RNA–Protein interactions for RNA: ENST00000533089.5

TGFBR3-210, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 6,455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-210ENST00000533089 PCMT1P22061 227 aa6.27□□□□□ -1.41
TGFBR3-210ENST00000533089 DUSP1P28562 367 aa6.27□□□□□ -1.41
TGFBR3-210ENST00000533089 SLC6A1P30531 599 aa6.27□□□□□ -1.41
TGFBR3-210ENST00000533089 MRPL58Q14197 206 aaKnown RBP6.27□□□□□ -1.41
TGFBR3-210ENST00000533089 NPSR1Q6W5P4 371 aa6.27□□□□□ -1.41
TGFBR3-210ENST00000533089 PTOV1Q86YD1 416 aa6.27□□□□□ -1.41
TGFBR3-210ENST00000533089 GPR150Q8NGU9 434 aa6.27□□□□□ -1.41
TGFBR3-210ENST00000533089 SPAG8Q99932 426 aaPredicted RBP6.27□□□□□ -1.41
TGFBR3-210ENST00000533089 TRGV8A0A0C4DH27 118 aa6.27□□□□□ -1.41
TGFBR3-210ENST00000533089 LINC01387J3KSC0 135 aa6.27□□□□□ -1.41
TGFBR3-210ENST00000533089 HPP00738 406 aa6.27□□□□□ -1.41
TGFBR3-210ENST00000533089 NPBWR2P48146 333 aa6.27□□□□□ -1.41
TGFBR3-210ENST00000533089 MMP16P51512 607 aa6.27□□□□□ -1.41
TGFBR3-210ENST00000533089 TRA2BP62995 288 aaKnown RBP6.27□□□□□ -1.41
TGFBR3-210ENST00000533089 OR8G2PQ6IF36 304 aa6.27□□□□□ -1.41
TGFBR3-210ENST00000533089 PARM1Q6UWI2 310 aa6.27□□□□□ -1.41
TGFBR3-210ENST00000533089 SMIM4Q8WVI0 70 aa6.27□□□□□ -1.41
TGFBR3-210ENST00000533089 SEMA6CQ9H3T2 930 aa6.27□□□□□ -1.41
TGFBR3-210ENST00000533089 IGHV3-20A0A0C4DH32 117 aa6.27□□□□□ -1.41
TGFBR3-210ENST00000533089 GYPAP02724 150 aa6.27□□□□□ -1.41
TGFBR3-210ENST00000533089 RAG2P55895 527 aa6.27□□□□□ -1.41
TGFBR3-210ENST00000533089 CATR1Q13166 79 aa6.27□□□□□ -1.41
TGFBR3-210ENST00000533089 SYPL1Q16563 259 aa6.27□□□□□ -1.41
TGFBR3-210ENST00000533089 PHLDA2Q53GA4 152 aa6.27□□□□□ -1.41
TGFBR3-210ENST00000533089 ZNF506Q5JVG8 444 aa6.27□□□□□ -1.41
TGFBR3-210ENST00000533089 OR1N1Q8NGS0 311 aa6.27□□□□□ -1.41
TGFBR3-210ENST00000533089 TSSK2Q96PF2 358 aa6.27□□□□□ -1.41
TGFBR3-210ENST00000533089 NDUFB6O95139 128 aa6.27□□□□□ -1.41
TGFBR3-210ENST00000533089 MPC2O95563 127 aa6.27□□□□□ -1.41
TGFBR3-210ENST00000533089 HPRT1P00492 218 aa6.27□□□□□ -1.41
TGFBR3-210ENST00000533089 NRASP01111 189 aa6.27□□□□□ -1.41
TGFBR3-210ENST00000533089 HRASP01112 189 aa6.27□□□□□ -1.41
TGFBR3-210ENST00000533089 KRASP01116 189 aa6.27□□□□□ -1.41
TGFBR3-210ENST00000533089 ZNF728P0DKX0 622 aa6.27□□□□□ -1.41
TGFBR3-210ENST00000533089 OR5H8P0DN80 308 aa6.27□□□□□ -1.41
TGFBR3-210ENST00000533089 HTN1P15515 57 aa6.27□□□□□ -1.41
TGFBR3-210ENST00000533089 FPR2P25090 351 aa6.27□□□□□ -1.41
TGFBR3-210ENST00000533089 PNRC1Q12796 327 aaPredicted RBP6.27□□□□□ -1.41
TGFBR3-210ENST00000533089 CTSL3PQ5NE16 218 aa6.27□□□□□ -1.41
TGFBR3-210ENST00000533089 PAQR9Q6ZVX9 377 aa6.27□□□□□ -1.41
TGFBR3-210ENST00000533089 TEX29Q8N6K0 151 aa6.27□□□□□ -1.41
TGFBR3-210ENST00000533089 OR5D18Q8NGL1 313 aa6.27□□□□□ -1.41
TGFBR3-210ENST00000533089 UBL7Q96S82 380 aaPredicted RBP6.27□□□□□ -1.41
TGFBR3-210ENST00000533089 CCL27Q9Y4X3 112 aa6.27□□□□□ -1.41
TGFBR3-210ENST00000533089 LOC100289279A0A1B0GTE1 492 aa6.26□□□□□ -1.41
TGFBR3-210ENST00000533089 ZCWPW2A0A1B0GU75 182 aa6.26□□□□□ -1.41
TGFBR3-210ENST00000533089 PLA2G10O15496 165 aa6.26□□□□□ -1.41
TGFBR3-210ENST00000533089 XRCC2O43543 280 aa6.26□□□□□ -1.41
TGFBR3-210ENST00000533089 NKX2-1P43699 371 aaPredicted RBP6.26□□□□□ -1.41
TGFBR3-210ENST00000533089 PRDX1Q06830 199 aaKnown RBP6.26□□□□□ -1.41
TGFBR3-210ENST00000533089 SSX1Q16384 188 aa6.26□□□□□ -1.41
TGFBR3-210ENST00000533089 VASH2Q86V25 355 aa6.26□□□□□ -1.41
TGFBR3-210ENST00000533089 OR5AS1Q8N127 324 aa6.26□□□□□ -1.41
TGFBR3-210ENST00000533089 C10orf126Q8N4M7 172 aa6.26□□□□□ -1.41
TGFBR3-210ENST00000533089 ZDHHC22Q8N966 263 aa6.26□□□□□ -1.41
TGFBR3-210ENST00000533089 ELSPBP1Q96BH3 223 aa6.26□□□□□ -1.41
TGFBR3-210ENST00000533089 FAM3DQ96BQ1 224 aa6.26□□□□□ -1.41
TGFBR3-210ENST00000533089 GLRX2Q9NS18 164 aa6.26□□□□□ -1.41
TGFBR3-210ENST00000533089 SCN9AQ15858 1988 aa6.26□□□□□ -1.41
TGFBR3-210ENST00000533089 FITM1A5D6W6 292 aa6.26□□□□□ -1.41
TGFBR3-210ENST00000533089 PPP6CO00743 305 aa6.26□□□□□ -1.41
TGFBR3-210ENST00000533089 ANKRD34CP0C6C1 535 aa6.26□□□□□ -1.41
TGFBR3-210ENST00000533089 HOXA5P20719 270 aa6.26□□□□□ -1.41
TGFBR3-210ENST00000533089 RGRP47804 291 aa6.26□□□□□ -1.41
TGFBR3-210ENST00000533089 SNRPGP62308 76 aaKnown RBP6.26□□□□□ -1.41
TGFBR3-210ENST00000533089 TIAL1Q01085 375 aaKnown RBP eCLIP6.26□□□□□ -1.419e-7■■■□□ 17.1
TGFBR3-210ENST00000533089 IL10RAQ13651 578 aa6.26□□□□□ -1.41
TGFBR3-210ENST00000533089 PNLIPRP3Q17RR3 467 aa6.26□□□□□ -1.41
TGFBR3-210ENST00000533089 CNTN4Q8IWV2 1026 aa6.26□□□□□ -1.41
TGFBR3-210ENST00000533089 GMPPAQ96IJ6 420 aaPredicted RBP6.26□□□□□ -1.41
TGFBR3-210ENST00000533089 TRIB1Q96RU8 372 aa6.26□□□□□ -1.41
TGFBR3-210ENST00000533089 MAP1LC3CQ9BXW4 147 aa6.26□□□□□ -1.41
TGFBR3-210ENST00000533089 ARRDC1-AS1Q9H2J1 176 aa6.26□□□□□ -1.41
TGFBR3-210ENST00000533089 WIPI2Q9Y4P8 454 aa6.26□□□□□ -1.41
TGFBR3-210ENST00000533089 TMED7-TICAM2A0A0A6YYA0 188 aa6.26□□□□□ -1.41
TGFBR3-210ENST00000533089 TCRBV5S2A0A599 114 aa6.26□□□□□ -1.41
TGFBR3-210ENST00000533089 TMEM129A0AVI4 362 aa6.26□□□□□ -1.41
TGFBR3-210ENST00000533089 HOXB3P14651 431 aaPredicted RBP6.26□□□□□ -1.41
TGFBR3-210ENST00000533089 PI3P19957 117 aa6.26□□□□□ -1.41
TGFBR3-210ENST00000533089 CD27P26842 260 aa6.26□□□□□ -1.41
TGFBR3-210ENST00000533089 RAB9AP51151 201 aa6.26□□□□□ -1.41
TGFBR3-210ENST00000533089 C17orf67Q0P5P2 114 aa6.26□□□□□ -1.41
TGFBR3-210ENST00000533089 QSER1Q2KHR3 1735 aa6.26□□□□□ -1.41
TGFBR3-210ENST00000533089 NHLRC3Q5JS37 347 aa6.26□□□□□ -1.41
TGFBR3-210ENST00000533089 MED25Q71SY5 747 aa6.26□□□□□ -1.41
TGFBR3-210ENST00000533089 SYT9Q86SS6 491 aa6.26□□□□□ -1.41
TGFBR3-210ENST00000533089 PELI3Q8N2H9 469 aa6.26□□□□□ -1.41
TGFBR3-210ENST00000533089 PRSS35Q8N3Z0 413 aa6.26□□□□□ -1.41
TGFBR3-210ENST00000533089 WDR31Q8NA23 367 aa6.26□□□□□ -1.41
TGFBR3-210ENST00000533089 BHLHE23Q8NDY6 225 aa6.26□□□□□ -1.41
TGFBR3-210ENST00000533089 TMEM186Q96B77 213 aa6.26□□□□□ -1.41
TGFBR3-210ENST00000533089 EGLN1Q9GZT9 426 aa6.26□□□□□ -1.41
TGFBR3-210ENST00000533089 CHRNA10Q9GZZ6 450 aa6.26□□□□□ -1.41
TGFBR3-210ENST00000533089 P4HTMQ9NXG6 502 aa6.26□□□□□ -1.41
TGFBR3-210ENST00000533089 TMED7Q9Y3B3 224 aa6.26□□□□□ -1.41
TGFBR3-210ENST00000533089 A0A1W2PPC1 479 aa6.26□□□□□ -1.41
TGFBR3-210ENST00000533089 ALOX12BO75342 701 aa6.26□□□□□ -1.41
TGFBR3-210ENST00000533089 VAMP5O95183 116 aa6.26□□□□□ -1.41
TGFBR3-210ENST00000533089 SOD1P00441 154 aa6.26□□□□□ -1.41
TGFBR3-210ENST00000533089 ZNF252P-AS1Q0IIN9 211 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms