RNA–Protein interactions for RNA: ENST00000529355.1

CTR9-204, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-204ENST00000529355 NAMPTP43490 491 aa2.46□□□□□ -2.02
CTR9-204ENST00000529355 ERFP50548 548 aa2.46□□□□□ -2.02
CTR9-204ENST00000529355 C21orf59P57076 290 aa2.46□□□□□ -2.02
CTR9-204ENST00000529355 CXCR4P61073 352 aa2.46□□□□□ -2.02
CTR9-204ENST00000529355 PSME3P61289 254 aa2.46□□□□□ -2.02
CTR9-204ENST00000529355 MRPS22P82650 360 aaKnown RBP2.46□□□□□ -2.02
CTR9-204ENST00000529355 MXD1Q05195 221 aa2.46□□□□□ -2.02
CTR9-204ENST00000529355 LOXL1Q08397 574 aaPredicted RBP2.46□□□□□ -2.02
CTR9-204ENST00000529355 PRPSAP1Q14558 356 aa2.46□□□□□ -2.02
CTR9-204ENST00000529355 HIKESHIQ53FT3 197 aa2.46□□□□□ -2.02
CTR9-204ENST00000529355 HSD17B12Q53GQ0 312 aa2.46□□□□□ -2.02
CTR9-204ENST00000529355 BEX5Q5H9J7 111 aa2.46□□□□□ -2.02
CTR9-204ENST00000529355 DNLZQ5SXM8 178 aa2.46□□□□□ -2.02
CTR9-204ENST00000529355 FBXW9Q5XUX1 488 aa2.46□□□□□ -2.02
CTR9-204ENST00000529355 PLCXD3Q63HM9 321 aa2.46□□□□□ -2.02
CTR9-204ENST00000529355 SLC25A25Q6KCM7 469 aa2.46□□□□□ -2.02
CTR9-204ENST00000529355 ARL9Q6T311 187 aa2.46□□□□□ -2.02
CTR9-204ENST00000529355 FAM151BQ6UXP7 276 aa2.46□□□□□ -2.02
CTR9-204ENST00000529355 SNX20Q7Z614 316 aa2.46□□□□□ -2.02
CTR9-204ENST00000529355 RIBC1Q8N443 379 aaPredicted RBP2.46□□□□□ -2.02
CTR9-204ENST00000529355 STX19Q8N4C7 294 aa2.46□□□□□ -2.02
CTR9-204ENST00000529355 OR5D18Q8NGL1 313 aa2.46□□□□□ -2.02
CTR9-204ENST00000529355 OR5M1Q8NGP8 315 aa2.46□□□□□ -2.02
CTR9-204ENST00000529355 OR10J6PQ8NGY7 276 aa2.46□□□□□ -2.02
CTR9-204ENST00000529355 OR5B3Q8NH48 314 aa2.46□□□□□ -2.02
CTR9-204ENST00000529355 STOML3Q8TAV4 291 aa2.46□□□□□ -2.02
CTR9-204ENST00000529355 TMEM203Q969S6 136 aa2.46□□□□□ -2.02
CTR9-204ENST00000529355 TMBIM1Q969X1 311 aa2.46□□□□□ -2.02
CTR9-204ENST00000529355 MRGPRFQ96AM1 343 aa2.46□□□□□ -2.02
CTR9-204ENST00000529355 CREB3L1Q96BA8 519 aa2.46□□□□□ -2.02
CTR9-204ENST00000529355 CCDC124Q96CT7 223 aaKnown RBP2.46□□□□□ -2.02
CTR9-204ENST00000529355 PIK3IP1Q96FE7 263 aa2.46□□□□□ -2.02
CTR9-204ENST00000529355 MRPL48Q96GC5 212 aaKnown RBP2.46□□□□□ -2.02
CTR9-204ENST00000529355 PRRT1Q99946 306 aa2.46□□□□□ -2.02
CTR9-204ENST00000529355 AIF1LQ9BQI0 150 aa2.46□□□□□ -2.02
CTR9-204ENST00000529355 PDCD10Q9BUL8 212 aa2.46□□□□□ -2.02
CTR9-204ENST00000529355 SLC25A2Q9BXI2 301 aa2.46□□□□□ -2.02
CTR9-204ENST00000529355 MRPS26Q9BYN8 205 aaKnown RBP2.46□□□□□ -2.02
CTR9-204ENST00000529355 TM6SF2Q9BZW4 377 aa2.46□□□□□ -2.02
CTR9-204ENST00000529355 NEUROG2Q9H2A3 272 aa2.46□□□□□ -2.02
CTR9-204ENST00000529355 Q9H521 79 aa2.46□□□□□ -2.02
CTR9-204ENST00000529355 ISYNA1Q9NPH2 558 aa2.46□□□□□ -2.02
CTR9-204ENST00000529355 DDX19AQ9NUU7 478 aaKnown RBP2.46□□□□□ -2.02
CTR9-204ENST00000529355 COA4Q9NYJ1 87 aa2.46□□□□□ -2.02
CTR9-204ENST00000529355 SHPKQ9UHJ6 478 aa2.46□□□□□ -2.02
CTR9-204ENST00000529355 ENPP5Q9UJA9 477 aa2.46□□□□□ -2.02
CTR9-204ENST00000529355 IKZF2Q9UKS7 526 aa2.46□□□□□ -2.02
CTR9-204ENST00000529355 GUCA1BQ9UMX6 200 aa2.46□□□□□ -2.02
CTR9-204ENST00000529355 ING4Q9UNL4 249 aa2.46□□□□□ -2.02
CTR9-204ENST00000529355 STARD10Q9Y365 291 aa2.46□□□□□ -2.02
CTR9-204ENST00000529355 NDUFAF1Q9Y375 327 aa2.46□□□□□ -2.02
CTR9-204ENST00000529355 UTP11Q9Y3A2 253 aaKnown RBP2.46□□□□□ -2.02
CTR9-204ENST00000529355 RFNGQ9Y644 331 aa2.46□□□□□ -2.02
CTR9-204ENST00000529355 ALG5Q9Y673 324 aa2.46□□□□□ -2.02
CTR9-204ENST00000529355 OTOFQ9HC10 1997 aa2.46□□□□□ -2.02
CTR9-204ENST00000529355 MAP3K1Q13233 1512 aa2.46□□□□□ -2.02
CTR9-204ENST00000529355 JCADQ9P266 1359 aa2.46□□□□□ -2.02
CTR9-204ENST00000529355 TRPM1Q7Z4N2 1603 aa2.46□□□□□ -2.02
CTR9-204ENST00000529355 SYNMO15061 1565 aa2.45□□□□□ -2.02
CTR9-204ENST00000529355 BRWD3Q6RI45 1802 aa2.45□□□□□ -2.02
CTR9-204ENST00000529355 TUBGCP6Q96RT7 1819 aa2.45□□□□□ -2.02
CTR9-204ENST00000529355 ZNF609O15014 1411 aa2.45□□□□□ -2.02
CTR9-204ENST00000529355 PIK3C2GO75747 1445 aa2.45□□□□□ -2.02
CTR9-204ENST00000529355 ADGRL3Q9HAR2 1447 aa2.45□□□□□ -2.02
CTR9-204ENST00000529355 MYH2Q9UKX2 1941 aa2.45□□□□□ -2.02
CTR9-204ENST00000529355 FAM240BA0A1B0GVZ2 78 aa2.45□□□□□ -2.02
CTR9-204ENST00000529355 SLC5A10A0PJK1 596 aa2.45□□□□□ -2.02
CTR9-204ENST00000529355 TMEM238C9JI98 176 aa2.45□□□□□ -2.02
CTR9-204ENST00000529355 M0QZ92 97 aa2.45□□□□□ -2.02
CTR9-204ENST00000529355 ZBTB5O15062 677 aa2.45□□□□□ -2.02
CTR9-204ENST00000529355 RBFOX2O43251 390 aaKnown RBP eCLIP2.45□□□□□ -2.02
CTR9-204ENST00000529355 SOX15O60248 233 aa2.45□□□□□ -2.02
CTR9-204ENST00000529355 PLIN3O60664 434 aa2.45□□□□□ -2.02
CTR9-204ENST00000529355 SCN2BO60939 215 aa2.45□□□□□ -2.02
CTR9-204ENST00000529355 GATBO75879 557 aaKnown RBP2.45□□□□□ -2.02
CTR9-204ENST00000529355 SULT1C4O75897 302 aa2.45□□□□□ -2.02
CTR9-204ENST00000529355 MPZL1O95297 269 aa2.45□□□□□ -2.02
CTR9-204ENST00000529355 TRAPPC2P0DI81 140 aa2.45□□□□□ -2.02
CTR9-204ENST00000529355 TRAPPC2BP0DI82 140 aa2.45□□□□□ -2.02
CTR9-204ENST00000529355 IGHV1-8P0DP01 117 aa2.45□□□□□ -2.02
CTR9-204ENST00000529355 CCL2P13500 99 aa2.45□□□□□ -2.02
CTR9-204ENST00000529355 NQO2P16083 231 aa2.45□□□□□ -2.02
CTR9-204ENST00000529355 ZNF43P17038 809 aa2.45□□□□□ -2.02
CTR9-204ENST00000529355 ERP29P30040 261 aaKnown RBP2.45□□□□□ -2.02
CTR9-204ENST00000529355 CCR7P32248 378 aa2.45□□□□□ -2.02
CTR9-204ENST00000529355 CA5AP35218 305 aa2.45□□□□□ -2.02
CTR9-204ENST00000529355 UGT2B10P36537 528 aa2.45□□□□□ -2.02
CTR9-204ENST00000529355 ARR3P36575 388 aa2.45□□□□□ -2.02
CTR9-204ENST00000529355 AQP2P41181 271 aa2.45□□□□□ -2.02
CTR9-204ENST00000529355 CRYBB2P43320 205 aa2.45□□□□□ -2.02
CTR9-204ENST00000529355 MAGEA3P43357 314 aa2.45□□□□□ -2.02
CTR9-204ENST00000529355 CAPZBP47756 277 aa2.45□□□□□ -2.02
CTR9-204ENST00000529355 KCNJ3P48549 501 aa2.45□□□□□ -2.02
CTR9-204ENST00000529355 AKR1D1P51857 326 aa2.45□□□□□ -2.02
CTR9-204ENST00000529355 EMP2P54851 167 aa2.45□□□□□ -2.02
CTR9-204ENST00000529355 ACTBP60709 375 aa2.45□□□□□ -2.02
CTR9-204ENST00000529355 RPL23AP62750 156 aaKnown RBP2.45□□□□□ -2.02
CTR9-204ENST00000529355 ACTG1P63261 375 aa2.45□□□□□ -2.02
CTR9-204ENST00000529355 IFITM2Q01629 132 aa2.45□□□□□ -2.02
CTR9-204ENST00000529355 SLC25A11Q02978 314 aaKnown RBP2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms