RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 URM1Q9BTM9 101 aaKnown RBP16.99■□□□□ 0.31
CAPN1-226ENST00000533820 SRPK3Q9UPE1 567 aa16.99■□□□□ 0.31
CAPN1-226ENST00000533820 PPIHO43447 177 aaKnown RBP16.98■□□□□ 0.31
CAPN1-226ENST00000533820 TRAF3IP2O43734 574 aaPredicted RBP16.98■□□□□ 0.31
CAPN1-226ENST00000533820 GSTP1P09211 210 aaKnown RBP16.98■□□□□ 0.31
CAPN1-226ENST00000533820 DDTP30046 118 aa16.98■□□□□ 0.31
CAPN1-226ENST00000533820 CLDN17P56750 224 aa16.98■□□□□ 0.31
CAPN1-226ENST00000533820 STARD6P59095 220 aa16.98■□□□□ 0.31
CAPN1-226ENST00000533820 PLPPR5Q32ZL2 321 aa16.98■□□□□ 0.31
CAPN1-226ENST00000533820 PRSS54Q6PEW0 395 aa16.98■□□□□ 0.31
CAPN1-226ENST00000533820 SLC25A45Q8N413 288 aa16.98■□□□□ 0.31
CAPN1-226ENST00000533820 AKIRIN1Q9H9L7 192 aaPredicted RBP16.98■□□□□ 0.31
CAPN1-226ENST00000533820 OR5H15A6NDH6 313 aa16.98■□□□□ 0.31
CAPN1-226ENST00000533820 MFNGO00587 321 aa16.98■□□□□ 0.31
CAPN1-226ENST00000533820 MBTPS2O43462 519 aa16.98■□□□□ 0.31
CAPN1-226ENST00000533820 FCGR2AP12318 317 aa16.98■□□□□ 0.31
CAPN1-226ENST00000533820 TBPP20226 339 aa16.98■□□□□ 0.31
CAPN1-226ENST00000533820 F2RL1P55085 397 aa16.98■□□□□ 0.31
CAPN1-226ENST00000533820 SURF2Q15527 256 aaPredicted RBP16.98■□□□□ 0.31
CAPN1-226ENST00000533820 ZNF529Q6P280 563 aa16.98■□□□□ 0.31
CAPN1-226ENST00000533820 PRDM13Q9H4Q3 707 aa16.98■□□□□ 0.31
CAPN1-226ENST00000533820 LPAR3Q9UBY5 353 aa16.98■□□□□ 0.31
CAPN1-226ENST00000533820 FAM186AA6NE01 2351 aa16.98■□□□□ 0.31
CAPN1-226ENST00000533820 HPNP05981 417 aa16.98■□□□□ 0.31
CAPN1-226ENST00000533820 DBHP09172 617 aa16.98■□□□□ 0.31
CAPN1-226ENST00000533820 SNRPCP09234 159 aaKnown RBP16.98■□□□□ 0.31
CAPN1-226ENST00000533820 CD80P33681 288 aa16.98■□□□□ 0.31
CAPN1-226ENST00000533820 NKAIN1Q4KMZ8 207 aa16.98■□□□□ 0.31
CAPN1-226ENST00000533820 OGFOD3Q6PK18 319 aa16.98■□□□□ 0.31
CAPN1-226ENST00000533820 BRICD5Q6PL45 260 aa16.98■□□□□ 0.31
CAPN1-226ENST00000533820 OR6C1Q96RD1 312 aa16.98■□□□□ 0.31
CAPN1-226ENST00000533820 ZNF581Q9P0T4 197 aa16.98■□□□□ 0.31
CAPN1-226ENST00000533820 LSM5Q9Y4Y9 91 aaKnown RBP16.98■□□□□ 0.31
CAPN1-226ENST00000533820 MED19A0JLT2 244 aaPredicted RBP16.97■□□□□ 0.31
CAPN1-226ENST00000533820 SCGNO76038 276 aa16.97■□□□□ 0.31
CAPN1-226ENST00000533820 PJVKQ0ZLH3 352 aa16.97■□□□□ 0.31
CAPN1-226ENST00000533820 IAH1Q2TAA2 248 aaPredicted RBP16.97■□□□□ 0.31
CAPN1-226ENST00000533820 PLPP5Q8NEB5 264 aa16.97■□□□□ 0.31
CAPN1-226ENST00000533820 TAF9BQ9HBM6 251 aa16.97■□□□□ 0.31
CAPN1-226ENST00000533820 RAB18Q9NP72 206 aa16.97■□□□□ 0.31
CAPN1-226ENST00000533820 NXPH1P58417 271 aa16.97■□□□□ 0.31
CAPN1-226ENST00000533820 GAMTQ14353 236 aa16.97■□□□□ 0.31
CAPN1-226ENST00000533820 SP6Q3SY56 376 aa16.97■□□□□ 0.31
CAPN1-226ENST00000533820 S100A13Q99584 98 aa16.97■□□□□ 0.31
CAPN1-226ENST00000533820 SLC26A1Q9H2B4 701 aa16.97■□□□□ 0.31
CAPN1-226ENST00000533820 MMP26Q9NRE1 261 aa16.97■□□□□ 0.31
CAPN1-226ENST00000533820 TMEM100Q9NV29 134 aa16.97■□□□□ 0.31
CAPN1-226ENST00000533820 SHANK1Q9Y566 2161 aa16.97■□□□□ 0.31
CAPN1-226ENST00000533820 TRBV6-7A0A0A0MS04 114 aa16.96■□□□□ 0.31
CAPN1-226ENST00000533820 A0A1B0GV50 99 aa16.96■□□□□ 0.31
CAPN1-226ENST00000533820 AP4M1O00189 453 aa16.96■□□□□ 0.31
CAPN1-226ENST00000533820 IGHV2-5P01817 119 aa16.96■□□□□ 0.31
CAPN1-226ENST00000533820 FPR2P25090 351 aa16.96■□□□□ 0.31
CAPN1-226ENST00000533820 OR8G1Q15617 311 aa16.96■□□□□ 0.31
CAPN1-226ENST00000533820 VAX1Q5SQQ9 334 aa16.96■□□□□ 0.31
CAPN1-226ENST00000533820 NFAM1Q8NET5 270 aaPredicted RBP16.96■□□□□ 0.31
CAPN1-226ENST00000533820 ZNF160Q9HCG1 818 aa16.96■□□□□ 0.31
CAPN1-226ENST00000533820 C9JQL5 133 aa16.96■□□□□ 0.31
CAPN1-226ENST00000533820 ANGPTL7O43827 346 aa16.96■□□□□ 0.31
CAPN1-226ENST00000533820 GDF9O60383 454 aa16.96■□□□□ 0.31
CAPN1-226ENST00000533820 IGFBP4P22692 258 aa16.96■□□□□ 0.31
CAPN1-226ENST00000533820 RRADP55042 308 aa16.96■□□□□ 0.31
CAPN1-226ENST00000533820 TOMM40LQ969M1 308 aa16.96■□□□□ 0.31
CAPN1-226ENST00000533820 C2orf50Q96LR7 162 aa16.96■□□□□ 0.31
CAPN1-226ENST00000533820 FAM212BQ9NTI7 297 aaPredicted RBP16.96■□□□□ 0.31
CAPN1-226ENST00000533820 FAM221AA4D161 298 aa16.95■□□□□ 0.3
CAPN1-226ENST00000533820 FOLR2P14207 255 aa16.95■□□□□ 0.3
CAPN1-226ENST00000533820 OPRM1P35372 400 aa16.95■□□□□ 0.3
CAPN1-226ENST00000533820 PTGER4P35408 488 aa16.95■□□□□ 0.3
CAPN1-226ENST00000533820 UBE2V2Q15819 145 aa16.95■□□□□ 0.3
CAPN1-226ENST00000533820 C20orf196Q8IYI0 205 aa16.95■□□□□ 0.3
CAPN1-226ENST00000533820 LYZL4Q96KX0 146 aa16.95■□□□□ 0.3
CAPN1-226ENST00000533820 NRIP2Q9BQI9 281 aa16.95■□□□□ 0.3
CAPN1-226ENST00000533820 MRPL37Q9BZE1 423 aaKnown RBP16.95■□□□□ 0.3
CAPN1-226ENST00000533820 CHRNA10Q9GZZ6 450 aa16.95■□□□□ 0.3
CAPN1-226ENST00000533820 RAB33BQ9H082 229 aa16.95■□□□□ 0.3
CAPN1-226ENST00000533820 PNRC2Q9NPJ4 139 aaKnown RBP16.95■□□□□ 0.3
CAPN1-226ENST00000533820 SMCO4Q9NRQ5 59 aa16.95■□□□□ 0.3
CAPN1-226ENST00000533820 CARHSP1Q9Y2V2 147 aaKnown RBP16.95■□□□□ 0.3
CAPN1-226ENST00000533820 CSTBP04080 98 aaKnown RBP16.95■□□□□ 0.3
CAPN1-226ENST00000533820 HEXAP06865 529 aa16.95■□□□□ 0.3
CAPN1-226ENST00000533820 DAOP14920 347 aa16.95■□□□□ 0.3
CAPN1-226ENST00000533820 PPA1Q15181 289 aa16.95■□□□□ 0.3
CAPN1-226ENST00000533820 SLC5A7Q9GZV3 580 aa16.95■□□□□ 0.3
CAPN1-226ENST00000533820 RNF122Q9H9V4 155 aa16.95■□□□□ 0.3
CAPN1-226ENST00000533820 RPS10P5Q9NQ39 176 aa16.95■□□□□ 0.3
CAPN1-226ENST00000533820 DHRS7CA6NNS2 312 aa16.95■□□□□ 0.3
CAPN1-226ENST00000533820 SFTA3P0C7M3 94 aa16.95■□□□□ 0.3
CAPN1-226ENST00000533820 AGAP20933 346 aa16.95■□□□□ 0.3
CAPN1-226ENST00000533820 BATF2Q8N1L9 274 aa16.95■□□□□ 0.3
CAPN1-226ENST00000533820 DYRK2Q92630 601 aa16.95■□□□□ 0.3
CAPN1-226ENST00000533820 JSRP1Q96MG2 331 aaPredicted RBP16.95■□□□□ 0.3
CAPN1-226ENST00000533820 ZNF2Q9BSG1 426 aaPredicted RBP16.95■□□□□ 0.3
CAPN1-226ENST00000533820 MCTS1Q9ULC4 181 aaKnown RBP16.95■□□□□ 0.3
CAPN1-226ENST00000533820 WIF1Q9Y5W5 379 aa16.95■□□□□ 0.3
CAPN1-226ENST00000533820 H7C1Q1 480 aa16.94■□□□□ 0.3
CAPN1-226ENST00000533820 CELA2AP08217 269 aa16.94■□□□□ 0.3
CAPN1-226ENST00000533820 RBMXP38159 391 aaKnown RBP16.94■□□□□ 0.3
CAPN1-226ENST00000533820 PDZD11Q5EBL8 140 aa16.94■□□□□ 0.3
CAPN1-226ENST00000533820 OCSTAMPQ9BR26 566 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms