RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 GAFA1Q96PS6 74 aa10.01□□□□□ -0.81
TRAPPC4-209ENST00000528230 PCGF1Q9BSM1 259 aa10.01□□□□□ -0.81
TRAPPC4-209ENST00000528230 DCTN5Q9BTE1 182 aa10.01□□□□□ -0.81
TRAPPC4-209ENST00000528230 PKIBQ9C010 78 aa10.01□□□□□ -0.81
TRAPPC4-209ENST00000528230 PRDM13Q9H4Q3 707 aa10.01□□□□□ -0.81
TRAPPC4-209ENST00000528230 ESM1Q9NQ30 184 aa10.01□□□□□ -0.81
TRAPPC4-209ENST00000528230 INPP5EQ9NRR6 644 aa10.01□□□□□ -0.81
TRAPPC4-209ENST00000528230 ACOXLQ9NUZ1 547 aa10.01□□□□□ -0.81
TRAPPC4-209ENST00000528230 AASSQ9UDR5 926 aa10.01□□□□□ -0.81
TRAPPC4-209ENST00000528230 ZNF222Q9UK12 451 aa10.01□□□□□ -0.81
TRAPPC4-209ENST00000528230 RPL36Q9Y3U8 105 aaKnown RBP10.01□□□□□ -0.81
TRAPPC4-209ENST00000528230 IGKV1D-17A0A075B6S4 117 aa10□□□□□ -0.81
TRAPPC4-209ENST00000528230 A0A1B0GW55 424 aa10□□□□□ -0.81
TRAPPC4-209ENST00000528230 TMEM89A2RUT3 159 aa10□□□□□ -0.81
TRAPPC4-209ENST00000528230 A6NIN4 97 aa10□□□□□ -0.81
TRAPPC4-209ENST00000528230 CLDN34H7C241 214 aa10□□□□□ -0.81
TRAPPC4-209ENST00000528230 IGHA1P01876 353 aa10□□□□□ -0.81
TRAPPC4-209ENST00000528230 HTR1AP08908 422 aa10□□□□□ -0.81
TRAPPC4-209ENST00000528230 DUX4L2P0CJ85 424 aa10□□□□□ -0.81
TRAPPC4-209ENST00000528230 DUX4L3P0CJ86 424 aa10□□□□□ -0.81
TRAPPC4-209ENST00000528230 DUX4L4P0CJ87 422 aa10□□□□□ -0.81
TRAPPC4-209ENST00000528230 DUX4L5P0CJ88 424 aa10□□□□□ -0.81
TRAPPC4-209ENST00000528230 DUX4L6P0CJ89 424 aa10□□□□□ -0.81
TRAPPC4-209ENST00000528230 DUX4L7P0CJ90 424 aa10□□□□□ -0.81
TRAPPC4-209ENST00000528230 PGA5P0DJD9 388 aa10□□□□□ -0.81
TRAPPC4-209ENST00000528230 PRTN3P24158 256 aa10□□□□□ -0.81
TRAPPC4-209ENST00000528230 FUT6P51993 359 aa10□□□□□ -0.81
TRAPPC4-209ENST00000528230 ARF6P62330 175 aa10□□□□□ -0.81
TRAPPC4-209ENST00000528230 UBA52P62987 128 aaKnown RBP10□□□□□ -0.81
TRAPPC4-209ENST00000528230 IL24Q13007 206 aa10□□□□□ -0.81
TRAPPC4-209ENST00000528230 MRPL28Q13084 256 aaKnown RBP10□□□□□ -0.81
TRAPPC4-209ENST00000528230 IKZF1Q13422 519 aa10□□□□□ -0.81
TRAPPC4-209ENST00000528230 UBE2V2Q15819 145 aa10□□□□□ -0.81
TRAPPC4-209ENST00000528230 DGUOKQ16854 277 aa10□□□□□ -0.81
TRAPPC4-209ENST00000528230 SMIM21Q3B7S5 101 aa10□□□□□ -0.81
TRAPPC4-209ENST00000528230 KLHL22Q53GT1 634 aa10□□□□□ -0.81
TRAPPC4-209ENST00000528230 DUX4L9Q6RFH8 374 aaPredicted RBP10□□□□□ -0.81
TRAPPC4-209ENST00000528230 C1orf122Q6ZSJ8 110 aa10□□□□□ -0.81
TRAPPC4-209ENST00000528230 CMTM4Q8IZR5 234 aa10□□□□□ -0.81
TRAPPC4-209ENST00000528230 KIR3DL3Q8N743 410 aa10□□□□□ -0.81
TRAPPC4-209ENST00000528230 PACRGLQ8N7B6 248 aa10□□□□□ -0.81
TRAPPC4-209ENST00000528230 HAVCR2Q8TDQ0 301 aa10□□□□□ -0.81
TRAPPC4-209ENST00000528230 PP6455Q8WZ26 134 aa10□□□□□ -0.81
TRAPPC4-209ENST00000528230 PELI1Q96FA3 418 aa10□□□□□ -0.81
TRAPPC4-209ENST00000528230 ZNF48Q96MX3 618 aaPredicted RBP10□□□□□ -0.81
TRAPPC4-209ENST00000528230 TBX15Q96SF7 602 aa10□□□□□ -0.81
TRAPPC4-209ENST00000528230 CHST5Q9GZS9 411 aa10□□□□□ -0.81
TRAPPC4-209ENST00000528230 FRRS1LQ9P0K9 344 aa10□□□□□ -0.81
TRAPPC4-209ENST00000528230 DUX4Q9UBX2 424 aa10□□□□□ -0.81
TRAPPC4-209ENST00000528230 SLC25A10Q9UBX3 287 aaPredicted RBP10□□□□□ -0.81
TRAPPC4-209ENST00000528230 IGHV3OR16-10A0A075B7F0 116 aa9.99□□□□□ -0.81
TRAPPC4-209ENST00000528230 CENPVL3A0A0U1RRI6 287 aa9.99□□□□□ -0.81
TRAPPC4-209ENST00000528230 LOC107986453A0A1B0GWG9 222 aa9.99□□□□□ -0.81
TRAPPC4-209ENST00000528230 J3QLW9 94 aa9.99□□□□□ -0.81
TRAPPC4-209ENST00000528230 SYNGR1O43759 233 aa9.99□□□□□ -0.81
TRAPPC4-209ENST00000528230 SFTPBP07988 381 aa9.99□□□□□ -0.81
TRAPPC4-209ENST00000528230 ZNF19P17023 458 aa9.99□□□□□ -0.81
TRAPPC4-209ENST00000528230 GABRA2P47869 451 aa9.99□□□□□ -0.81
TRAPPC4-209ENST00000528230 COMPP49747 757 aaPredicted RBP9.99□□□□□ -0.81
TRAPPC4-209ENST00000528230 BAMBIQ13145 260 aa9.99□□□□□ -0.81
TRAPPC4-209ENST00000528230 CNN3Q15417 329 aaKnown RBP9.99□□□□□ -0.81
TRAPPC4-209ENST00000528230 TTC23Q5W5X9 447 aa9.99□□□□□ -0.81
TRAPPC4-209ENST00000528230 METAP1DQ6UB28 335 aaPredicted RBP9.99□□□□□ -0.81
TRAPPC4-209ENST00000528230 UTS2BQ765I0 119 aa9.99□□□□□ -0.81
TRAPPC4-209ENST00000528230 LHFPL3Q86UP9 236 aa9.99□□□□□ -0.81
TRAPPC4-209ENST00000528230 CALHM1Q8IU99 346 aa9.99□□□□□ -0.81
TRAPPC4-209ENST00000528230 RDH10Q8IZV5 341 aa9.99□□□□□ -0.81
TRAPPC4-209ENST00000528230 FGFRL1Q8N441 504 aa9.99□□□□□ -0.81
TRAPPC4-209ENST00000528230 DNAAF1Q8NEP3 725 aa9.99□□□□□ -0.81
TRAPPC4-209ENST00000528230 APH1BQ8WW43 257 aa9.99□□□□□ -0.81
TRAPPC4-209ENST00000528230 C4orf36Q96KX1 117 aa9.99□□□□□ -0.81
TRAPPC4-209ENST00000528230 NRIP2Q9BQI9 281 aa9.99□□□□□ -0.81
TRAPPC4-209ENST00000528230 ZNF649Q9BS31 505 aa9.99□□□□□ -0.81
TRAPPC4-209ENST00000528230 ALG8Q9BVK2 526 aa9.99□□□□□ -0.81
TRAPPC4-209ENST00000528230 HES4Q9HCC6 221 aa9.99□□□□□ -0.81
TRAPPC4-209ENST00000528230 AMBNQ9NP70 447 aa9.99□□□□□ -0.81
TRAPPC4-209ENST00000528230 NOX4Q9NPH5 578 aa9.99□□□□□ -0.81
TRAPPC4-209ENST00000528230 ERVK13-1Q9NX77 482 aa9.99□□□□□ -0.81
TRAPPC4-209ENST00000528230 HHLA2Q9UM44 414 aa9.99□□□□□ -0.81
TRAPPC4-209ENST00000528230 MYRFQ9Y2G1 1151 aa9.99□□□□□ -0.81
TRAPPC4-209ENST00000528230 MAB21L2Q9Y586 359 aa9.99□□□□□ -0.81
TRAPPC4-209ENST00000528230 IGHV1-69DA0A0B4J2H0 117 aa9.98□□□□□ -0.81
TRAPPC4-209ENST00000528230 FAM230AA0A1W2PPH8 454 aa9.98□□□□□ -0.81
TRAPPC4-209ENST00000528230 RFPL4AA6NLU0 287 aa9.98□□□□□ -0.81
TRAPPC4-209ENST00000528230 OR4C45A6NMZ5 311 aa9.98□□□□□ -0.81
TRAPPC4-209ENST00000528230 RFPL4AL1F8VTS6 287 aa9.98□□□□□ -0.81
TRAPPC4-209ENST00000528230 WBP4O75554 376 aaKnown RBP9.98□□□□□ -0.81
TRAPPC4-209ENST00000528230 NXPH2O95156 264 aa9.98□□□□□ -0.81
TRAPPC4-209ENST00000528230 IGHV1-69P01742 117 aa9.98□□□□□ -0.81
TRAPPC4-209ENST00000528230 SELLP14151 372 aa9.98□□□□□ -0.81
TRAPPC4-209ENST00000528230 NDUFB7P17568 137 aa9.98□□□□□ -0.81
TRAPPC4-209ENST00000528230 PRDX2P32119 198 aa9.98□□□□□ -0.81
TRAPPC4-209ENST00000528230 NANOS3P60323 173 aaKnown RBP9.98□□□□□ -0.81
TRAPPC4-209ENST00000528230 ERVK11-1P61568 191 aa9.98□□□□□ -0.81
TRAPPC4-209ENST00000528230 ACTG1P63261 375 aa9.98□□□□□ -0.81
TRAPPC4-209ENST00000528230 ALKBH1Q13686 389 aaKnown RBP9.98□□□□□ -0.81
TRAPPC4-209ENST00000528230 C12orf54Q6X4T0 127 aa9.98□□□□□ -0.81
TRAPPC4-209ENST00000528230 BRD3OSQ6XYD6 125 aa9.98□□□□□ -0.81
TRAPPC4-209ENST00000528230 ANGPTL5Q86XS5 388 aa9.98□□□□□ -0.81
TRAPPC4-209ENST00000528230 ZNF561Q8N587 486 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms