RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 TMEM42Q69YG0 159 aa8.61□□□□□ -1.03
CPSF1-203ENST00000527916 C11orf87Q6NUJ2 197 aa8.61□□□□□ -1.03
CPSF1-203ENST00000527916 DUX4L9Q6RFH8 374 aaPredicted RBP8.61□□□□□ -1.03
CPSF1-203ENST00000527916 ZNF322Q6U7Q0 402 aaPredicted RBP8.61□□□□□ -1.03
CPSF1-203ENST00000527916 THAP5Q7Z6K1 395 aa8.61□□□□□ -1.03
CPSF1-203ENST00000527916 AMIGO2Q86SJ2 522 aa8.61□□□□□ -1.03
CPSF1-203ENST00000527916 SLC35F2Q8IXU6 374 aa8.61□□□□□ -1.03
CPSF1-203ENST00000527916 ELMOD2Q8IZ81 293 aa8.61□□□□□ -1.03
CPSF1-203ENST00000527916 CMTM4Q8IZR5 234 aa8.61□□□□□ -1.03
CPSF1-203ENST00000527916 FAM216BQ8N7L0 139 aa8.61□□□□□ -1.03
CPSF1-203ENST00000527916 OR5T2Q8NGG2 359 aa8.61□□□□□ -1.03
CPSF1-203ENST00000527916 OR5R1Q8NH85 324 aa8.61□□□□□ -1.03
CPSF1-203ENST00000527916 OR51E1Q8TCB6 317 aa8.61□□□□□ -1.03
CPSF1-203ENST00000527916 PHF21AQ96BD5 680 aa8.61□□□□□ -1.03
CPSF1-203ENST00000527916 SEH1LQ96EE3 360 aa8.61□□□□□ -1.03
CPSF1-203ENST00000527916 CENPNQ96H22 339 aaPredicted RBP8.61□□□□□ -1.03
CPSF1-203ENST00000527916 ADGRL4Q9HBW9 690 aa8.61□□□□□ -1.03
CPSF1-203ENST00000527916 GPR84Q9NQS5 396 aa8.61□□□□□ -1.03
CPSF1-203ENST00000527916 NLKQ9UBE8 527 aa8.61□□□□□ -1.03
CPSF1-203ENST00000527916 DUX4Q9UBX2 424 aa8.61□□□□□ -1.03
CPSF1-203ENST00000527916 WARS2Q9UGM6 360 aaKnown RBP8.61□□□□□ -1.03
CPSF1-203ENST00000527916 ENPP5Q9UJA9 477 aa8.61□□□□□ -1.03
CPSF1-203ENST00000527916 IKZF2Q9UKS7 526 aa8.61□□□□□ -1.03
CPSF1-203ENST00000527916 R4GMQ9 66 aa8.61□□□□□ -1.03
CPSF1-203ENST00000527916 NKX6-3A6NJ46 265 aa8.6□□□□□ -1.03
CPSF1-203ENST00000527916 OR2AT4A6NND4 320 aa8.6□□□□□ -1.03
CPSF1-203ENST00000527916 ZNF670-ZNF695F2Z2N8 137 aa8.6□□□□□ -1.03
CPSF1-203ENST00000527916 LOC110117498-PIK3R3F6TDL0 507 aa8.6□□□□□ -1.03
CPSF1-203ENST00000527916 DLGAP1O14490 977 aa8.6□□□□□ -1.03
CPSF1-203ENST00000527916 NOS1APO75052 506 aaPredicted RBP8.6□□□□□ -1.03
CPSF1-203ENST00000527916 RHBDL1O75783 438 aa8.6□□□□□ -1.03
CPSF1-203ENST00000527916 PAHP00439 452 aa8.6□□□□□ -1.03
CPSF1-203ENST00000527916 NRASP01111 189 aa8.6□□□□□ -1.03
CPSF1-203ENST00000527916 OR2T7P0C7T2 308 aa8.6□□□□□ -1.03
CPSF1-203ENST00000527916 GLRA1P23415 457 aa8.6□□□□□ -1.03
CPSF1-203ENST00000527916 EEF1B2P24534 225 aaKnown RBP8.6□□□□□ -1.03
CPSF1-203ENST00000527916 ELF3P78545 371 aaPredicted RBP8.6□□□□□ -1.03
CPSF1-203ENST00000527916 GUCA2AQ02747 115 aa8.6□□□□□ -1.03
CPSF1-203ENST00000527916 IKZF1Q13422 519 aa8.6□□□□□ -1.03
CPSF1-203ENST00000527916 TMED1Q13445 227 aa8.6□□□□□ -1.03
CPSF1-203ENST00000527916 CEP78Q5JTW2 689 aa8.6□□□□□ -1.03
CPSF1-203ENST00000527916 CLVS2Q5SYC1 327 aa8.6□□□□□ -1.03
CPSF1-203ENST00000527916 ZNF684Q5T5D7 378 aa8.6□□□□□ -1.03
CPSF1-203ENST00000527916 MOB3CQ70IA8 216 aa8.6□□□□□ -1.03
CPSF1-203ENST00000527916 VMO1Q7Z5L0 202 aa8.6□□□□□ -1.03
CPSF1-203ENST00000527916 BCDIN3DQ7Z5W3 292 aaKnown RBP8.6□□□□□ -1.03
CPSF1-203ENST00000527916 PDZD9Q8IXQ8 264 aa8.6□□□□□ -1.03
CPSF1-203ENST00000527916 FGFRL1Q8N441 504 aa8.6□□□□□ -1.03
CPSF1-203ENST00000527916 PIP4P2Q8N4L2 257 aa8.6□□□□□ -1.03
CPSF1-203ENST00000527916 C11orf44Q8N8P7 122 aa8.6□□□□□ -1.03
CPSF1-203ENST00000527916 DTX3Q8N9I9 347 aa8.6□□□□□ -1.03
CPSF1-203ENST00000527916 OR2T27Q8NH04 317 aa8.6□□□□□ -1.03
CPSF1-203ENST00000527916 AQP3Q92482 292 aa8.6□□□□□ -1.03
CPSF1-203ENST00000527916 CFHR4Q92496 578 aa8.6□□□□□ -1.03
CPSF1-203ENST00000527916 GAFA1Q96PS6 74 aa8.6□□□□□ -1.03
CPSF1-203ENST00000527916 CIB1Q99828 191 aa8.6□□□□□ -1.03
CPSF1-203ENST00000527916 APOL4Q9BPW4 351 aa8.6□□□□□ -1.03
CPSF1-203ENST00000527916 PPA2Q9H2U2 334 aa8.6□□□□□ -1.03
CPSF1-203ENST00000527916 ZNRD1Q9P1U0 126 aa8.6□□□□□ -1.03
CPSF1-203ENST00000527916 SLC25A10Q9UBX3 287 aaPredicted RBP8.6□□□□□ -1.03
CPSF1-203ENST00000527916 OR52A1Q9UKL2 312 aa8.6□□□□□ -1.03
CPSF1-203ENST00000527916 PIGLQ9Y2B2 252 aa8.6□□□□□ -1.03
CPSF1-203ENST00000527916 SNX5Q9Y5X3 404 aa8.6□□□□□ -1.03
CPSF1-203ENST00000527916 V9GYS6 101 aa8.6□□□□□ -1.03
CPSF1-203ENST00000527916 IGKV1D-17A0A075B6S4 117 aa8.59□□□□□ -1.03
CPSF1-203ENST00000527916 A0A1B0GTI1 187 aa8.59□□□□□ -1.03
CPSF1-203ENST00000527916 M0R1W7 72 aa8.59□□□□□ -1.03
CPSF1-203ENST00000527916 SULT1C4O75897 302 aa8.59□□□□□ -1.03
CPSF1-203ENST00000527916 PSG2P11465 335 aa8.59□□□□□ -1.03
CPSF1-203ENST00000527916 FAHP16930 419 aa8.59□□□□□ -1.03
CPSF1-203ENST00000527916 CCL1P22362 96 aa8.59□□□□□ -1.03
CPSF1-203ENST00000527916 HTR1FP30939 366 aa8.59□□□□□ -1.03
CPSF1-203ENST00000527916 MFGE8Q08431 387 aaPredicted RBP8.59□□□□□ -1.03
CPSF1-203ENST00000527916 DGUOKQ16854 277 aa8.59□□□□□ -1.03
CPSF1-203ENST00000527916 COMMD2Q86X83 199 aa8.59□□□□□ -1.03
CPSF1-203ENST00000527916 ZNF573Q86YE8 665 aa8.59□□□□□ -1.03
CPSF1-203ENST00000527916 KLHDC1Q8N7A1 406 aa8.59□□□□□ -1.03
CPSF1-203ENST00000527916 Q8N7P7 452 aa8.59□□□□□ -1.03
CPSF1-203ENST00000527916 POC1AQ8NBT0 407 aa8.59□□□□□ -1.03
CPSF1-203ENST00000527916 CCDC54Q8NEL0 328 aa8.59□□□□□ -1.03
CPSF1-203ENST00000527916 OR4F17Q8NGA8 305 aa8.59□□□□□ -1.03
CPSF1-203ENST00000527916 OR4C13Q8NGP0 309 aa8.59□□□□□ -1.03
CPSF1-203ENST00000527916 OR8J1Q8NGP2 316 aa8.59□□□□□ -1.03
CPSF1-203ENST00000527916 OR14K1Q8NGZ2 314 aa8.59□□□□□ -1.03
CPSF1-203ENST00000527916 OR2T6Q8NHC8 308 aa8.59□□□□□ -1.03
CPSF1-203ENST00000527916 TRUB1Q8WWH5 349 aaKnown RBP8.59□□□□□ -1.03
CPSF1-203ENST00000527916 SDSLQ96GA7 329 aa8.59□□□□□ -1.03
CPSF1-203ENST00000527916 OR4F4Q96R69 305 aa8.59□□□□□ -1.03
CPSF1-203ENST00000527916 IL4I1Q96RQ9 567 aa8.59□□□□□ -1.03
CPSF1-203ENST00000527916 OCSTAMPQ9BR26 566 aa8.59□□□□□ -1.03
CPSF1-203ENST00000527916 GABARAPL3Q9BY60 117 aa8.59□□□□□ -1.03
CPSF1-203ENST00000527916 SNTG1Q9NSN8 517 aa8.59□□□□□ -1.03
CPSF1-203ENST00000527916 MRM2Q9UI43 246 aaKnown RBP8.59□□□□□ -1.03
CPSF1-203ENST00000527916 ZNF222Q9UK12 451 aa8.59□□□□□ -1.03
CPSF1-203ENST00000527916 MAB21L2Q9Y586 359 aa8.59□□□□□ -1.03
CPSF1-203ENST00000527916 TRBV23-1A0A0A0MS06 115 aa8.58□□□□□ -1.04
CPSF1-203ENST00000527916 PQLC2LA1A4F0 135 aa8.58□□□□□ -1.04
CPSF1-203ENST00000527916 METTL15A6NJ78 407 aa8.58□□□□□ -1.04
CPSF1-203ENST00000527916 J3QT63 122 aa8.58□□□□□ -1.04
CPSF1-203ENST00000527916 M0R129 80 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms