA8CG34 1229 aa11.51□□□□□ -0.57
SF3B2-215ENST00000534307 RFPL4AL1F8VTS6 287 aa11.51□□□□□ -0.57
SF3B2-215ENST00000534307 SYT7O43581 403 aa11.51□□□□□ -0.57
SF3B2-215ENST00000534307 IGHV4-59P01825 116 aa11.51□□□□□ -0.57
SF3B2-215ENST00000534307 NDUFB7P17568 137 aa11.51□□□□□ -0.57
SF3B2-215ENST00000534307 GABRB1P18505 474 aa11.51□□□□□ -0.57
SF3B2-215ENST00000534307 MDKP21741 143 aaPredicted RBP11.51□□□□□ -0.57
SF3B2-215ENST00000534307 IER3P46695 156 aa11.51□□□□□ -0.57
SF3B2-215ENST00000534307 IL24Q13007 206 aa11.51□□□□□ -0.57
SF3B2-215ENST00000534307 ODF4Q2M2E3 257 aa11.51□□□□□ -0.57
SF3B2-215ENST00000534307 ZIK1Q3SY52 487 aaPredicted RBP11.51□□□□□ -0.57
SF3B2-215ENST00000534307 HCP5Q6MZN7 132 aa11.51□□□□□ -0.57
SF3B2-215ENST00000534307 FIP1L1Q6UN15 594 aaKnown RBP11.51□□□□□ -0.57
SF3B2-215ENST00000534307 SHISA2Q6UWI4 295 aa11.51□□□□□ -0.57
SF3B2-215ENST00000534307 ANGPTL5Q86XS5 388 aa11.51□□□□□ -0.57
SF3B2-215ENST00000534307 CCDC54Q8NEL0 328 aa11.51□□□□□ -0.57
SF3B2-215ENST00000534307 TMEM185AQ8NFB2 350 aa11.51□□□□□ -0.57
SF3B2-215ENST00000534307 NPRL2Q8WTW4 380 aa11.51□□□□□ -0.57
SF3B2-215ENST00000534307 PKIBQ9C010 78 aa11.51□□□□□ -0.57
SF3B2-215ENST00000534307 CHST5Q9GZS9 411 aa11.51□□□□□ -0.57
SF3B2-215ENST00000534307 METTL8Q9H825 291 aaKnown RBP11.51□□□□□ -0.57
SF3B2-215ENST00000534307 C1RLQ9NZP8 487 aa11.51□□□□□ -0.57
SF3B2-215ENST00000534307 GNG8Q9UK08 70 aa11.51□□□□□ -0.57
SF3B2-215ENST00000534307 LOC107986453A0A1B0GWG9 222 aa11.5□□□□□ -0.57
SF3B2-215ENST00000534307 NPFFO15130 113 aa11.5□□□□□ -0.57
SF3B2-215ENST00000534307 NDUFA7O95182 113 aa11.5□□□□□ -0.57
SF3B2-215ENST00000534307 OMGP23515 440 aa11.5□□□□□ -0.57
SF3B2-215ENST00000534307 PRDX2P32119 198 aa11.5□□□□□ -0.57
SF3B2-215ENST00000534307 ATP6V1E1P36543 226 aa11.5□□□□□ -0.57
SF3B2-215ENST00000534307 CEBPDP49716 269 aaPredicted RBP11.5□□□□□ -0.57
SF3B2-215ENST00000534307 RPL15P61313 204 aaKnown RBP11.5□□□□□ -0.57
SF3B2-215ENST00000534307 ACTC1P68032 377 aa11.5□□□□□ -0.57
SF3B2-215ENST00000534307 ACTA1P68133 377 aa11.5□□□□□ -0.57
SF3B2-215ENST00000534307 GUCA2AQ02747 115 aa11.5□□□□□ -0.57
SF3B2-215ENST00000534307 KLRD1Q13241 179 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms