RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 YTHDF1Q9BYJ9 559 aaKnown RBP12.74□□□□□ -0.37
CPSF1-210ENST00000532935 DNTTIP1Q9H147 329 aa12.74□□□□□ -0.37
CPSF1-210ENST00000532935 INPP5EQ9NRR6 644 aa12.74□□□□□ -0.37
CPSF1-210ENST00000532935 MRPS18AQ9NVS2 196 aaKnown RBP12.74□□□□□ -0.37
CPSF1-210ENST00000532935 FRRS1LQ9P0K9 344 aa12.74□□□□□ -0.37
CPSF1-210ENST00000532935 NLKQ9UBE8 527 aa12.74□□□□□ -0.37
CPSF1-210ENST00000532935 NKX6-3A6NJ46 265 aa12.73□□□□□ -0.37
CPSF1-210ENST00000532935 J3QT63 122 aa12.73□□□□□ -0.37
CPSF1-210ENST00000532935 NDUFB3O43676 98 aa12.73□□□□□ -0.37
CPSF1-210ENST00000532935 WBP4O75554 376 aaKnown RBP12.73□□□□□ -0.37
CPSF1-210ENST00000532935 CLIC3O95833 236 aa12.73□□□□□ -0.37
CPSF1-210ENST00000532935 ECDO95905 644 aaPredicted RBP12.73□□□□□ -0.37
CPSF1-210ENST00000532935 TFF1P04155 84 aa12.73□□□□□ -0.37
CPSF1-210ENST00000532935 LIPFP07098 398 aa12.73□□□□□ -0.37
CPSF1-210ENST00000532935 IGHV4-38-2P0DP08 117 aa12.73□□□□□ -0.37
CPSF1-210ENST00000532935 HAAOP46952 286 aa12.73□□□□□ -0.37
CPSF1-210ENST00000532935 TGM4P49221 684 aa12.73□□□□□ -0.37
CPSF1-210ENST00000532935 CCR9P51686 369 aa12.73□□□□□ -0.37
CPSF1-210ENST00000532935 HILS1P60008 231 aa12.73□□□□□ -0.37
CPSF1-210ENST00000532935 IKZF1Q13422 519 aa12.73□□□□□ -0.37
CPSF1-210ENST00000532935 UBE2V2Q15819 145 aa12.73□□□□□ -0.37
CPSF1-210ENST00000532935 SMN1Q16637 294 aaKnown RBP12.73□□□□□ -0.37
CPSF1-210ENST00000532935 KLHL22Q53GT1 634 aa12.73□□□□□ -0.37
CPSF1-210ENST00000532935 TMEM244Q5VVB8 128 aa12.73□□□□□ -0.37
CPSF1-210ENST00000532935 PNLDC1Q8NA58 520 aaKnown RBP12.73□□□□□ -0.37
CPSF1-210ENST00000532935 OR52I1Q8NGK6 324 aa12.73□□□□□ -0.37
CPSF1-210ENST00000532935 CYGBQ8WWM9 190 aa12.73□□□□□ -0.37
CPSF1-210ENST00000532935 TMIGD2Q96BF3 282 aa12.73□□□□□ -0.37
CPSF1-210ENST00000532935 ZNF69Q9UC07 566 aa12.73□□□□□ -0.37
CPSF1-210ENST00000532935 OR2AT4A6NND4 320 aa12.72□□□□□ -0.37
CPSF1-210ENST00000532935 ZNF879B4DU55 563 aa12.72□□□□□ -0.37
CPSF1-210ENST00000532935 SYNGR1O43759 233 aa12.72□□□□□ -0.37
CPSF1-210ENST00000532935 GATBO75879 557 aaKnown RBP12.72□□□□□ -0.37
CPSF1-210ENST00000532935 ISG15P05161 165 aa12.72□□□□□ -0.37
CPSF1-210ENST00000532935 SELLP14151 372 aa12.72□□□□□ -0.37
CPSF1-210ENST00000532935 LRRC10Q5BKY1 277 aa12.72□□□□□ -0.37
CPSF1-210ENST00000532935 ZNF788Q6ZQV5 615 aa12.72□□□□□ -0.37
CPSF1-210ENST00000532935 EGFL6Q8IUX8 553 aa12.72□□□□□ -0.37
CPSF1-210ENST00000532935 SYS1Q8N2H4 156 aa12.72□□□□□ -0.37
CPSF1-210ENST00000532935 POC1AQ8NBT0 407 aa12.72□□□□□ -0.37
CPSF1-210ENST00000532935 TRMT10AQ8TBZ6 339 aaKnown RBP12.72□□□□□ -0.37
CPSF1-210ENST00000532935 C10orf35Q96D05 121 aa12.72□□□□□ -0.37
CPSF1-210ENST00000532935 MED30Q96HR3 178 aa12.72□□□□□ -0.37
CPSF1-210ENST00000532935 ZNF488Q96MN9 340 aa12.72□□□□□ -0.37
CPSF1-210ENST00000532935 GAFA1Q96PS6 74 aa12.72□□□□□ -0.37
CPSF1-210ENST00000532935 ZNF649Q9BS31 505 aa12.72□□□□□ -0.37
CPSF1-210ENST00000532935 CHST5Q9GZS9 411 aa12.72□□□□□ -0.37
CPSF1-210ENST00000532935 ISG20L2Q9H9L3 353 aaKnown RBP12.72□□□□□ -0.37
CPSF1-210ENST00000532935 ERVK13-1Q9NX77 482 aa12.72□□□□□ -0.37
CPSF1-210ENST00000532935 RASL12Q9NYN1 266 aa12.72□□□□□ -0.37
CPSF1-210ENST00000532935 RPUSD1Q9UJJ7 312 aaKnown RBP12.72□□□□□ -0.37
CPSF1-210ENST00000532935 SLC7A11Q9UPY5 501 aa12.72□□□□□ -0.37
CPSF1-210ENST00000532935 POLDIP2Q9Y2S7 368 aa12.72□□□□□ -0.37
CPSF1-210ENST00000532935 HSPE1-MOB4S4R3N1 261 aa12.72□□□□□ -0.37
CPSF1-210ENST00000532935 IGKV1D-17A0A075B6S4 117 aa12.71□□□□□ -0.37
CPSF1-210ENST00000532935 IGHV3OR16-10A0A075B7F0 116 aa12.71□□□□□ -0.37
CPSF1-210ENST00000532935 TRAV40A0A0B4J280 105 aa12.71□□□□□ -0.37
CPSF1-210ENST00000532935 FAM230AA0A1W2PPH8 454 aa12.71□□□□□ -0.37
CPSF1-210ENST00000532935 GPR37O15354 613 aa12.71□□□□□ -0.37
CPSF1-210ENST00000532935 SIGLEC5O15389 551 aa12.71□□□□□ -0.37
CPSF1-210ENST00000532935 NOS1APO75052 506 aaPredicted RBP12.71□□□□□ -0.37
CPSF1-210ENST00000532935 TNFAIP8O95379 198 aa12.71□□□□□ -0.37
CPSF1-210ENST00000532935 SERPINA3P01011 423 aa12.71□□□□□ -0.37
CPSF1-210ENST00000532935 ACAA1P09110 424 aaPredicted RBP12.71□□□□□ -0.37
CPSF1-210ENST00000532935 PGA5P0DJD9 388 aa12.71□□□□□ -0.37
CPSF1-210ENST00000532935 PSG2P11465 335 aa12.71□□□□□ -0.37
CPSF1-210ENST00000532935 MPZP25189 248 aa12.71□□□□□ -0.37
CPSF1-210ENST00000532935 GABRA2P47869 451 aa12.71□□□□□ -0.37
CPSF1-210ENST00000532935 IL13RA1P78552 427 aa12.71□□□□□ -0.37
CPSF1-210ENST00000532935 ALKBH1Q13686 389 aaKnown RBP12.71□□□□□ -0.37
CPSF1-210ENST00000532935 DGUOKQ16854 277 aa12.71□□□□□ -0.37
CPSF1-210ENST00000532935 TUSC1Q2TAM9 212 aa12.71□□□□□ -0.37
CPSF1-210ENST00000532935 ACP7Q6ZNF0 438 aa12.71□□□□□ -0.37
CPSF1-210ENST00000532935 ANGPTL5Q86XS5 388 aa12.71□□□□□ -0.37
CPSF1-210ENST00000532935 CALHM1Q8IU99 346 aa12.71□□□□□ -0.37
CPSF1-210ENST00000532935 BCL6BQ8N143 479 aaPredicted RBP12.71□□□□□ -0.37
CPSF1-210ENST00000532935 CNIH3Q8TBE1 160 aa12.71□□□□□ -0.37
CPSF1-210ENST00000532935 NPRL2Q8WTW4 380 aa12.71□□□□□ -0.37
CPSF1-210ENST00000532935 PP6455Q8WZ26 134 aa12.71□□□□□ -0.37
CPSF1-210ENST00000532935 ADAT3Q96EY9 351 aaPredicted RBP12.71□□□□□ -0.37
CPSF1-210ENST00000532935 CNBD2Q96M20 576 aa12.71□□□□□ -0.37
CPSF1-210ENST00000532935 JMJD8Q96S16 334 aa12.71□□□□□ -0.37
CPSF1-210ENST00000532935 PCGF1Q9BSM1 259 aa12.71□□□□□ -0.37
CPSF1-210ENST00000532935 PKIBQ9C010 78 aa12.71□□□□□ -0.37
CPSF1-210ENST00000532935 FGF20Q9NP95 211 aaPredicted RBP12.71□□□□□ -0.37
CPSF1-210ENST00000532935 SCOCQ9UIL1 159 aa12.71□□□□□ -0.37
CPSF1-210ENST00000532935 ZNF222Q9UK12 451 aa12.71□□□□□ -0.37
CPSF1-210ENST00000532935 OR4C45A6NMZ5 311 aa12.7□□□□□ -0.38
CPSF1-210ENST00000532935 TOX4O94842 621 aa12.7□□□□□ -0.38
CPSF1-210ENST00000532935 PLATP00750 562 aa12.7□□□□□ -0.38
CPSF1-210ENST00000532935 SFTPBP07988 381 aa12.7□□□□□ -0.38
CPSF1-210ENST00000532935 MMP9P14780 707 aa12.7□□□□□ -0.38
CPSF1-210ENST00000532935 FUT6P51993 359 aa12.7□□□□□ -0.38
CPSF1-210ENST00000532935 BLMHQ13867 455 aa12.7□□□□□ -0.38
CPSF1-210ENST00000532935 CNN3Q15417 329 aaKnown RBP12.7□□□□□ -0.38
CPSF1-210ENST00000532935 SMIM21Q3B7S5 101 aa12.7□□□□□ -0.38
CPSF1-210ENST00000532935 METTL11BQ5VVY1 283 aa12.7□□□□□ -0.38
CPSF1-210ENST00000532935 C9orf139Q6ZV77 190 aa12.7□□□□□ -0.38
CPSF1-210ENST00000532935 ZNF676Q8N7Q3 588 aa12.7□□□□□ -0.38
CPSF1-210ENST00000532935 SIGLECL1Q8N7X8 197 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms