RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 TNFAIP8L2Q6P589 184 aaPredicted RBP3.23□□□□□ -1.89
CLNS1A-209ENST00000527299 ZNF549Q6P9A3 640 aa3.23□□□□□ -1.89
CLNS1A-209ENST00000527299 CTU1Q7Z7A3 348 aaKnown RBP3.23□□□□□ -1.89
CLNS1A-209ENST00000527299 MARCH9Q86YJ5 346 aa3.23□□□□□ -1.89
CLNS1A-209ENST00000527299 APOBEC3FQ8IUX4 373 aaKnown RBP3.23□□□□□ -1.89
CLNS1A-209ENST00000527299 LAS2Q8IYD9 372 aa3.23□□□□□ -1.89
CLNS1A-209ENST00000527299 LGI3Q8N145 548 aa3.23□□□□□ -1.89
CLNS1A-209ENST00000527299 BEST3Q8N1M1 668 aa3.23□□□□□ -1.89
CLNS1A-209ENST00000527299 PNKDQ8N490 385 aa3.23□□□□□ -1.89
CLNS1A-209ENST00000527299 PAQR4Q8N4S7 273 aaPredicted RBP3.23□□□□□ -1.89
CLNS1A-209ENST00000527299 ARIH2OSQ8N7S6 290 aa3.23□□□□□ -1.89
CLNS1A-209ENST00000527299 COX18Q8N8Q8 333 aa3.23□□□□□ -1.89
CLNS1A-209ENST00000527299 ARL14EPQ8N8R7 260 aaPredicted RBP3.23□□□□□ -1.89
CLNS1A-209ENST00000527299 AMER3Q8N944 861 aa3.23□□□□□ -1.89
CLNS1A-209ENST00000527299 GATSQ8NAP1 163 aa3.23□□□□□ -1.89
CLNS1A-209ENST00000527299 CHST4Q8NCG5 386 aa3.23□□□□□ -1.89
CLNS1A-209ENST00000527299 C1orf162Q8NEQ5 155 aaPredicted RBP3.23□□□□□ -1.89
CLNS1A-209ENST00000527299 OR9K2Q8NGE7 335 aa3.23□□□□□ -1.89
CLNS1A-209ENST00000527299 OR4B1Q8NGF8 309 aa3.23□□□□□ -1.89
CLNS1A-209ENST00000527299 OR52E1Q8NGJ3 308 aa3.23□□□□□ -1.89
CLNS1A-209ENST00000527299 OR10X1Q8NGY0 326 aa3.23□□□□□ -1.89
CLNS1A-209ENST00000527299 SUN3Q8TAQ9 357 aa3.23□□□□□ -1.89
CLNS1A-209ENST00000527299 SLC2A12Q8TD20 617 aa3.23□□□□□ -1.89
CLNS1A-209ENST00000527299 SECTM1Q8WVN6 248 aa3.23□□□□□ -1.89
CLNS1A-209ENST00000527299 TMEM45BQ96B21 275 aa3.23□□□□□ -1.89
CLNS1A-209ENST00000527299 ATOH8Q96SQ7 321 aa3.23□□□□□ -1.89
CLNS1A-209ENST00000527299 GINS3Q9BRX5 216 aa3.23□□□□□ -1.89
CLNS1A-209ENST00000527299 CHRDL1Q9BU40 450 aa3.23□□□□□ -1.89
CLNS1A-209ENST00000527299 SCRT1Q9BWW7 348 aa3.23□□□□□ -1.89
CLNS1A-209ENST00000527299 SLC39A8Q9C0K1 460 aa3.23□□□□□ -1.89
CLNS1A-209ENST00000527299 FAM234AQ9H0X4 552 aa3.23□□□□□ -1.89
CLNS1A-209ENST00000527299 MAGEH1Q9H213 219 aa3.23□□□□□ -1.89
CLNS1A-209ENST00000527299 C1orf198Q9H425 327 aa3.23□□□□□ -1.89
CLNS1A-209ENST00000527299 RHOJQ9H4E5 214 aa3.23□□□□□ -1.89
CLNS1A-209ENST00000527299 BEX1Q9HBH7 125 aa3.23□□□□□ -1.89
CLNS1A-209ENST00000527299 SGK2Q9HBY8 427 aa3.23□□□□□ -1.89
CLNS1A-209ENST00000527299 FGF20Q9NP95 211 aaPredicted RBP3.23□□□□□ -1.89
CLNS1A-209ENST00000527299 OR2S2Q9NQN1 319 aa3.23□□□□□ -1.89
CLNS1A-209ENST00000527299 MRPL17Q9NRX2 175 aaKnown RBP3.23□□□□□ -1.89
CLNS1A-209ENST00000527299 TMEM242Q9NWH2 141 aa3.23□□□□□ -1.89
CLNS1A-209ENST00000527299 TAS2R8Q9NYW2 309 aa3.23□□□□□ -1.89
CLNS1A-209ENST00000527299 MTCH1Q9NZJ7 389 aa3.23□□□□□ -1.89
CLNS1A-209ENST00000527299 COMMD9Q9P000 198 aa3.23□□□□□ -1.89
CLNS1A-209ENST00000527299 UQCR10Q9UDW1 63 aa3.23□□□□□ -1.89
CLNS1A-209ENST00000527299 SLC23A2Q9UGH3 650 aa3.23□□□□□ -1.89
CLNS1A-209ENST00000527299 SHPKQ9UHJ6 478 aa3.23□□□□□ -1.89
CLNS1A-209ENST00000527299 PILRBQ9UKJ0 227 aa3.23□□□□□ -1.89
CLNS1A-209ENST00000527299 RCE1Q9Y256 329 aa3.23□□□□□ -1.89
CLNS1A-209ENST00000527299 FARSAQ9Y285 508 aaKnown RBP3.23□□□□□ -1.89
CLNS1A-209ENST00000527299 NTNG1Q9Y2I2 539 aa3.23□□□□□ -1.89
CLNS1A-209ENST00000527299 LAMTOR2Q9Y2Q5 125 aa3.23□□□□□ -1.89
CLNS1A-209ENST00000527299 YARS2Q9Y2Z4 477 aaKnown RBP3.23□□□□□ -1.89
CLNS1A-209ENST00000527299 MRPS16Q9Y3D3 137 aaKnown RBP3.23□□□□□ -1.89
CLNS1A-209ENST00000527299 RNF115Q9Y4L5 304 aa3.23□□□□□ -1.89
CLNS1A-209ENST00000527299 NEUROG3Q9Y4Z2 214 aa3.23□□□□□ -1.89
CLNS1A-209ENST00000527299 ADAMTS7Q9UKP4 1686 aa3.23□□□□□ -1.89
CLNS1A-209ENST00000527299 TDRD15B5MCY1 1934 aaKnown RBP3.23□□□□□ -1.89
CLNS1A-209ENST00000527299 PHLPP1O60346 1717 aa3.22□□□□□ -1.89
CLNS1A-209ENST00000527299 NRXN2Q9P2S2 1712 aa3.22□□□□□ -1.89
CLNS1A-209ENST00000527299 MCM3APO60318 1980 aa3.22□□□□□ -1.89
CLNS1A-209ENST00000527299 SBF2Q86WG5 1849 aa3.22□□□□□ -1.89
CLNS1A-209ENST00000527299 TRBV5-3A0A0A0MS03 114 aa3.22□□□□□ -1.89
CLNS1A-209ENST00000527299 TRBV6-7A0A0A0MS04 114 aa3.22□□□□□ -1.89
CLNS1A-209ENST00000527299 TRBV2A0A0J9YWF9 115 aa3.22□□□□□ -1.89
CLNS1A-209ENST00000527299 ARRDC5A6NEK1 342 aa3.22□□□□□ -1.89
CLNS1A-209ENST00000527299 OR6C6A6NF89 314 aa3.22□□□□□ -1.89
CLNS1A-209ENST00000527299 NPIPB15A6NHN6 443 aaPredicted RBP3.22□□□□□ -1.89
CLNS1A-209ENST00000527299 IFITM5A6NNB3 132 aa3.22□□□□□ -1.89
CLNS1A-209ENST00000527299 A8MT66 165 aa3.22□□□□□ -1.89
CLNS1A-209ENST00000527299 HEPACAM2A8MVW5 462 aa3.22□□□□□ -1.89
CLNS1A-209ENST00000527299 UMAD1C9J7I0 102 aa3.22□□□□□ -1.89
CLNS1A-209ENST00000527299 E5RGE8 158 aa3.22□□□□□ -1.89
CLNS1A-209ENST00000527299 H7BYZ3 331 aa3.22□□□□□ -1.89
CLNS1A-209ENST00000527299 K7EPK0 472 aa3.22□□□□□ -1.89
CLNS1A-209ENST00000527299 K7EQM0 130 aa3.22□□□□□ -1.89
CLNS1A-209ENST00000527299 K7ESF4 209 aa3.22□□□□□ -1.89
CLNS1A-209ENST00000527299 DCTN6O00399 190 aa3.22□□□□□ -1.89
CLNS1A-209ENST00000527299 SLC17A3O00476 420 aa3.22□□□□□ -1.89
CLNS1A-209ENST00000527299 AGPAT2O15120 278 aa3.22□□□□□ -1.89
CLNS1A-209ENST00000527299 SIVA1O15304 175 aa3.22□□□□□ -1.89
CLNS1A-209ENST00000527299 SNAI2O43623 268 aa3.22□□□□□ -1.89
CLNS1A-209ENST00000527299 PDE6DO43924 150 aa3.22□□□□□ -1.89
CLNS1A-209ENST00000527299 PCDH7O60245 1069 aa3.22□□□□□ -1.89
CLNS1A-209ENST00000527299 YPEL1O60688 119 aa3.22□□□□□ -1.89
CLNS1A-209ENST00000527299 NME6O75414 186 aaPredicted RBP3.22□□□□□ -1.89
CLNS1A-209ENST00000527299 SCGB2A1O75556 95 aa3.22□□□□□ -1.89
CLNS1A-209ENST00000527299 LSM8O95777 96 aaKnown RBP3.22□□□□□ -1.89
CLNS1A-209ENST00000527299 CD160O95971 181 aa3.22□□□□□ -1.89
CLNS1A-209ENST00000527299 MMP7P09237 267 aaPredicted RBP3.22□□□□□ -1.89
CLNS1A-209ENST00000527299 OR4Q2P0C623 313 aa3.22□□□□□ -1.89
CLNS1A-209ENST00000527299 HGFP14210 728 aa3.22□□□□□ -1.89
CLNS1A-209ENST00000527299 ARSAP15289 507 aa3.22□□□□□ -1.89
CLNS1A-209ENST00000527299 OMGP23515 440 aa3.22□□□□□ -1.89
CLNS1A-209ENST00000527299 DUSP1P28562 367 aa3.22□□□□□ -1.89
CLNS1A-209ENST00000527299 CMPK1P30085 196 aa3.22□□□□□ -1.89
CLNS1A-209ENST00000527299 PPIFP30405 207 aaKnown RBP3.22□□□□□ -1.89
CLNS1A-209ENST00000527299 TM4SF1P30408 202 aa3.22□□□□□ -1.89
CLNS1A-209ENST00000527299 SRD5A2P31213 254 aa3.22□□□□□ -1.89
CLNS1A-209ENST00000527299 OR1D2P34982 312 aa3.22□□□□□ -1.89
CLNS1A-209ENST00000527299 MTNR1AP48039 350 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms