RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 TET2Q6N021 2002 aaPredicted RBP18.24■□□□□ 0.51
TRAPPC4-208ENST00000527680 hCG_1809904A0A1W2PP81 198 aa18.24■□□□□ 0.51
TRAPPC4-208ENST00000527680 A0A1W2PPE2 198 aa18.24■□□□□ 0.51
TRAPPC4-208ENST00000527680 A0A1W2PR64 198 aa18.24■□□□□ 0.51
TRAPPC4-208ENST00000527680 A0A1W2PRV1 198 aa18.24■□□□□ 0.51
TRAPPC4-208ENST00000527680 GYG2O15488 501 aa18.24■□□□□ 0.51
TRAPPC4-208ENST00000527680 FKBP6O75344 327 aa18.24■□□□□ 0.51
TRAPPC4-208ENST00000527680 PRDX2P32119 198 aa18.24■□□□□ 0.51
TRAPPC4-208ENST00000527680 HAAOP46952 286 aa18.24■□□□□ 0.51
TRAPPC4-208ENST00000527680 ACTR3P61158 418 aa18.24■□□□□ 0.51
TRAPPC4-208ENST00000527680 ROM1Q03395 351 aa18.24■□□□□ 0.51
TRAPPC4-208ENST00000527680 ZBTB37Q5TC79 503 aa18.24■□□□□ 0.51
TRAPPC4-208ENST00000527680 HCP5Q6MZN7 132 aa18.24■□□□□ 0.51
TRAPPC4-208ENST00000527680 ZNF573Q86YE8 665 aa18.24■□□□□ 0.51
TRAPPC4-208ENST00000527680 CD177Q8N6Q3 437 aa18.24■□□□□ 0.51
TRAPPC4-208ENST00000527680 OR4M1Q8NGD0 313 aa18.24■□□□□ 0.51
TRAPPC4-208ENST00000527680 OR2T27Q8NH04 317 aa18.24■□□□□ 0.51
TRAPPC4-208ENST00000527680 NUFIP1Q9UHK0 495 aaKnown RBP18.24■□□□□ 0.51
TRAPPC4-208ENST00000527680 COPS3Q9UNS2 423 aa18.24■□□□□ 0.51
TRAPPC4-208ENST00000527680 SIGLEC9Q9Y336 463 aa18.24■□□□□ 0.51
TRAPPC4-208ENST00000527680 DHRS3O75911 302 aa18.23■□□□□ 0.51
TRAPPC4-208ENST00000527680 NXPH2O95156 264 aa18.23■□□□□ 0.51
TRAPPC4-208ENST00000527680 PAX6P26367 422 aa18.23■□□□□ 0.51
TRAPPC4-208ENST00000527680 LRRC75BQ2VPJ9 315 aa18.23■□□□□ 0.51
TRAPPC4-208ENST00000527680 CLVS2Q5SYC1 327 aa18.23■□□□□ 0.51
TRAPPC4-208ENST00000527680 TMEM200BQ69YZ2 307 aa18.23■□□□□ 0.51
TRAPPC4-208ENST00000527680 ASRGL1Q7L266 308 aa18.23■□□□□ 0.51
TRAPPC4-208ENST00000527680 ZNF561Q8N587 486 aa18.23■□□□□ 0.51
TRAPPC4-208ENST00000527680 POC1AQ8NBT0 407 aa18.23■□□□□ 0.51
TRAPPC4-208ENST00000527680 OR4C13Q8NGP0 309 aa18.23■□□□□ 0.51
TRAPPC4-208ENST00000527680 PPP1R35Q8TAP8 253 aa18.23■□□□□ 0.51
TRAPPC4-208ENST00000527680 CNN2Q99439 309 aaKnown RBP18.23■□□□□ 0.51
TRAPPC4-208ENST00000527680 MEGF9Q9H1U4 602 aa18.23■□□□□ 0.51
TRAPPC4-208ENST00000527680 GPR173Q9NS66 373 aa18.23■□□□□ 0.51
TRAPPC4-208ENST00000527680 OR14J1Q9UGF5 321 aa18.23■□□□□ 0.51
TRAPPC4-208ENST00000527680 CCDC182A6NF36 153 aa18.22■□□□□ 0.51
TRAPPC4-208ENST00000527680 LOC110117498-PIK3R3F6TDL0 507 aa18.22■□□□□ 0.51
TRAPPC4-208ENST00000527680 SYNGR1O43759 233 aa18.22■□□□□ 0.51
TRAPPC4-208ENST00000527680 TTRP02766 147 aa18.22■□□□□ 0.51
TRAPPC4-208ENST00000527680 CEBPDP49716 269 aaPredicted RBP18.22■□□□□ 0.51
TRAPPC4-208ENST00000527680 CXCR4P61073 352 aa18.22■□□□□ 0.51
TRAPPC4-208ENST00000527680 MFGE8Q08431 387 aaPredicted RBP18.22■□□□□ 0.51
TRAPPC4-208ENST00000527680 HERPUD1Q15011 391 aa18.22■□□□□ 0.51
TRAPPC4-208ENST00000527680 PTGES3Q15185 160 aaKnown RBP18.22■□□□□ 0.51
TRAPPC4-208ENST00000527680 ZNF322Q6U7Q0 402 aaPredicted RBP18.22■□□□□ 0.51
TRAPPC4-208ENST00000527680 BATF2Q8N1L9 274 aa18.22■□□□□ 0.51
TRAPPC4-208ENST00000527680 DNAJC9Q8WXX5 260 aa18.22■□□□□ 0.51
TRAPPC4-208ENST00000527680 APOL4Q9BPW4 351 aa18.22■□□□□ 0.51
TRAPPC4-208ENST00000527680 PRRG3Q9BZD7 231 aa18.22■□□□□ 0.51
TRAPPC4-208ENST00000527680 RAB18Q9NP72 206 aa18.22■□□□□ 0.51
TRAPPC4-208ENST00000527680 POLDIP2Q9Y2S7 368 aa18.22■□□□□ 0.51
TRAPPC4-208ENST00000527680 A6NIN4 97 aa18.21■□□□□ 0.51
TRAPPC4-208ENST00000527680 PRR32B1ATL7 298 aa18.21■□□□□ 0.51
TRAPPC4-208ENST00000527680 MAGEB4O15481 346 aaPredicted RBP18.21■□□□□ 0.51
TRAPPC4-208ENST00000527680 PRKYO43930 277 aa18.21■□□□□ 0.51
TRAPPC4-208ENST00000527680 IGLV3-1P01715 115 aa18.21■□□□□ 0.51
TRAPPC4-208ENST00000527680 COX7A1P24310 79 aa18.21■□□□□ 0.51
TRAPPC4-208ENST00000527680 KIR2DS4P43632 304 aa18.21■□□□□ 0.51
TRAPPC4-208ENST00000527680 BCL2L15Q5TBC7 163 aa18.21■□□□□ 0.51
TRAPPC4-208ENST00000527680 MEPCEQ7L2J0 689 aaKnown RBP18.21■□□□□ 0.51
TRAPPC4-208ENST00000527680 C11orf44Q8N8P7 122 aa18.21■□□□□ 0.51
TRAPPC4-208ENST00000527680 OR5K1Q8NHB7 308 aa18.21■□□□□ 0.51
TRAPPC4-208ENST00000527680 OR2T6Q8NHC8 308 aa18.21■□□□□ 0.51
TRAPPC4-208ENST00000527680 NRBF2Q96F24 287 aa18.21■□□□□ 0.51
TRAPPC4-208ENST00000527680 USE1Q9NZ43 259 aa18.21■□□□□ 0.51
TRAPPC4-208ENST00000527680 A0A0G2JK05 382 aa18.2■□□□□ 0.5
TRAPPC4-208ENST00000527680 J3QT63 122 aa18.2■□□□□ 0.5
TRAPPC4-208ENST00000527680 PGA5P0DJD9 388 aa18.2■□□□□ 0.5
TRAPPC4-208ENST00000527680 ERVFRD-1P60508 538 aa18.2■□□□□ 0.5
TRAPPC4-208ENST00000527680 DNAL1Q4LDG9 190 aa18.2■□□□□ 0.5
TRAPPC4-208ENST00000527680 BCDIN3DQ7Z5W3 292 aaKnown RBP18.2■□□□□ 0.5
TRAPPC4-208ENST00000527680 SLC35F2Q8IXU6 374 aa18.2■□□□□ 0.5
TRAPPC4-208ENST00000527680 NKX3-1Q99801 234 aaPredicted RBP18.2■□□□□ 0.5
TRAPPC4-208ENST00000527680 OR52A1Q9UKL2 312 aa18.2■□□□□ 0.5
TRAPPC4-208ENST00000527680 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.2■□□□□ 0.5
TRAPPC4-208ENST00000527680 FOXJ3Q9UPW0 622 aa18.2■□□□□ 0.5
TRAPPC4-208ENST00000527680 ZNF670-ZNF695F2Z2N8 137 aa18.19■□□□□ 0.5
TRAPPC4-208ENST00000527680 DLGAP1O14490 977 aa18.19■□□□□ 0.5
TRAPPC4-208ENST00000527680 PIPP12273 146 aaPredicted RBP18.19■□□□□ 0.5
TRAPPC4-208ENST00000527680 CCL3L1P16619 93 aa18.19■□□□□ 0.5
TRAPPC4-208ENST00000527680 DAPP51397 102 aa18.19■□□□□ 0.5
TRAPPC4-208ENST00000527680 C11orf88Q6PI97 169 aa18.19■□□□□ 0.5
TRAPPC4-208ENST00000527680 PLEKHG7Q6ZR37 379 aa18.19■□□□□ 0.5
TRAPPC4-208ENST00000527680 ELMOD2Q8IZ81 293 aa18.19■□□□□ 0.5
TRAPPC4-208ENST00000527680 TCEANCQ8N8B7 351 aa18.19■□□□□ 0.5
TRAPPC4-208ENST00000527680 DTX3Q8N9I9 347 aa18.19■□□□□ 0.5
TRAPPC4-208ENST00000527680 AJUBAQ96IF1 538 aa18.19■□□□□ 0.5
TRAPPC4-208ENST00000527680 MOB1AQ9H8S9 216 aa18.19■□□□□ 0.5
TRAPPC4-208ENST00000527680 R4GMQ9 66 aa18.19■□□□□ 0.5
TRAPPC4-208ENST00000527680 TCRBV3S1A0A5B6 114 aa18.18■□□□□ 0.5
TRAPPC4-208ENST00000527680 NOS1APO75052 506 aaPredicted RBP18.18■□□□□ 0.5
TRAPPC4-208ENST00000527680 VSIG10L2P0DP72 767 aa18.18■□□□□ 0.5
TRAPPC4-208ENST00000527680 BMXP51813 675 aa18.18■□□□□ 0.5
TRAPPC4-208ENST00000527680 EFNB2P52799 333 aa18.18■□□□□ 0.5
TRAPPC4-208ENST00000527680 AANATQ16613 207 aa18.18■□□□□ 0.5
TRAPPC4-208ENST00000527680 ZNF782Q6ZMW2 699 aaPredicted RBP18.18■□□□□ 0.5
TRAPPC4-208ENST00000527680 ANGPTL5Q86XS5 388 aa18.18■□□□□ 0.5
TRAPPC4-208ENST00000527680 MNTQ99583 582 aa18.18■□□□□ 0.5
TRAPPC4-208ENST00000527680 NPFFR1Q9GZQ6 430 aa18.18■□□□□ 0.5
TRAPPC4-208ENST00000527680 POMPQ9Y244 141 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms