RNA–Protein interactions for RNA: ENST00000532463.5

CTNND1-231, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-231ENST00000532463 IL17CQ9P0M4 197 aa7.31□□□□□ -1.24
CTNND1-231ENST00000532463 USP22Q9UPT9 525 aa7.31□□□□□ -1.24
CTNND1-231ENST00000532463 MRPS2Q9Y399 296 aaKnown RBP7.31□□□□□ -1.24
CTNND1-231ENST00000532463 SOX4Q06945 474 aaPredicted RBP7.31□□□□□ -1.24
CTNND1-231ENST00000532463 SHBQ15464 509 aa7.31□□□□□ -1.24
CTNND1-231ENST00000532463 CBLN2Q8IUK8 224 aa7.31□□□□□ -1.24
CTNND1-231ENST00000532463 OR10S1Q8NGN2 331 aa7.31□□□□□ -1.24
CTNND1-231ENST00000532463 OR5R1Q8NH85 324 aa7.31□□□□□ -1.24
CTNND1-231ENST00000532463 NEURL3Q96EH8 262 aa7.31□□□□□ -1.24
CTNND1-231ENST00000532463 ALG14Q96F25 216 aa7.31□□□□□ -1.24
CTNND1-231ENST00000532463 CDCA3Q99618 268 aaPredicted RBP7.31□□□□□ -1.24
CTNND1-231ENST00000532463 IER2Q9BTL4 223 aa7.31□□□□□ -1.24
CTNND1-231ENST00000532463 DERL1Q9BUN8 251 aa7.31□□□□□ -1.24
CTNND1-231ENST00000532463 OR51M1Q9H341 326 aa7.31□□□□□ -1.24
CTNND1-231ENST00000532463 FOXJ2Q9P0K8 574 aa7.31□□□□□ -1.24
CTNND1-231ENST00000532463 TBX21Q9UL17 535 aa7.31□□□□□ -1.24
CTNND1-231ENST00000532463 HS3ST2Q9Y278 367 aa7.31□□□□□ -1.24
CTNND1-231ENST00000532463 R4GMQ9 66 aa7.31□□□□□ -1.24
CTNND1-231ENST00000532463 HEPACAM2A8MVW5 462 aa7.31□□□□□ -1.24
CTNND1-231ENST00000532463 MPDU1O75352 247 aa7.31□□□□□ -1.24
CTNND1-231ENST00000532463 GABRA1P14867 456 aa7.31□□□□□ -1.24
CTNND1-231ENST00000532463 HAAOP46952 286 aa7.31□□□□□ -1.24
CTNND1-231ENST00000532463 TMEM249Q2WGJ8 235 aa7.31□□□□□ -1.24
CTNND1-231ENST00000532463 LRRC10Q5BKY1 277 aa7.31□□□□□ -1.24
CTNND1-231ENST00000532463 SLC25A26Q70HW3 274 aa7.31□□□□□ -1.24
CTNND1-231ENST00000532463 ZNF683Q8IZ20 524 aa7.31□□□□□ -1.24
CTNND1-231ENST00000532463 TMEM99Q8N816 258 aa7.31□□□□□ -1.24
CTNND1-231ENST00000532463 FOXC2Q99958 501 aa7.31□□□□□ -1.24
CTNND1-231ENST00000532463 SFT2D2O95562 160 aa7.31□□□□□ -1.24
CTNND1-231ENST00000532463 GNG10P50151 68 aa7.31□□□□□ -1.24
CTNND1-231ENST00000532463 RAG2P55895 527 aa7.31□□□□□ -1.24
CTNND1-231ENST00000532463 PRDX1Q06830 199 aaKnown RBP7.31□□□□□ -1.24
CTNND1-231ENST00000532463 SELENBP1Q13228 472 aa7.31□□□□□ -1.24
CTNND1-231ENST00000532463 RUNX3Q13761 415 aa7.31□□□□□ -1.24
CTNND1-231ENST00000532463 NIT1Q86X76 327 aa7.31□□□□□ -1.24
CTNND1-231ENST00000532463 FADS6Q8N9I5 356 aa7.31□□□□□ -1.24
CTNND1-231ENST00000532463 STXBP6Q8NFX7 210 aa7.31□□□□□ -1.24
CTNND1-231ENST00000532463 KLRG1Q96E93 195 aa7.31□□□□□ -1.24
CTNND1-231ENST00000532463 AQP10Q96PS8 301 aa7.31□□□□□ -1.24
CTNND1-231ENST00000532463 SAP30LQ9HAJ7 183 aa7.31□□□□□ -1.24
CTNND1-231ENST00000532463 VSIG4Q9Y279 399 aa7.31□□□□□ -1.24
CTNND1-231ENST00000532463 KCNK7Q9Y2U2 307 aa7.31□□□□□ -1.24
CTNND1-231ENST00000532463 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.3□□□□□ -1.24
CTNND1-231ENST00000532463 HMSDA8MTL9 139 aa7.3□□□□□ -1.24
CTNND1-231ENST00000532463 KCNAB3O43448 404 aa7.3□□□□□ -1.24
CTNND1-231ENST00000532463 NDUFB6O95139 128 aa7.3□□□□□ -1.24
CTNND1-231ENST00000532463 GP1BAP07359 652 aa7.3□□□□□ -1.24
CTNND1-231ENST00000532463 SOD3P08294 240 aa7.3□□□□□ -1.24
CTNND1-231ENST00000532463 SEZ6L2Q6UXD5 910 aa7.3□□□□□ -1.24
CTNND1-231ENST00000532463 LILRA2Q8N149 483 aa7.3□□□□□ -1.24
CTNND1-231ENST00000532463 MDGA1Q8NFP4 955 aa7.3□□□□□ -1.24
CTNND1-231ENST00000532463 OR1B1Q8NGR6 318 aa7.3□□□□□ -1.24
CTNND1-231ENST00000532463 Q8WTZ3 238 aa7.3□□□□□ -1.24
CTNND1-231ENST00000532463 FLYWCH2Q96CP2 140 aaKnown RBP7.3□□□□□ -1.24
CTNND1-231ENST00000532463 CMC2Q9NRP2 79 aa7.3□□□□□ -1.24
CTNND1-231ENST00000532463 AUP1Q9Y679 476 aa7.3□□□□□ -1.24
CTNND1-231ENST00000532463 MBLAC1A4D2B0 266 aaPredicted RBP7.3□□□□□ -1.24
CTNND1-231ENST00000532463 NDUFB3O43676 98 aa7.3□□□□□ -1.24
CTNND1-231ENST00000532463 SCRG1O75711 98 aa7.3□□□□□ -1.24
CTNND1-231ENST00000532463 MAS1LP35410 378 aa7.3□□□□□ -1.24
CTNND1-231ENST00000532463 TNFRSF4P43489 277 aa7.3□□□□□ -1.24
CTNND1-231ENST00000532463 LPAR6P43657 344 aa7.3□□□□□ -1.24
CTNND1-231ENST00000532463 FUT6P51993 359 aa7.3□□□□□ -1.24
CTNND1-231ENST00000532463 ERV3-1Q14264 604 aa7.3□□□□□ -1.24
CTNND1-231ENST00000532463 PRTGQ2VWP7 1150 aa7.3□□□□□ -1.24
CTNND1-231ENST00000532463 XKR7Q5GH72 579 aa7.3□□□□□ -1.24
CTNND1-231ENST00000532463 ELFN2Q5R3F8 820 aa7.3□□□□□ -1.24
CTNND1-231ENST00000532463 PTRH1Q86Y79 214 aaKnown RBP7.3□□□□□ -1.24
CTNND1-231ENST00000532463 LINC00052Q96N35 136 aa7.3□□□□□ -1.24
CTNND1-231ENST00000532463 DDA1Q9BW61 102 aa7.3□□□□□ -1.24
CTNND1-231ENST00000532463 IL36GQ9NZH8 169 aa7.3□□□□□ -1.24
CTNND1-231ENST00000532463 WNT16Q9UBV4 365 aa7.3□□□□□ -1.24
CTNND1-231ENST00000532463 CLDN16Q9Y5I7 305 aa7.3□□□□□ -1.24
CTNND1-231ENST00000532463 H0YGG7 62 aa7.3□□□□□ -1.24
CTNND1-231ENST00000532463 TNFSF11O14788 317 aa7.3□□□□□ -1.24
CTNND1-231ENST00000532463 MPC2O95563 127 aa7.3□□□□□ -1.24
CTNND1-231ENST00000532463 FAM157CP0CG43 387 aa7.3□□□□□ -1.24
CTNND1-231ENST00000532463 PITX1P78337 314 aaPredicted RBP7.3□□□□□ -1.24
CTNND1-231ENST00000532463 DCAF12Q5T6F0 453 aa7.3□□□□□ -1.24
CTNND1-231ENST00000532463 MOGAT3Q86VF5 341 aa7.3□□□□□ -1.24
CTNND1-231ENST00000532463 Q8IYB0 196 aa7.3□□□□□ -1.24
CTNND1-231ENST00000532463 DPH3Q96FX2 82 aa7.3□□□□□ -1.24
CTNND1-231ENST00000532463 VIRMAQ69YN4 1812 aaKnown RBP7.3□□□□□ -1.24
CTNND1-231ENST00000532463 COL5A2P05997 1499 aaPredicted RBP7.3□□□□□ -1.24
CTNND1-231ENST00000532463 SRSF10O75494 262 aaKnown RBP7.3□□□□□ -1.24
CTNND1-231ENST00000532463 KBTBD11O94819 623 aa7.3□□□□□ -1.24
CTNND1-231ENST00000532463 HLA-DRB1P01911 266 aa7.3□□□□□ -1.24
CTNND1-231ENST00000532463 FUT3P21217 361 aa7.3□□□□□ -1.24
CTNND1-231ENST00000532463 ZNF137PP52743 207 aa7.3□□□□□ -1.24
CTNND1-231ENST00000532463 EIF3IQ13347 325 aaKnown RBP7.3□□□□□ -1.24
CTNND1-231ENST00000532463 ZNF273Q14593 569 aa7.3□□□□□ -1.24
CTNND1-231ENST00000532463 CDK5R1Q15078 307 aa7.3□□□□□ -1.24
CTNND1-231ENST00000532463 PSG5Q15238 335 aa7.3□□□□□ -1.24
CTNND1-231ENST00000532463 TAZQ16635 292 aa7.3□□□□□ -1.24
CTNND1-231ENST00000532463 TMEM65Q6PI78 240 aa7.3□□□□□ -1.24
CTNND1-231ENST00000532463 PARS2Q7L3T8 475 aaKnown RBP7.3□□□□□ -1.24
CTNND1-231ENST00000532463 ZNF418Q8TF45 676 aaPredicted RBP7.3□□□□□ -1.24
CTNND1-231ENST00000532463 TIMP4Q99727 224 aa7.3□□□□□ -1.24
CTNND1-231ENST00000532463 NPFFR1Q9GZQ6 430 aa7.3□□□□□ -1.24
CTNND1-231ENST00000532463 RNF167Q9H6Y7 350 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms