RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 ZP1P60852 638 aa10.22□□□□□ -0.77
USF1-208ENST00000528768 UBE2MP61081 183 aaKnown RBP10.22□□□□□ -0.77
USF1-208ENST00000528768 RAB14P61106 215 aa10.22□□□□□ -0.77
USF1-208ENST00000528768 SNRPD2P62316 118 aaKnown RBP10.22□□□□□ -0.77
USF1-208ENST00000528768 RPS27AP62979 156 aaKnown RBP10.22□□□□□ -0.77
USF1-208ENST00000528768 DHODHQ02127 395 aa10.22□□□□□ -0.77
USF1-208ENST00000528768 HYAL4Q2M3T9 481 aa10.22□□□□□ -0.77
USF1-208ENST00000528768 SLC22A6Q4U2R8 563 aa10.22□□□□□ -0.77
USF1-208ENST00000528768 ZBTB37Q5TC79 503 aa10.22□□□□□ -0.77
USF1-208ENST00000528768 LAMTOR1Q6IAA8 161 aa10.22□□□□□ -0.77
USF1-208ENST00000528768 ZNF774Q6NX45 483 aa10.22□□□□□ -0.77
USF1-208ENST00000528768 SEZ6L2Q6UXD5 910 aa10.22□□□□□ -0.77
USF1-208ENST00000528768 LINC00696Q6ZRV3 163 aa10.22□□□□□ -0.77
USF1-208ENST00000528768 LHFPL2Q6ZUX7 228 aa10.22□□□□□ -0.77
USF1-208ENST00000528768 TMED4Q7Z7H5 227 aa10.22□□□□□ -0.77
USF1-208ENST00000528768 ZNF100Q8IYN0 542 aa10.22□□□□□ -0.77
USF1-208ENST00000528768 FTMTQ8N4E7 242 aa10.22□□□□□ -0.77
USF1-208ENST00000528768 ARRDC1Q8N5I2 433 aa10.22□□□□□ -0.77
USF1-208ENST00000528768 TMEM178AQ8NBL3 297 aa10.22□□□□□ -0.77
USF1-208ENST00000528768 UXS1Q8NBZ7 420 aa10.22□□□□□ -0.77
USF1-208ENST00000528768 OR4D10Q8NGI6 311 aa10.22□□□□□ -0.77
USF1-208ENST00000528768 OR4K15Q8NH41 348 aa10.22□□□□□ -0.77
USF1-208ENST00000528768 SGK3Q96BR1 496 aa10.22□□□□□ -0.77
USF1-208ENST00000528768 ZNF775Q96BV0 537 aaPredicted RBP10.22□□□□□ -0.77
USF1-208ENST00000528768 LYZL4Q96KX0 146 aa10.22□□□□□ -0.77
USF1-208ENST00000528768 NKX3-1Q99801 234 aaPredicted RBP10.22□□□□□ -0.77
USF1-208ENST00000528768 TTTY12Q9BZ98 90 aa10.22□□□□□ -0.77
USF1-208ENST00000528768 OR2H1Q9GZK4 316 aa10.22□□□□□ -0.77
USF1-208ENST00000528768 TINAGL1Q9GZM7 467 aaPredicted RBP10.22□□□□□ -0.77
USF1-208ENST00000528768 ZMAT3Q9HA38 289 aaKnown RBP10.22□□□□□ -0.77
USF1-208ENST00000528768 ELL3Q9HB65 397 aaPredicted RBP10.22□□□□□ -0.77
USF1-208ENST00000528768 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.22□□□□□ -0.77
USF1-208ENST00000528768 CSAG2Q9Y5P2 127 aa10.22□□□□□ -0.77
USF1-208ENST00000528768 TRAV17A0A0B4J275 112 aa10.21□□□□□ -0.77
USF1-208ENST00000528768 FAM166BA8MTA8 275 aa10.21□□□□□ -0.77
USF1-208ENST00000528768 RPL36A-HNRNPH2H7BZ11 118 aa10.21□□□□□ -0.77
USF1-208ENST00000528768 L7N2F9 121 aa10.21□□□□□ -0.77
USF1-208ENST00000528768 M0R233 179 aa10.21□□□□□ -0.77
USF1-208ENST00000528768 GOSR2O14653 212 aa10.21□□□□□ -0.77
USF1-208ENST00000528768 SLC22A5O76082 557 aa10.21□□□□□ -0.77
USF1-208ENST00000528768 F10P00742 488 aa10.21□□□□□ -0.77
USF1-208ENST00000528768 CSTBP04080 98 aaKnown RBP10.21□□□□□ -0.77
USF1-208ENST00000528768 ZNF735P0CB33 412 aa10.21□□□□□ -0.77
USF1-208ENST00000528768 COX5BP10606 129 aa10.21□□□□□ -0.77
USF1-208ENST00000528768 NAT2P11245 290 aa10.21□□□□□ -0.77
USF1-208ENST00000528768 B4GALT1P15291 398 aa10.21□□□□□ -0.77
USF1-208ENST00000528768 GNB3P16520 340 aa10.21□□□□□ -0.77
USF1-208ENST00000528768 FAHP16930 419 aa10.21□□□□□ -0.77
USF1-208ENST00000528768 ZNF708P17019 499 aa10.21□□□□□ -0.77
USF1-208ENST00000528768 NAT1P18440 290 aa10.21□□□□□ -0.77
USF1-208ENST00000528768 CD34P28906 385 aa10.21□□□□□ -0.77
USF1-208ENST00000528768 AGTR1P30556 359 aa10.21□□□□□ -0.77
USF1-208ENST00000528768 ECI1P42126 302 aa10.21□□□□□ -0.77
USF1-208ENST00000528768 OR3A3P47888 321 aa10.21□□□□□ -0.77
USF1-208ENST00000528768 OR3A2P47893 321 aa10.21□□□□□ -0.77
USF1-208ENST00000528768 MEOX1P50221 254 aa10.21□□□□□ -0.77
USF1-208ENST00000528768 LHX2P50458 406 aa10.21□□□□□ -0.77
USF1-208ENST00000528768 ATP1B3P54709 279 aa10.21□□□□□ -0.77
USF1-208ENST00000528768 MTCP1P56278 107 aa10.21□□□□□ -0.77
USF1-208ENST00000528768 KRTAP10-9P60411 292 aa10.21□□□□□ -0.77
USF1-208ENST00000528768 PPIAP62937 165 aaKnown RBP10.21□□□□□ -0.77
USF1-208ENST00000528768 SRYQ05066 204 aa10.21□□□□□ -0.77
USF1-208ENST00000528768 SLC10A1Q14973 349 aa10.21□□□□□ -0.77
USF1-208ENST00000528768 KRTAP27-1Q3LI81 207 aa10.21□□□□□ -0.77
USF1-208ENST00000528768 Q5BKY6 102 aa10.21□□□□□ -0.77
USF1-208ENST00000528768 VAX1Q5SQQ9 334 aa10.21□□□□□ -0.77
USF1-208ENST00000528768 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.21□□□□□ -0.77
USF1-208ENST00000528768 FAM89BQ8N5H3 189 aa10.21□□□□□ -0.77
USF1-208ENST00000528768 OR5H2Q8NGV7 314 aa10.21□□□□□ -0.77
USF1-208ENST00000528768 BORCS8Q96FH0 119 aa10.21□□□□□ -0.77
USF1-208ENST00000528768 SIGLEC12Q96PQ1 595 aa10.21□□□□□ -0.77
USF1-208ENST00000528768 ALKBH3Q96Q83 286 aaPredicted RBP10.21□□□□□ -0.77
USF1-208ENST00000528768 OCSTAMPQ9BR26 566 aa10.21□□□□□ -0.77
USF1-208ENST00000528768 TM2D1Q9BX74 207 aa10.21□□□□□ -0.77
USF1-208ENST00000528768 ACKR4Q9NPB9 350 aa10.21□□□□□ -0.77
USF1-208ENST00000528768 B3GNT2Q9NY97 397 aa10.21□□□□□ -0.77
USF1-208ENST00000528768 COMMD9Q9P000 198 aa10.21□□□□□ -0.77
USF1-208ENST00000528768 MAP1AP78559 2803 aaPredicted RBP10.21□□□□□ -0.78
USF1-208ENST00000528768 IGKV1-9A0A0C4DH69 117 aa10.2□□□□□ -0.78
USF1-208ENST00000528768 HMSDA8MTL9 139 aa10.2□□□□□ -0.78
USF1-208ENST00000528768 CSN2P05814 226 aa10.2□□□□□ -0.78
USF1-208ENST00000528768 TMEM225BP0DP42 221 aa10.2□□□□□ -0.78
USF1-208ENST00000528768 FOSL1P15407 271 aa10.2□□□□□ -0.78
USF1-208ENST00000528768 MGMTP16455 207 aa10.2□□□□□ -0.78
USF1-208ENST00000528768 AMY2BP19961 511 aa10.2□□□□□ -0.78
USF1-208ENST00000528768 NFYAP23511 347 aaPredicted RBP10.2□□□□□ -0.78
USF1-208ENST00000528768 ARR3P36575 388 aa10.2□□□□□ -0.78
USF1-208ENST00000528768 HTR2BP41595 481 aa10.2□□□□□ -0.78
USF1-208ENST00000528768 RBP2P50120 134 aa10.2□□□□□ -0.78
USF1-208ENST00000528768 FUT6P51993 359 aa10.2□□□□□ -0.78
USF1-208ENST00000528768 CLDN18P56856 261 aa10.2□□□□□ -0.78
USF1-208ENST00000528768 ARG2P78540 354 aa10.2□□□□□ -0.78
USF1-208ENST00000528768 PSG4Q00888 419 aa10.2□□□□□ -0.78
USF1-208ENST00000528768 PLP2Q04941 152 aa10.2□□□□□ -0.78
USF1-208ENST00000528768 MALLQ13021 153 aa10.2□□□□□ -0.78
USF1-208ENST00000528768 RSU1Q15404 277 aa10.2□□□□□ -0.78
USF1-208ENST00000528768 RSPO1Q2MKA7 263 aaPredicted RBP10.2□□□□□ -0.78
USF1-208ENST00000528768 ATPAF1Q5TC12 328 aaPredicted RBP10.2□□□□□ -0.78
USF1-208ENST00000528768 GALNTL5Q7Z4T8 443 aa10.2□□□□□ -0.78
USF1-208ENST00000528768 CD163Q86VB7 1156 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms