RNA–Protein interactions for RNA: ENST00000528563.5

HIF3A-211, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2

Gene HIF3A, Length 1,486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-211ENST00000528563 DUX4L5P0CJ88 424 aa13.95□□□□□ -0.18
HIF3A-211ENST00000528563 DUX4L6P0CJ89 424 aa13.95□□□□□ -0.18
HIF3A-211ENST00000528563 DUX4L7P0CJ90 424 aa13.95□□□□□ -0.18
HIF3A-211ENST00000528563 EPHA1P21709 976 aa13.95□□□□□ -0.18
HIF3A-211ENST00000528563 FUT6P51993 359 aa13.95□□□□□ -0.18
HIF3A-211ENST00000528563 GBX2P52951 348 aaPredicted RBP13.95□□□□□ -0.18
HIF3A-211ENST00000528563 SCGB2A2Q13296 93 aa13.95□□□□□ -0.18
HIF3A-211ENST00000528563 KLF17Q5JT82 389 aaPredicted RBP13.95□□□□□ -0.18
HIF3A-211ENST00000528563 DUX4L9Q6RFH8 374 aaPredicted RBP13.95□□□□□ -0.18
HIF3A-211ENST00000528563 UTS2BQ765I0 119 aa13.95□□□□□ -0.18
HIF3A-211ENST00000528563 SLC36A1Q7Z2H8 476 aa13.95□□□□□ -0.18
HIF3A-211ENST00000528563 CALHM1Q8IU99 346 aa13.95□□□□□ -0.18
HIF3A-211ENST00000528563 POC1AQ8NBT0 407 aa13.95□□□□□ -0.18
HIF3A-211ENST00000528563 OR51A4Q8NGJ6 313 aa13.95□□□□□ -0.18
HIF3A-211ENST00000528563 HAVCR2Q8TDQ0 301 aa13.95□□□□□ -0.18
HIF3A-211ENST00000528563 GGHQ92820 318 aa13.95□□□□□ -0.18
HIF3A-211ENST00000528563 TMIGD2Q96BF3 282 aa13.95□□□□□ -0.18
HIF3A-211ENST00000528563 NLKQ9UBE8 527 aa13.95□□□□□ -0.18
HIF3A-211ENST00000528563 DUX4Q9UBX2 424 aa13.95□□□□□ -0.18
HIF3A-211ENST00000528563 CAB39Q9Y376 341 aaPredicted RBP13.95□□□□□ -0.18
HIF3A-211ENST00000528563 IGKV1D-17A0A075B6S4 117 aa13.94□□□□□ -0.18
HIF3A-211ENST00000528563 IGKV1-27A0A075B6S5 117 aa13.94□□□□□ -0.18
HIF3A-211ENST00000528563 IGKV1-9A0A0C4DH69 117 aa13.94□□□□□ -0.18
HIF3A-211ENST00000528563 FAM230AA0A1W2PPH8 454 aa13.94□□□□□ -0.18
HIF3A-211ENST00000528563 ENSAO43768 121 aaKnown RBP13.94□□□□□ -0.18
HIF3A-211ENST00000528563 ECDO95905 644 aaPredicted RBP13.94□□□□□ -0.18
HIF3A-211ENST00000528563 RPSAP08865 295 aaKnown RBP13.94□□□□□ -0.18
HIF3A-211ENST00000528563 PGA5P0DJD9 388 aa13.94□□□□□ -0.18
HIF3A-211ENST00000528563 PSG2P11465 335 aa13.94□□□□□ -0.18
HIF3A-211ENST00000528563 ACP7Q6ZNF0 438 aa13.94□□□□□ -0.18
HIF3A-211ENST00000528563 BTN2A1Q7KYR7 527 aa13.94□□□□□ -0.18
HIF3A-211ENST00000528563 FGFRL1Q8N441 504 aa13.94□□□□□ -0.18
HIF3A-211ENST00000528563 FAM216BQ8N7L0 139 aa13.94□□□□□ -0.18
HIF3A-211ENST00000528563 ZNF676Q8N7Q3 588 aa13.94□□□□□ -0.18
HIF3A-211ENST00000528563 DNAAF1Q8NEP3 725 aa13.94□□□□□ -0.18
HIF3A-211ENST00000528563 TRMT10AQ8TBZ6 339 aaKnown RBP13.94□□□□□ -0.18
HIF3A-211ENST00000528563 NPRL2Q8WTW4 380 aa13.94□□□□□ -0.18
HIF3A-211ENST00000528563 UPRTQ96BW1 309 aa13.94□□□□□ -0.18
HIF3A-211ENST00000528563 MED30Q96HR3 178 aa13.94□□□□□ -0.18
HIF3A-211ENST00000528563 ZNF488Q96MN9 340 aa13.94□□□□□ -0.18
HIF3A-211ENST00000528563 NRIP2Q9BQI9 281 aa13.94□□□□□ -0.18
HIF3A-211ENST00000528563 PKIBQ9C010 78 aa13.94□□□□□ -0.18
HIF3A-211ENST00000528563 OCEL1Q9H607 264 aa13.94□□□□□ -0.18
HIF3A-211ENST00000528563 PLCXD1Q9NUJ7 323 aa13.94□□□□□ -0.18
HIF3A-211ENST00000528563 ZNF222Q9UK12 451 aa13.94□□□□□ -0.18
HIF3A-211ENST00000528563 TMEM212A6NML5 194 aa13.93□□□□□ -0.18
HIF3A-211ENST00000528563 GPR37O15354 613 aa13.93□□□□□ -0.18
HIF3A-211ENST00000528563 NDUFB3O43676 98 aa13.93□□□□□ -0.18
HIF3A-211ENST00000528563 TFF1P04155 84 aa13.93□□□□□ -0.18
HIF3A-211ENST00000528563 GTF2A1P52655 376 aaPredicted RBP13.93□□□□□ -0.18
HIF3A-211ENST00000528563 ERVK11-1P61568 191 aa13.93□□□□□ -0.18
HIF3A-211ENST00000528563 IL24Q13007 206 aa13.93□□□□□ -0.18
HIF3A-211ENST00000528563 TUSC1Q2TAM9 212 aa13.93□□□□□ -0.18
HIF3A-211ENST00000528563 OR2G6Q5TZ20 316 aa13.93□□□□□ -0.18
HIF3A-211ENST00000528563 TMPRSS11AQ6ZMR5 421 aa13.93□□□□□ -0.18
HIF3A-211ENST00000528563 TMEM80Q96HE8 168 aa13.93□□□□□ -0.18
HIF3A-211ENST00000528563 GAFA1Q96PS6 74 aa13.93□□□□□ -0.18
HIF3A-211ENST00000528563 HES4Q9HCC6 221 aa13.93□□□□□ -0.18
HIF3A-211ENST00000528563 CLEC2DQ9UHP7 191 aa13.93□□□□□ -0.18
HIF3A-211ENST00000528563 NUP50Q9UKX7 468 aa13.93□□□□□ -0.18
HIF3A-211ENST00000528563 POLDIP2Q9Y2S7 368 aa13.93□□□□□ -0.18
HIF3A-211ENST00000528563 EXOSC1Q9Y3B2 195 aaKnown RBP13.93□□□□□ -0.18
HIF3A-211ENST00000528563 A0A0A6YYJ9 748 aa13.93□□□□□ -0.18
HIF3A-211ENST00000528563 TRBV2A0A0J9YWF9 115 aa13.93□□□□□ -0.18
HIF3A-211ENST00000528563 SIGLEC5O15389 551 aa13.93□□□□□ -0.18
HIF3A-211ENST00000528563 TCF21O43680 179 aa13.93□□□□□ -0.18
HIF3A-211ENST00000528563 SELLP14151 372 aa13.93□□□□□ -0.18
HIF3A-211ENST00000528563 ATF1P18846 271 aa13.93□□□□□ -0.18
HIF3A-211ENST00000528563 FGF12P61328 243 aa13.93□□□□□ -0.18
HIF3A-211ENST00000528563 IL13RA1P78552 427 aa13.93□□□□□ -0.18
HIF3A-211ENST00000528563 SRSF2Q01130 221 aaKnown RBP13.93□□□□□ -0.18
HIF3A-211ENST00000528563 ST3GAL4Q11206 333 aa13.93□□□□□ -0.18
HIF3A-211ENST00000528563 DGUOKQ16854 277 aa13.93□□□□□ -0.18
HIF3A-211ENST00000528563 CCDC58Q4VC31 144 aa13.93□□□□□ -0.18
HIF3A-211ENST00000528563 XAF1Q6GPH4 301 aa13.93□□□□□ -0.18
HIF3A-211ENST00000528563 PNLDC1Q8NA58 520 aaKnown RBP13.93□□□□□ -0.18
HIF3A-211ENST00000528563 ZNF485Q8NCK3 441 aa13.93□□□□□ -0.18
HIF3A-211ENST00000528563 LY6G5BQ8NDX9 201 aa13.93□□□□□ -0.18
HIF3A-211ENST00000528563 OR13C3Q8NGS6 347 aa13.93□□□□□ -0.18
HIF3A-211ENST00000528563 OR5AK2Q8NH90 309 aa13.93□□□□□ -0.18
HIF3A-211ENST00000528563 RPS4Y2Q8TD47 263 aa13.93□□□□□ -0.18
HIF3A-211ENST00000528563 TMEM158Q8WZ71 300 aa13.93□□□□□ -0.18
HIF3A-211ENST00000528563 ST8SIA4Q92187 359 aa13.93□□□□□ -0.18
HIF3A-211ENST00000528563 SDSLQ96GA7 329 aa13.93□□□□□ -0.18
HIF3A-211ENST00000528563 PDCD1LG2Q9BQ51 273 aa13.93□□□□□ -0.18
HIF3A-211ENST00000528563 BABAM2Q9NXR7 383 aa13.93□□□□□ -0.18
HIF3A-211ENST00000528563 PSORS1C1Q9UIG5 152 aa13.93□□□□□ -0.18
HIF3A-211ENST00000528563 RPUSD1Q9UJJ7 312 aaKnown RBP13.93□□□□□ -0.18
HIF3A-211ENST00000528563 MAB21L2Q9Y586 359 aa13.93□□□□□ -0.18
HIF3A-211ENST00000528563 EFCAB10A6NFE3 127 aa13.92□□□□□ -0.18
HIF3A-211ENST00000528563 ZNF879B4DU55 563 aa13.92□□□□□ -0.18
HIF3A-211ENST00000528563 XPNPEP2O43895 674 aa13.92□□□□□ -0.18
HIF3A-211ENST00000528563 CCDC159P0C7I6 412 aa13.92□□□□□ -0.18
HIF3A-211ENST00000528563 PIPP12273 146 aaPredicted RBP13.92□□□□□ -0.18
HIF3A-211ENST00000528563 ZNF20P17024 532 aa13.92□□□□□ -0.18
HIF3A-211ENST00000528563 PRKACBP22694 351 aa13.92□□□□□ -0.18
HIF3A-211ENST00000528563 IKZF1Q13422 519 aa13.92□□□□□ -0.18
HIF3A-211ENST00000528563 SMIM21Q3B7S5 101 aa13.92□□□□□ -0.18
HIF3A-211ENST00000528563 LRRC10Q5BKY1 277 aa13.92□□□□□ -0.18
HIF3A-211ENST00000528563 ARMCX4Q5H9R4 360 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms