RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 ZCCHC4Q9H5U6 513 aa12.13□□□□□ -0.47
CPSF1-206ENST00000531480 SLC7A11Q9UPY5 501 aa12.13□□□□□ -0.47
CPSF1-206ENST00000531480 TLN2Q9Y4G6 2542 aa12.13□□□□□ -0.47
CPSF1-206ENST00000531480 PPIAL4EA0A075B759 164 aa12.12□□□□□ -0.47
CPSF1-206ENST00000531480 A6NLC8 198 aa12.12□□□□□ -0.47
CPSF1-206ENST00000531480 F5H0A9 414 aaPredicted RBP12.12□□□□□ -0.47
CPSF1-206ENST00000531480 PPIAL4DF5H284 164 aa12.12□□□□□ -0.47
CPSF1-206ENST00000531480 J3QT63 122 aa12.12□□□□□ -0.47
CPSF1-206ENST00000531480 AIREO43918 545 aa12.12□□□□□ -0.47
CPSF1-206ENST00000531480 IGHV2-5P01817 119 aa12.12□□□□□ -0.47
CPSF1-206ENST00000531480 CD2P06729 351 aa12.12□□□□□ -0.47
CPSF1-206ENST00000531480 OCM2P0CE71 109 aa12.12□□□□□ -0.47
CPSF1-206ENST00000531480 PPIAL4FP0DN26 164 aa12.12□□□□□ -0.47
CPSF1-206ENST00000531480 IRF2P14316 349 aa12.12□□□□□ -0.47
CPSF1-206ENST00000531480 IGFBP3P17936 291 aaPredicted RBP12.12□□□□□ -0.47
CPSF1-206ENST00000531480 FSTP19883 344 aa12.12□□□□□ -0.47
CPSF1-206ENST00000531480 PRKACBP22694 351 aa12.12□□□□□ -0.47
CPSF1-206ENST00000531480 IL2RGP31785 369 aa12.12□□□□□ -0.47
CPSF1-206ENST00000531480 IL24Q13007 206 aa12.12□□□□□ -0.47
CPSF1-206ENST00000531480 AVPI1Q5T686 147 aa12.12□□□□□ -0.47
CPSF1-206ENST00000531480 Q71RC1 249 aaPredicted RBP12.12□□□□□ -0.47
CPSF1-206ENST00000531480 BIVMQ86UB2 503 aa12.12□□□□□ -0.47
CPSF1-206ENST00000531480 MAPK1IP1LQ8NDC0 245 aa12.12□□□□□ -0.47
CPSF1-206ENST00000531480 OR13C5Q8NGS8 318 aa12.12□□□□□ -0.47
CPSF1-206ENST00000531480 TSEN15Q8WW01 171 aaKnown RBP12.12□□□□□ -0.47
CPSF1-206ENST00000531480 SF3B6Q9Y3B4 125 aaKnown RBP12.12□□□□□ -0.47
CPSF1-206ENST00000531480 PPIAL4AQ9Y536 164 aa12.12□□□□□ -0.47
CPSF1-206ENST00000531480 ZFHX3Q15911 3703 aa12.11□□□□□ -0.47
CPSF1-206ENST00000531480 NSD1Q96L73 2696 aaPredicted RBP12.11□□□□□ -0.47
CPSF1-206ENST00000531480 LGALS8O00214 317 aa12.11□□□□□ -0.47
CPSF1-206ENST00000531480 SULT1B1O43704 296 aa12.11□□□□□ -0.47
CPSF1-206ENST00000531480 RHBDL1O75783 438 aa12.11□□□□□ -0.47
CPSF1-206ENST00000531480 IGHV4-31P0DP07 118 aa12.11□□□□□ -0.47
CPSF1-206ENST00000531480 MUC1P15941 1255 aaPredicted RBP12.11□□□□□ -0.47
CPSF1-206ENST00000531480 EGR1P18146 543 aa12.11□□□□□ -0.47
CPSF1-206ENST00000531480 AZGP1P25311 298 aaKnown RBP12.11□□□□□ -0.47
CPSF1-206ENST00000531480 MAPK3P27361 379 aaPredicted RBP12.11□□□□□ -0.47
CPSF1-206ENST00000531480 HAAOP46952 286 aa12.11□□□□□ -0.47
CPSF1-206ENST00000531480 SERPINB10P48595 397 aa12.11□□□□□ -0.47
CPSF1-206ENST00000531480 RBP2P50120 134 aa12.11□□□□□ -0.47
CPSF1-206ENST00000531480 GP2P55259 537 aaKnown RBP12.11□□□□□ -0.47
CPSF1-206ENST00000531480 ERVK11-1P61568 191 aa12.11□□□□□ -0.47
CPSF1-206ENST00000531480 FAM201AQ5SY85 155 aa12.11□□□□□ -0.47
CPSF1-206ENST00000531480 CALHM1Q8IU99 346 aa12.11□□□□□ -0.47
CPSF1-206ENST00000531480 PHC2Q8IXK0 858 aa12.11□□□□□ -0.47
CPSF1-206ENST00000531480 SPICQ8N5J4 248 aa12.11□□□□□ -0.47
CPSF1-206ENST00000531480 LRRC29Q8WV35 223 aa12.11□□□□□ -0.47
CPSF1-206ENST00000531480 C12orf43Q96C57 262 aaKnown RBP12.11□□□□□ -0.47
CPSF1-206ENST00000531480 DERL3Q96Q80 235 aa12.11□□□□□ -0.47
CPSF1-206ENST00000531480 SMR3AQ99954 134 aa12.11□□□□□ -0.47
CPSF1-206ENST00000531480 TMEM246Q9BRR3 403 aa12.11□□□□□ -0.47
CPSF1-206ENST00000531480 FUNDC2Q9BWH2 189 aa12.11□□□□□ -0.47
CPSF1-206ENST00000531480 METTL17Q9H7H0 456 aaPredicted RBP12.11□□□□□ -0.47
CPSF1-206ENST00000531480 HES4Q9HCC6 221 aa12.11□□□□□ -0.47
CPSF1-206ENST00000531480 NDUFB11Q9NX14 153 aa12.11□□□□□ -0.47
CPSF1-206ENST00000531480 STUB1Q9UNE7 303 aa12.11□□□□□ -0.47
CPSF1-206ENST00000531480 CEPT1Q9Y6K0 416 aa12.11□□□□□ -0.47
CPSF1-206ENST00000531480 MALRD1Q5VYJ5 2156 aa12.11□□□□□ -0.47
CPSF1-206ENST00000531480 DOCK11Q5JSL3 2073 aa12.1□□□□□ -0.47
CPSF1-206ENST00000531480 PNMA8CA0A1B0GUJ8 204 aa12.1□□□□□ -0.47
CPSF1-206ENST00000531480 OOEPA6NGQ2 149 aa12.1□□□□□ -0.47
CPSF1-206ENST00000531480 ZNF879B4DU55 563 aa12.1□□□□□ -0.47
CPSF1-206ENST00000531480 PIN1P1O15428 100 aa12.1□□□□□ -0.47
CPSF1-206ENST00000531480 ARL6IP5O75915 188 aa12.1□□□□□ -0.47
CPSF1-206ENST00000531480 ALDOBP05062 364 aa12.1□□□□□ -0.47
CPSF1-206ENST00000531480 PGA5P0DJD9 388 aa12.1□□□□□ -0.47
CPSF1-206ENST00000531480 SOX2P48431 317 aa12.1□□□□□ -0.47
CPSF1-206ENST00000531480 HOXA4Q00056 320 aaPredicted RBP12.1□□□□□ -0.47
CPSF1-206ENST00000531480 LIPKQ5VXJ0 399 aa12.1□□□□□ -0.47
CPSF1-206ENST00000531480 HAGHLQ6PII5 290 aaPredicted RBP12.1□□□□□ -0.47
CPSF1-206ENST00000531480 DCDC5Q6ZRR9 648 aa12.1□□□□□ -0.47
CPSF1-206ENST00000531480 LHFPL2Q6ZUX7 228 aa12.1□□□□□ -0.47
CPSF1-206ENST00000531480 FAM90A1Q86YD7 464 aa12.1□□□□□ -0.47
CPSF1-206ENST00000531480 POC1AQ8NBT0 407 aa12.1□□□□□ -0.47
CPSF1-206ENST00000531480 OR13C9Q8NGT0 318 aa12.1□□□□□ -0.47
CPSF1-206ENST00000531480 ZNF671Q8TAW3 534 aa12.1□□□□□ -0.47
CPSF1-206ENST00000531480 ISOC1Q96CN7 298 aa12.1□□□□□ -0.47
CPSF1-206ENST00000531480 YIPF6Q96EC8 236 aa12.1□□□□□ -0.47
CPSF1-206ENST00000531480 BORCS8Q96FH0 119 aa12.1□□□□□ -0.47
CPSF1-206ENST00000531480 OR14A2Q96R54 314 aa12.1□□□□□ -0.47
CPSF1-206ENST00000531480 NRIP2Q9BQI9 281 aa12.1□□□□□ -0.47
CPSF1-206ENST00000531480 ZNF665Q9H7R5 613 aa12.1□□□□□ -0.47
CPSF1-206ENST00000531480 PATZ1Q9HBE1 687 aaKnown RBP12.1□□□□□ -0.47
CPSF1-206ENST00000531480 RASL12Q9NYN1 266 aa12.1□□□□□ -0.47
CPSF1-206ENST00000531480 KAAG1Q9UBP8 84 aa12.1□□□□□ -0.47
CPSF1-206ENST00000531480 POLDIP2Q9Y2S7 368 aa12.1□□□□□ -0.47
CPSF1-206ENST00000531480 POLR3KQ9Y2Y1 108 aaPredicted RBP12.1□□□□□ -0.47
CPSF1-206ENST00000531480 TRAV38-1A0A0B4J264 116 aa12.09□□□□□ -0.47
CPSF1-206ENST00000531480 FAM230AA0A1W2PPH8 454 aa12.09□□□□□ -0.47
CPSF1-206ENST00000531480 hCG_1807616A0A1W2PRN6 198 aa12.09□□□□□ -0.47
CPSF1-206ENST00000531480 CEACAM18A8MTB9 384 aa12.09□□□□□ -0.47
CPSF1-206ENST00000531480 SMAD7O15105 426 aaKnown RBP12.09□□□□□ -0.47
CPSF1-206ENST00000531480 NDUFA2O43678 99 aa12.09□□□□□ -0.47
CPSF1-206ENST00000531480 SYNGR1O43759 233 aa12.09□□□□□ -0.47
CPSF1-206ENST00000531480 CD5LO43866 347 aa12.09□□□□□ -0.47
CPSF1-206ENST00000531480 WNT2P09544 360 aa12.09□□□□□ -0.47
CPSF1-206ENST00000531480 SOX6P35712 828 aa12.09□□□□□ -0.47
CPSF1-206ENST00000531480 GZMKP49863 264 aa12.09□□□□□ -0.47
CPSF1-206ENST00000531480 ATP1B3P54709 279 aa12.09□□□□□ -0.47
CPSF1-206ENST00000531480 KCNJ8Q15842 424 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms