RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 CTAG2O75638 210 aa7.55□□□□□ -1.2
CTNND1-227ENST00000530748 HRASP01112 189 aa7.55□□□□□ -1.2
CTNND1-227ENST00000530748 LPAR6P43657 344 aa7.55□□□□□ -1.2
CTNND1-227ENST00000530748 KLF3P57682 345 aaPredicted RBP7.55□□□□□ -1.2
CTNND1-227ENST00000530748 CLPPQ16740 277 aaPredicted RBP7.55□□□□□ -1.2
CTNND1-227ENST00000530748 C4orf17Q53FE4 359 aa7.55□□□□□ -1.2
CTNND1-227ENST00000530748 PDZD11Q5EBL8 140 aa7.55□□□□□ -1.2
CTNND1-227ENST00000530748 HES3Q5TGS1 186 aa7.55□□□□□ -1.2
CTNND1-227ENST00000530748 RELL2Q8NC24 303 aaPredicted RBP7.55□□□□□ -1.2
CTNND1-227ENST00000530748 OR13G1Q8NGZ3 307 aa7.55□□□□□ -1.2
CTNND1-227ENST00000530748 CRISPLD2Q9H0B8 497 aa7.55□□□□□ -1.2
CTNND1-227ENST00000530748 TMED3Q9Y3Q3 217 aa7.55□□□□□ -1.2
CTNND1-227ENST00000530748 RER1O15258 196 aa7.55□□□□□ -1.2
CTNND1-227ENST00000530748 DUS4LO95620 317 aaKnown RBP7.55□□□□□ -1.2
CTNND1-227ENST00000530748 FGF9P31371 208 aaPredicted RBP7.55□□□□□ -1.2
CTNND1-227ENST00000530748 DEGS2Q6QHC5 323 aa7.55□□□□□ -1.2
CTNND1-227ENST00000530748 MSRB3Q8IXL7 192 aa7.55□□□□□ -1.2
CTNND1-227ENST00000530748 LRRC29Q8WV35 223 aa7.55□□□□□ -1.2
CTNND1-227ENST00000530748 GPR87Q9BY21 358 aa7.55□□□□□ -1.2
CTNND1-227ENST00000530748 S100A8P05109 93 aa7.55□□□□□ -1.2
CTNND1-227ENST00000530748 CT62P0C5K7 136 aa7.55□□□□□ -1.2
CTNND1-227ENST00000530748 ZNF32P17041 273 aa7.55□□□□□ -1.2
CTNND1-227ENST00000530748 CALCRP30988 508 aa7.55□□□□□ -1.2
CTNND1-227ENST00000530748 MLF1P58340 268 aa7.55□□□□□ -1.2
CTNND1-227ENST00000530748 FFAR4Q5NUL3 377 aa7.55□□□□□ -1.2
CTNND1-227ENST00000530748 FAM27D1Q5T7N8 215 aa7.55□□□□□ -1.2
CTNND1-227ENST00000530748 COMMD1Q8N668 190 aa7.55□□□□□ -1.2
CTNND1-227ENST00000530748 WDR89Q96FK6 387 aaPredicted RBP7.55□□□□□ -1.2
CTNND1-227ENST00000530748 PECRQ9BY49 303 aa7.55□□□□□ -1.2
CTNND1-227ENST00000530748 UCK1Q9HA47 277 aa7.55□□□□□ -1.2
CTNND1-227ENST00000530748 MMP26Q9NRE1 261 aa7.55□□□□□ -1.2
CTNND1-227ENST00000530748 QSER1Q2KHR3 1735 aa7.55□□□□□ -1.2
CTNND1-227ENST00000530748 DRD3P35462 400 aa7.55□□□□□ -1.2
CTNND1-227ENST00000530748 PMP22Q01453 160 aa7.55□□□□□ -1.2
CTNND1-227ENST00000530748 PWWP2BQ6NUJ5 590 aa7.55□□□□□ -1.2
CTNND1-227ENST00000530748 TMEM108Q6UXF1 575 aa7.55□□□□□ -1.2
CTNND1-227ENST00000530748 RPEQ96AT9 228 aa7.55□□□□□ -1.2
CTNND1-227ENST00000530748 ZNF764Q96H86 408 aaPredicted RBP7.55□□□□□ -1.2
CTNND1-227ENST00000530748 TMEM147Q9BVK8 224 aa7.55□□□□□ -1.2
CTNND1-227ENST00000530748 ZNF768Q9H5H4 540 aaKnown RBP7.55□□□□□ -1.2
CTNND1-227ENST00000530748 LHX9Q9NQ69 397 aa7.55□□□□□ -1.2
CTNND1-227ENST00000530748 ZNF275Q9NSD4 429 aaPredicted RBP7.55□□□□□ -1.2
CTNND1-227ENST00000530748 SIRT3Q9NTG7 399 aaPredicted RBP7.55□□□□□ -1.2
CTNND1-227ENST00000530748 DEFB108AA8MXU0 73 aa7.54□□□□□ -1.2
CTNND1-227ENST00000530748 M0R296 226 aa7.54□□□□□ -1.2
CTNND1-227ENST00000530748 PPIHO43447 177 aaKnown RBP7.54□□□□□ -1.2
CTNND1-227ENST00000530748 WNT1P04628 370 aa7.54□□□□□ -1.2
CTNND1-227ENST00000530748 PGA3P0DJD8 388 aa7.54□□□□□ -1.2
CTNND1-227ENST00000530748 PJVKQ0ZLH3 352 aa7.54□□□□□ -1.2
CTNND1-227ENST00000530748 MOGAT2Q3SYC2 334 aa7.54□□□□□ -1.2
CTNND1-227ENST00000530748 PRR27Q6MZM9 219 aa7.54□□□□□ -1.2
CTNND1-227ENST00000530748 OR4F17Q8NGA8 305 aa7.54□□□□□ -1.2
CTNND1-227ENST00000530748 OR6X1Q8NH79 312 aa7.54□□□□□ -1.2
CTNND1-227ENST00000530748 NUBPLQ8TB37 319 aa7.54□□□□□ -1.2
CTNND1-227ENST00000530748 CA5BP1Q8WTZ4 195 aa7.54□□□□□ -1.2
CTNND1-227ENST00000530748 WDR61Q9GZS3 305 aaKnown RBP7.54□□□□□ -1.2
CTNND1-227ENST00000530748 ZNF586Q9NXT0 402 aa7.54□□□□□ -1.2
CTNND1-227ENST00000530748 C9orf170A2RU37 121 aa7.54□□□□□ -1.2
CTNND1-227ENST00000530748 C5orf67F2Z3F1 127 aa7.54□□□□□ -1.2
CTNND1-227ENST00000530748 CDK2AP1O14519 115 aa7.54□□□□□ -1.2
CTNND1-227ENST00000530748 FCGR3BO75015 233 aa7.54□□□□□ -1.2
CTNND1-227ENST00000530748 SCO1O75880 301 aa7.54□□□□□ -1.2
CTNND1-227ENST00000530748 OPRK1P41145 380 aa7.54□□□□□ -1.2
CTNND1-227ENST00000530748 CDKN2AP42771 156 aaKnown RBP7.54□□□□□ -1.2
CTNND1-227ENST00000530748 PCBP3P57721 371 aaKnown RBP7.54□□□□□ -1.2
CTNND1-227ENST00000530748 SUMO1P63165 101 aaKnown RBP7.54□□□□□ -1.2
CTNND1-227ENST00000530748 RHBDD2Q6NTF9 364 aa7.54□□□□□ -1.2
CTNND1-227ENST00000530748 ADAM5Q6NVV9 412 aa7.54□□□□□ -1.2
CTNND1-227ENST00000530748 TEX261Q6UWH6 196 aa7.54□□□□□ -1.2
CTNND1-227ENST00000530748 MYPOPQ86VE0 399 aaPredicted RBP7.54□□□□□ -1.2
CTNND1-227ENST00000530748 DHRS9Q9BPW9 319 aa7.54□□□□□ -1.2
CTNND1-227ENST00000530748 SF3B5Q9BWJ5 86 aaKnown RBP7.54□□□□□ -1.2
CTNND1-227ENST00000530748 NAA60Q9H7X0 242 aa7.54□□□□□ -1.2
CTNND1-227ENST00000530748 RHOFQ9HBH0 211 aa7.54□□□□□ -1.2
CTNND1-227ENST00000530748 U3KQ87 197 aa7.54□□□□□ -1.2
CTNND1-227ENST00000530748 AKR7A2O43488 359 aa7.54□□□□□ -1.2
CTNND1-227ENST00000530748 IGHA2P01877 340 aa7.54□□□□□ -1.2
CTNND1-227ENST00000530748 ZP3P21754 424 aa7.54□□□□□ -1.2
CTNND1-227ENST00000530748 RAB40CQ96S21 281 aa7.54□□□□□ -1.2
CTNND1-227ENST00000530748 FAAP24Q9BTP7 215 aa7.54□□□□□ -1.2
CTNND1-227ENST00000530748 OR2D2Q9H210 308 aa7.54□□□□□ -1.2
CTNND1-227ENST00000530748 YTHDF2Q9Y5A9 579 aaKnown RBP7.54□□□□□ -1.2
CTNND1-227ENST00000530748 ZNF320A2RRD8 509 aa7.54□□□□□ -1.2
CTNND1-227ENST00000530748 HOXB3P14651 431 aaPredicted RBP7.54□□□□□ -1.2
CTNND1-227ENST00000530748 CPN1P15169 458 aa7.54□□□□□ -1.2
CTNND1-227ENST00000530748 CD82P27701 267 aa7.54□□□□□ -1.2
CTNND1-227ENST00000530748 TPPP2P59282 170 aa7.54□□□□□ -1.2
CTNND1-227ENST00000530748 XAF1Q6GPH4 301 aa7.54□□□□□ -1.2
CTNND1-227ENST00000530748 ZNF429Q86V71 674 aa7.54□□□□□ -1.2
CTNND1-227ENST00000530748 RAB1BQ9H0U4 201 aa7.54□□□□□ -1.2
CTNND1-227ENST00000530748 UQCC1Q9NVA1 299 aa7.54□□□□□ -1.2
CTNND1-227ENST00000530748 PSG11Q9UQ72 335 aa7.54□□□□□ -1.2
CTNND1-227ENST00000530748 CST2P09228 141 aa7.54□□□□□ -1.2
CTNND1-227ENST00000530748 NTF3P20783 257 aa7.54□□□□□ -1.2
CTNND1-227ENST00000530748 ERVFC1-1P60608 527 aa7.54□□□□□ -1.2
CTNND1-227ENST00000530748 SLC38A11Q08AI6 406 aa7.54□□□□□ -1.2
CTNND1-227ENST00000530748 DMRTC1Q5HYR2 192 aa7.54□□□□□ -1.2
CTNND1-227ENST00000530748 BTNL3Q6UXE8 466 aa7.54□□□□□ -1.2
CTNND1-227ENST00000530748 VASH2Q86V25 355 aa7.54□□□□□ -1.2
CTNND1-227ENST00000530748 CABLES2Q9BTV7 478 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms