RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 A8MXK9 166 aa10□□□□□ -0.81
SSBP3-214ENST00000533209 INAFM1C9JVW0 142 aa10□□□□□ -0.81
SSBP3-214ENST00000533209 NOS1APO75052 506 aaPredicted RBP10□□□□□ -0.81
SSBP3-214ENST00000533209 ALX3O95076 343 aa10□□□□□ -0.81
SSBP3-214ENST00000533209 GYPAP02724 150 aa10□□□□□ -0.81
SSBP3-214ENST00000533209 OCM2P0CE71 109 aa10□□□□□ -0.81
SSBP3-214ENST00000533209 PGA5P0DJD9 388 aa10□□□□□ -0.81
SSBP3-214ENST00000533209 RPS2P15880 293 aaKnown RBP10□□□□□ -0.81
SSBP3-214ENST00000533209 MAP2K4P45985 399 aa10□□□□□ -0.81
SSBP3-214ENST00000533209 RBP2P50120 134 aa10□□□□□ -0.81
SSBP3-214ENST00000533209 DVL1P1P54792 670 aaPredicted RBP10□□□□□ -0.81
SSBP3-214ENST00000533209 MED22Q15528 200 aa10□□□□□ -0.81
SSBP3-214ENST00000533209 KCNJ8Q15842 424 aa10□□□□□ -0.81
SSBP3-214ENST00000533209 MICBQ29980 383 aa10□□□□□ -0.81
SSBP3-214ENST00000533209 ZNF529Q6P280 563 aa10□□□□□ -0.81
SSBP3-214ENST00000533209 CRIP3Q6Q6R5 217 aa10□□□□□ -0.81
SSBP3-214ENST00000533209 ZNF841Q6ZN19 808 aa10□□□□□ -0.81
SSBP3-214ENST00000533209 RNF144BQ7Z419 303 aa10□□□□□ -0.81
SSBP3-214ENST00000533209 GLCCI1Q86VQ1 547 aa10□□□□□ -0.81
SSBP3-214ENST00000533209 SERPINA12Q8IW75 414 aa10□□□□□ -0.81
SSBP3-214ENST00000533209 POC1AQ8NBT0 407 aa10□□□□□ -0.81
SSBP3-214ENST00000533209 OR51F2Q8NH61 342 aa10□□□□□ -0.81
SSBP3-214ENST00000533209 TMEM106AQ96A25 262 aa10□□□□□ -0.81
SSBP3-214ENST00000533209 SPSB1Q96BD6 273 aa10□□□□□ -0.81
SSBP3-214ENST00000533209 NEIL1Q96FI4 390 aaPredicted RBP10□□□□□ -0.81
SSBP3-214ENST00000533209 ZNF488Q96MN9 340 aa10□□□□□ -0.81
SSBP3-214ENST00000533209 YTHDF1Q9BYJ9 559 aaKnown RBP10□□□□□ -0.81
SSBP3-214ENST00000533209 CCDC90BQ9GZT6 254 aa10□□□□□ -0.81
SSBP3-214ENST00000533209 SNTG1Q9NSN8 517 aa10□□□□□ -0.81
SSBP3-214ENST00000533209 CTSZQ9UBR2 303 aa10□□□□□ -0.81
SSBP3-214ENST00000533209 KCNS2Q9ULS6 477 aa10□□□□□ -0.81
SSBP3-214ENST00000533209 LRCH1Q9Y2L9 728 aa10□□□□□ -0.81
SSBP3-214ENST00000533209 POLDIP2Q9Y2S7 368 aa10□□□□□ -0.81
SSBP3-214ENST00000533209 MALRD1Q5VYJ5 2156 aa9.99□□□□□ -0.81
SSBP3-214ENST00000533209 TRAV20A0A0B4J274 112 aa9.99□□□□□ -0.81
SSBP3-214ENST00000533209 ADAM20O43506 726 aa9.99□□□□□ -0.81
SSBP3-214ENST00000533209 NDUFA2O43678 99 aa9.99□□□□□ -0.81
SSBP3-214ENST00000533209 SULT1B1O43704 296 aa9.99□□□□□ -0.81
SSBP3-214ENST00000533209 FCN3O75636 299 aa9.99□□□□□ -0.81
SSBP3-214ENST00000533209 CD2P06729 351 aa9.99□□□□□ -0.81
SSBP3-214ENST00000533209 ACAA1P09110 424 aaPredicted RBP9.99□□□□□ -0.81
SSBP3-214ENST00000533209 AMY2BP19961 511 aa9.99□□□□□ -0.81
SSBP3-214ENST00000533209 GLRA1P23415 457 aa9.99□□□□□ -0.81
SSBP3-214ENST00000533209 EEF1B2P24534 225 aaKnown RBP9.99□□□□□ -0.81
SSBP3-214ENST00000533209 PITPNBP48739 271 aa9.99□□□□□ -0.81
SSBP3-214ENST00000533209 ATP1B3P54709 279 aa9.99□□□□□ -0.81
SSBP3-214ENST00000533209 MTCP1P56278 107 aa9.99□□□□□ -0.81
SSBP3-214ENST00000533209 GABARAPL2P60520 117 aa9.99□□□□□ -0.81
SSBP3-214ENST00000533209 ERVK11-1P61568 191 aa9.99□□□□□ -0.81
SSBP3-214ENST00000533209 LCN2P80188 198 aa9.99□□□□□ -0.81
SSBP3-214ENST00000533209 IL24Q13007 206 aa9.99□□□□□ -0.81
SSBP3-214ENST00000533209 Q499Y3 187 aa9.99□□□□□ -0.81
SSBP3-214ENST00000533209 ESCO2Q56NI9 601 aa9.99□□□□□ -0.81
SSBP3-214ENST00000533209 YIF1BQ5BJH7 314 aa9.99□□□□□ -0.81
SSBP3-214ENST00000533209 STUMQ69YW2 141 aa9.99□□□□□ -0.81
SSBP3-214ENST00000533209 LHFPL2Q6ZUX7 228 aa9.99□□□□□ -0.81
SSBP3-214ENST00000533209 OR5T2Q8NGG2 359 aa9.99□□□□□ -0.81
SSBP3-214ENST00000533209 OR8B3Q8NGG8 313 aa9.99□□□□□ -0.81
SSBP3-214ENST00000533209 TMEM186Q96B77 213 aa9.99□□□□□ -0.81
SSBP3-214ENST00000533209 C12orf43Q96C57 262 aaKnown RBP9.99□□□□□ -0.81
SSBP3-214ENST00000533209 ORAI1Q96D31 301 aa9.99□□□□□ -0.81
SSBP3-214ENST00000533209 OPALINQ96PE5 141 aa9.99□□□□□ -0.81
SSBP3-214ENST00000533209 SPACA5Q96QH8 159 aa9.99□□□□□ -0.81
SSBP3-214ENST00000533209 OR8B2Q96RD0 313 aa9.99□□□□□ -0.81
SSBP3-214ENST00000533209 NRIP2Q9BQI9 281 aa9.99□□□□□ -0.81
SSBP3-214ENST00000533209 HIF1ANQ9NWT6 349 aa9.99□□□□□ -0.81
SSBP3-214ENST00000533209 TMEM160Q9NX00 188 aa9.99□□□□□ -0.81
SSBP3-214ENST00000533209 MTCH1Q9NZJ7 389 aa9.99□□□□□ -0.81
SSBP3-214ENST00000533209 KAAG1Q9UBP8 84 aa9.99□□□□□ -0.81
SSBP3-214ENST00000533209 DNAJB11Q9UBS4 358 aa9.99□□□□□ -0.81
SSBP3-214ENST00000533209 POLR3KQ9Y2Y1 108 aaPredicted RBP9.99□□□□□ -0.81
SSBP3-214ENST00000533209 TRBV5-7A0A0A0MS05 114 aa9.98□□□□□ -0.81
SSBP3-214ENST00000533209 A0A1B0GW55 424 aa9.98□□□□□ -0.81
SSBP3-214ENST00000533209 PHF1O43189 567 aaPredicted RBP9.98□□□□□ -0.81
SSBP3-214ENST00000533209 MRPS14O60783 128 aaKnown RBP9.98□□□□□ -0.81
SSBP3-214ENST00000533209 FOXH1O75593 365 aa9.98□□□□□ -0.81
SSBP3-214ENST00000533209 PLATP00750 562 aa9.98□□□□□ -0.81
SSBP3-214ENST00000533209 TFF1P04155 84 aa9.98□□□□□ -0.81
SSBP3-214ENST00000533209 DUX4L2P0CJ85 424 aa9.98□□□□□ -0.81
SSBP3-214ENST00000533209 DUX4L3P0CJ86 424 aa9.98□□□□□ -0.81
SSBP3-214ENST00000533209 DUX4L4P0CJ87 422 aa9.98□□□□□ -0.81
SSBP3-214ENST00000533209 DUX4L5P0CJ88 424 aa9.98□□□□□ -0.81
SSBP3-214ENST00000533209 DUX4L6P0CJ89 424 aa9.98□□□□□ -0.81
SSBP3-214ENST00000533209 DUX4L7P0CJ90 424 aa9.98□□□□□ -0.81
SSBP3-214ENST00000533209 RAB3AP20336 220 aa9.98□□□□□ -0.81
SSBP3-214ENST00000533209 TBCEQ15813 527 aaPredicted RBP9.98□□□□□ -0.81
SSBP3-214ENST00000533209 ATPAF1Q5TC12 328 aaPredicted RBP9.98□□□□□ -0.81
SSBP3-214ENST00000533209 WDR25Q64LD2 544 aaPredicted RBP9.98□□□□□ -0.81
SSBP3-214ENST00000533209 DUX4L9Q6RFH8 374 aaPredicted RBP9.98□□□□□ -0.81
SSBP3-214ENST00000533209 ACP7Q6ZNF0 438 aa9.98□□□□□ -0.81
SSBP3-214ENST00000533209 SLC25A26Q70HW3 274 aa9.98□□□□□ -0.81
SSBP3-214ENST00000533209 NLRC3Q7RTR2 1065 aa9.98□□□□□ -0.81
SSBP3-214ENST00000533209 OR51A2Q8NGJ7 313 aa9.98□□□□□ -0.81
SSBP3-214ENST00000533209 ANGPTL6Q8NI99 470 aa9.98□□□□□ -0.81
SSBP3-214ENST00000533209 RFT1Q96AA3 541 aa9.98□□□□□ -0.81
SSBP3-214ENST00000533209 TMIGD2Q96BF3 282 aa9.98□□□□□ -0.81
SSBP3-214ENST00000533209 OR14A2Q96R54 314 aa9.98□□□□□ -0.81
SSBP3-214ENST00000533209 CCL13Q99616 98 aa9.98□□□□□ -0.81
SSBP3-214ENST00000533209 SSBP3Q9BWW4 388 aaPredicted RBP9.98□□□□□ -0.81
SSBP3-214ENST00000533209 HES4Q9HCC6 221 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms