RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 SLC35D2Q76EJ3 337 aa5.39□□□□□ -1.55
CSDE1-213ENST00000530784 GPR141Q7Z602 305 aa5.39□□□□□ -1.55
CSDE1-213ENST00000530784 DPPA2Q7Z7J5 298 aa5.39□□□□□ -1.55
CSDE1-213ENST00000530784 WDFY1Q8IWB7 410 aa5.39□□□□□ -1.55
CSDE1-213ENST00000530784 MSRB3Q8IXL7 192 aa5.39□□□□□ -1.55
CSDE1-213ENST00000530784 C10orf111Q8N326 155 aa5.39□□□□□ -1.55
CSDE1-213ENST00000530784 POM121L12Q8N7R1 296 aa5.39□□□□□ -1.55
CSDE1-213ENST00000530784 ICA1LQ8NDH6 482 aa5.39□□□□□ -1.55
CSDE1-213ENST00000530784 SLC30A7Q8NEW0 376 aa5.39□□□□□ -1.55
CSDE1-213ENST00000530784 OR4M2Q8NGB6 313 aa5.39□□□□□ -1.55
CSDE1-213ENST00000530784 OR4C15Q8NGM1 316 aa5.39□□□□□ -1.55
CSDE1-213ENST00000530784 OR6X1Q8NH79 312 aa5.39□□□□□ -1.55
CSDE1-213ENST00000530784 SGMS2Q8NHU3 365 aa5.39□□□□□ -1.55
CSDE1-213ENST00000530784 SYNPRQ8TBG9 265 aa5.39□□□□□ -1.55
CSDE1-213ENST00000530784 TMEM54Q969K7 222 aa5.39□□□□□ -1.55
CSDE1-213ENST00000530784 SUCNR1Q9BXA5 334 aa5.39□□□□□ -1.55
CSDE1-213ENST00000530784 PARD6BQ9BYG5 372 aa5.39□□□□□ -1.55
CSDE1-213ENST00000530784 PARLQ9H300 379 aa5.39□□□□□ -1.55
CSDE1-213ENST00000530784 OR51B6Q9H340 312 aa5.39□□□□□ -1.55
CSDE1-213ENST00000530784 C1orf198Q9H425 327 aa5.39□□□□□ -1.55
CSDE1-213ENST00000530784 TMEM38AQ9H6F2 299 aa5.39□□□□□ -1.55
CSDE1-213ENST00000530784 TMEM38BQ9NVV0 291 aa5.39□□□□□ -1.55
CSDE1-213ENST00000530784 SLCO1C1Q9NYB5 712 aa5.39□□□□□ -1.55
CSDE1-213ENST00000530784 NKIRAS1Q9NYS0 192 aa5.39□□□□□ -1.55
CSDE1-213ENST00000530784 GLTPQ9NZD2 209 aa5.39□□□□□ -1.55
CSDE1-213ENST00000530784 TAAR3PQ9P1P4 343 aa5.39□□□□□ -1.55
CSDE1-213ENST00000530784 CTSZQ9UBR2 303 aa5.39□□□□□ -1.55
CSDE1-213ENST00000530784 ANGPT4Q9Y264 503 aa5.39□□□□□ -1.55
CSDE1-213ENST00000530784 USH1CQ9Y6N9 552 aa5.39□□□□□ -1.55
CSDE1-213ENST00000530784 NBEAL1Q6ZS30 2694 aa5.39□□□□□ -1.55
CSDE1-213ENST00000530784 ANK2Q01484 3957 aa5.39□□□□□ -1.55
CSDE1-213ENST00000530784 PLCE1Q9P212 2302 aa5.39□□□□□ -1.55
CSDE1-213ENST00000530784 YLPM1P49750 1951 aaKnown RBP5.38□□□□□ -1.55
CSDE1-213ENST00000530784 IGLV3-9A0A075B6K5 115 aa5.38□□□□□ -1.55
CSDE1-213ENST00000530784 IGHV1-69-2A0A0G2JMI3 117 aa5.38□□□□□ -1.55
CSDE1-213ENST00000530784 IQCMA0A1B0GVH7 501 aa5.38□□□□□ -1.55
CSDE1-213ENST00000530784 TMEM89A2RUT3 159 aa5.38□□□□□ -1.55
CSDE1-213ENST00000530784 EVPLLA8MZ36 301 aa5.38□□□□□ -1.55
CSDE1-213ENST00000530784 SRRM5B3KS81 715 aa5.38□□□□□ -1.55
CSDE1-213ENST00000530784 J3QLI3 93 aa5.38□□□□□ -1.55
CSDE1-213ENST00000530784 SLC1A7O00341 560 aa5.38□□□□□ -1.55
CSDE1-213ENST00000530784 KPNA4O00629 521 aaPredicted RBP5.38□□□□□ -1.55
CSDE1-213ENST00000530784 RNF13O43567 381 aa5.38□□□□□ -1.55
CSDE1-213ENST00000530784 CHP2O43745 196 aa5.38□□□□□ -1.55
CSDE1-213ENST00000530784 TPST2O60704 377 aa5.38□□□□□ -1.55
CSDE1-213ENST00000530784 FMO6PO60774 539 aa5.38□□□□□ -1.55
CSDE1-213ENST00000530784 FCGR3BO75015 233 aa5.38□□□□□ -1.55
CSDE1-213ENST00000530784 MFN2O95140 757 aa5.38□□□□□ -1.55
CSDE1-213ENST00000530784 SNAP29O95721 258 aa5.38□□□□□ -1.55
CSDE1-213ENST00000530784 PTHP01270 115 aa5.38□□□□□ -1.55
CSDE1-213ENST00000530784 IGHG1P01857 330 aa5.38□□□□□ -1.55
CSDE1-213ENST00000530784 UMPSP11172 480 aa5.38□□□□□ -1.55
CSDE1-213ENST00000530784 CCL2P13500 99 aa5.38□□□□□ -1.55
CSDE1-213ENST00000530784 ZNF250P15622 560 aa5.38□□□□□ -1.55
CSDE1-213ENST00000530784 CAPGP40121 348 aa5.38□□□□□ -1.55
CSDE1-213ENST00000530784 CRYBB2P43320 205 aa5.38□□□□□ -1.55
CSDE1-213ENST00000530784 MRPL19P49406 292 aaKnown RBP5.38□□□□□ -1.55
CSDE1-213ENST00000530784 SLC18A1P54219 525 aa5.38□□□□□ -1.55
CSDE1-213ENST00000530784 ERVS71-1P61550 626 aa5.38□□□□□ -1.55
CSDE1-213ENST00000530784 GLO1Q04760 184 aa5.38□□□□□ -1.55
CSDE1-213ENST00000530784 MOGQ16653 247 aa5.38□□□□□ -1.55
CSDE1-213ENST00000530784 TBC1D28Q2M2D7 210 aa5.38□□□□□ -1.55
CSDE1-213ENST00000530784 HFEQ30201 348 aa5.38□□□□□ -1.55
CSDE1-213ENST00000530784 PAGE3Q5JUK9 113 aa5.38□□□□□ -1.55
CSDE1-213ENST00000530784 TMEM53Q6P2H8 277 aa5.38□□□□□ -1.55
CSDE1-213ENST00000530784 TTC33Q6PID6 262 aaPredicted RBP5.38□□□□□ -1.55
CSDE1-213ENST00000530784 EPGNQ6UW88 154 aa5.38□□□□□ -1.55
CSDE1-213ENST00000530784 NHLRC1Q6VVB1 395 aa5.38□□□□□ -1.55
CSDE1-213ENST00000530784 SLC16A14Q7RTX9 510 aa5.38□□□□□ -1.55
CSDE1-213ENST00000530784 BPIFB2Q8N4F0 458 aa5.38□□□□□ -1.55
CSDE1-213ENST00000530784 SMYD1Q8NB12 490 aa5.38□□□□□ -1.55
CSDE1-213ENST00000530784 OR4K5Q8NGD3 323 aa5.38□□□□□ -1.55
CSDE1-213ENST00000530784 C11orf40Q8WZ69 217 aa5.38□□□□□ -1.55
CSDE1-213ENST00000530784 TIMD4Q96H15 378 aa5.38□□□□□ -1.55
CSDE1-213ENST00000530784 SLC25A44Q96H78 314 aaPredicted RBP5.38□□□□□ -1.55
CSDE1-213ENST00000530784 TSPAN32Q96QS1 320 aa5.38□□□□□ -1.55
CSDE1-213ENST00000530784 MCHR1Q99705 422 aa5.38□□□□□ -1.55
CSDE1-213ENST00000530784 ARHGDIGQ99819 225 aa5.38□□□□□ -1.55
CSDE1-213ENST00000530784 SH3GL3Q99963 347 aa5.38□□□□□ -1.55
CSDE1-213ENST00000530784 WFDC6Q9BQY6 131 aa5.38□□□□□ -1.55
CSDE1-213ENST00000530784 BCL2L14Q9BZR8 327 aa5.38□□□□□ -1.55
CSDE1-213ENST00000530784 IKZF5Q9H5V7 419 aa5.38□□□□□ -1.55
CSDE1-213ENST00000530784 GPN1Q9HCN4 374 aaPredicted RBP5.38□□□□□ -1.55
CSDE1-213ENST00000530784 SLCO1B3Q9NPD5 702 aa5.38□□□□□ -1.55
CSDE1-213ENST00000530784 NANSQ9NR45 359 aa5.38□□□□□ -1.55
CSDE1-213ENST00000530784 CHCHD3Q9NX63 227 aaKnown RBP5.38□□□□□ -1.55
CSDE1-213ENST00000530784 CCDC167Q9P0B6 97 aa5.38□□□□□ -1.55
CSDE1-213ENST00000530784 VAPAQ9P0L0 249 aa5.38□□□□□ -1.55
CSDE1-213ENST00000530784 ZNF229Q9UJW7 825 aa5.38□□□□□ -1.55
CSDE1-213ENST00000530784 GMEB1Q9Y692 573 aa5.38□□□□□ -1.55
CSDE1-213ENST00000530784 AGRNO00468 2067 aa5.38□□□□□ -1.55
CSDE1-213ENST00000530784 ARFGEF3Q5TH69 2177 aa5.38□□□□□ -1.55
CSDE1-213ENST00000530784 SVEP1Q4LDE5 3571 aa5.37□□□□□ -1.55
CSDE1-213ENST00000530784 TRAV18A0A075B6X5 111 aa5.37□□□□□ -1.55
CSDE1-213ENST00000530784 TRAV34A0A0B4J273 112 aa5.37□□□□□ -1.55
CSDE1-213ENST00000530784 ISPDA4D126 451 aa5.37□□□□□ -1.55
CSDE1-213ENST00000530784 C5orf52A6NGY3 159 aa5.37□□□□□ -1.55
CSDE1-213ENST00000530784 ACOD1A6NK06 481 aa5.37□□□□□ -1.55
CSDE1-213ENST00000530784 CPSF4LA6NMK7 179 aaKnown RBP5.37□□□□□ -1.55
CSDE1-213ENST00000530784 IGHV2-5P01817 119 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms