RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 PGA5P0DJD9 388 aa9.01□□□□□ -0.97
NEDD8-205ENST00000527046 RAB3AP20336 220 aa9.01□□□□□ -0.97
NEDD8-205ENST00000527046 PRKACBP22694 351 aa9.01□□□□□ -0.97
NEDD8-205ENST00000527046 GADD45AP24522 165 aa9.01□□□□□ -0.97
NEDD8-205ENST00000527046 FGF9P31371 208 aaPredicted RBP9.01□□□□□ -0.97
NEDD8-205ENST00000527046 GPR6P46095 362 aaPredicted RBP9.01□□□□□ -0.97
NEDD8-205ENST00000527046 NPBWR2P48146 333 aa9.01□□□□□ -0.97
NEDD8-205ENST00000527046 RBP2P50120 134 aa9.01□□□□□ -0.97
NEDD8-205ENST00000527046 MTCP1P56278 107 aa9.01□□□□□ -0.97
NEDD8-205ENST00000527046 LOXL1Q08397 574 aaPredicted RBP9.01□□□□□ -0.97
NEDD8-205ENST00000527046 IL24Q13007 206 aa9.01□□□□□ -0.97
NEDD8-205ENST00000527046 PDZK1IP1Q13113 114 aa9.01□□□□□ -0.97
NEDD8-205ENST00000527046 KISS1Q15726 138 aa9.01□□□□□ -0.97
NEDD8-205ENST00000527046 CARTPTQ16568 116 aa9.01□□□□□ -0.97
NEDD8-205ENST00000527046 SFRP4Q6FHJ7 346 aaPredicted RBP9.01□□□□□ -0.97
NEDD8-205ENST00000527046 CLEC2AQ6UVW9 174 aa9.01□□□□□ -0.97
NEDD8-205ENST00000527046 LYPD2Q6UXB3 125 aa9.01□□□□□ -0.97
NEDD8-205ENST00000527046 NR2C2APQ86WQ0 139 aa9.01□□□□□ -0.97
NEDD8-205ENST00000527046 ZNF573Q86YE8 665 aa9.01□□□□□ -0.97
NEDD8-205ENST00000527046 MAPK1IP1LQ8NDC0 245 aa9.01□□□□□ -0.97
NEDD8-205ENST00000527046 Q8NFD4 153 aa9.01□□□□□ -0.97
NEDD8-205ENST00000527046 CLDND2Q8NHS1 167 aa9.01□□□□□ -0.97
NEDD8-205ENST00000527046 RFT1Q96AA3 541 aa9.01□□□□□ -0.97
NEDD8-205ENST00000527046 SPSB1Q96BD6 273 aa9.01□□□□□ -0.97
NEDD8-205ENST00000527046 C1orf159Q96HA4 380 aa9.01□□□□□ -0.97
NEDD8-205ENST00000527046 TECTBQ96PL2 329 aa9.01□□□□□ -0.97
NEDD8-205ENST00000527046 NRIP2Q9BQI9 281 aa9.01□□□□□ -0.97
NEDD8-205ENST00000527046 TMEM246Q9BRR3 403 aa9.01□□□□□ -0.97
NEDD8-205ENST00000527046 PKIBQ9C010 78 aa9.01□□□□□ -0.97
NEDD8-205ENST00000527046 RNF167Q9H6Y7 350 aa9.01□□□□□ -0.97
NEDD8-205ENST00000527046 ARHGAP32A7KAX9 2087 aa9.01□□□□□ -0.97
NEDD8-205ENST00000527046 ITPR3Q14573 2671 aa9□□□□□ -0.97
NEDD8-205ENST00000527046 PPIAL4EA0A075B759 164 aa9□□□□□ -0.97
NEDD8-205ENST00000527046 IGHV3OR15-7A0A075B7D8 119 aa9□□□□□ -0.97
NEDD8-205ENST00000527046 A6NLC8 198 aa9□□□□□ -0.97
NEDD8-205ENST00000527046 PPIAL4DF5H284 164 aa9□□□□□ -0.97
NEDD8-205ENST00000527046 IFNL4K9M1U5 179 aa9□□□□□ -0.97
NEDD8-205ENST00000527046 LGALS8O00214 317 aa9□□□□□ -0.97
NEDD8-205ENST00000527046 PPIHO43447 177 aaKnown RBP9□□□□□ -0.97
NEDD8-205ENST00000527046 ANGPTL7O43827 346 aa9□□□□□ -0.97
NEDD8-205ENST00000527046 RGS9O75916 674 aaPredicted RBP9□□□□□ -0.97
NEDD8-205ENST00000527046 TFF1P04155 84 aa9□□□□□ -0.97
NEDD8-205ENST00000527046 CD2P06729 351 aa9□□□□□ -0.97
NEDD8-205ENST00000527046 SFTPBP07988 381 aa9□□□□□ -0.97
NEDD8-205ENST00000527046 WNT2P09544 360 aa9□□□□□ -0.97
NEDD8-205ENST00000527046 PPIAL4FP0DN26 164 aa9□□□□□ -0.97
NEDD8-205ENST00000527046 SLC25A16P16260 332 aa9□□□□□ -0.97
NEDD8-205ENST00000527046 GALP22466 123 aa9□□□□□ -0.97
NEDD8-205ENST00000527046 BDKRB2P30411 391 aa9□□□□□ -0.97
NEDD8-205ENST00000527046 CD80P33681 288 aa9□□□□□ -0.97
NEDD8-205ENST00000527046 ATP1B3P54709 279 aa9□□□□□ -0.97
NEDD8-205ENST00000527046 BTG1P62324 171 aa9□□□□□ -0.97
NEDD8-205ENST00000527046 MZT1Q08AG7 82 aa9□□□□□ -0.97
NEDD8-205ENST00000527046 CNN3Q15417 329 aaKnown RBP9□□□□□ -0.97
NEDD8-205ENST00000527046 TRAM1Q15629 374 aa9□□□□□ -0.97
NEDD8-205ENST00000527046 ZNF404Q494X3 552 aa9□□□□□ -0.97
NEDD8-205ENST00000527046 FAM166AQ6J272 317 aa9□□□□□ -0.97
NEDD8-205ENST00000527046 ZNF841Q6ZN19 808 aa9□□□□□ -0.97
NEDD8-205ENST00000527046 LHFPL2Q6ZUX7 228 aa9□□□□□ -0.97
NEDD8-205ENST00000527046 SLC25A26Q70HW3 274 aa9□□□□□ -0.97
NEDD8-205ENST00000527046 FAM90A1Q86YD7 464 aa9□□□□□ -0.97
NEDD8-205ENST00000527046 BATF2Q8N1L9 274 aa9□□□□□ -0.97
NEDD8-205ENST00000527046 POC1AQ8NBT0 407 aa9□□□□□ -0.97
NEDD8-205ENST00000527046 OR13F1Q8NGS4 319 aa9□□□□□ -0.97
NEDD8-205ENST00000527046 PHYHIPQ92561 330 aa9□□□□□ -0.97
NEDD8-205ENST00000527046 SLC25A28Q96A46 364 aa9□□□□□ -0.97
NEDD8-205ENST00000527046 BORCS8Q96FH0 119 aa9□□□□□ -0.97
NEDD8-205ENST00000527046 COX4I2Q96KJ9 171 aa9□□□□□ -0.97
NEDD8-205ENST00000527046 TMEM138Q9NPI0 162 aa9□□□□□ -0.97
NEDD8-205ENST00000527046 TXNL4BQ9NX01 149 aaKnown RBP9□□□□□ -0.97
NEDD8-205ENST00000527046 ZNF222Q9UK12 451 aa9□□□□□ -0.97
NEDD8-205ENST00000527046 SLC7A11Q9UPY5 501 aa9□□□□□ -0.97
NEDD8-205ENST00000527046 PPIAL4AQ9Y536 164 aa9□□□□□ -0.97
NEDD8-205ENST00000527046 IGKV1D-17A0A075B6S4 117 aa8.99□□□□□ -0.97
NEDD8-205ENST00000527046 A0A0G2JK05 382 aa8.99□□□□□ -0.97
NEDD8-205ENST00000527046 A0A1B0GW55 424 aa8.99□□□□□ -0.97
NEDD8-205ENST00000527046 FAM157AC9JC47 383 aa8.99□□□□□ -0.97
NEDD8-205ENST00000527046 CLDN25C9JDP6 229 aa8.99□□□□□ -0.97
NEDD8-205ENST00000527046 F5H0A9 414 aaPredicted RBP8.99□□□□□ -0.97
NEDD8-205ENST00000527046 H7C1Q1 480 aa8.99□□□□□ -0.97
NEDD8-205ENST00000527046 MAS1P04201 325 aa8.99□□□□□ -0.97
NEDD8-205ENST00000527046 DUX4L2P0CJ85 424 aa8.99□□□□□ -0.97
NEDD8-205ENST00000527046 DUX4L3P0CJ86 424 aa8.99□□□□□ -0.97
NEDD8-205ENST00000527046 DUX4L4P0CJ87 422 aa8.99□□□□□ -0.97
NEDD8-205ENST00000527046 DUX4L5P0CJ88 424 aa8.99□□□□□ -0.97
NEDD8-205ENST00000527046 DUX4L6P0CJ89 424 aa8.99□□□□□ -0.97
NEDD8-205ENST00000527046 DUX4L7P0CJ90 424 aa8.99□□□□□ -0.97
NEDD8-205ENST00000527046 CD36P16671 472 aa8.99□□□□□ -0.97
NEDD8-205ENST00000527046 USF1P22415 310 aaPredicted RBP8.99□□□□□ -0.97
NEDD8-205ENST00000527046 PSMA1P25786 263 aaKnown RBP8.99□□□□□ -0.97
NEDD8-205ENST00000527046 TGFBR1P36897 503 aa8.99□□□□□ -0.97
NEDD8-205ENST00000527046 SEC61A1P61619 476 aaKnown RBP8.99□□□□□ -0.97
NEDD8-205ENST00000527046 C1orf100Q5SVJ3 147 aa8.99□□□□□ -0.97
NEDD8-205ENST00000527046 ATPAF1Q5TC12 328 aaPredicted RBP8.99□□□□□ -0.97
NEDD8-205ENST00000527046 DUX4L9Q6RFH8 374 aaPredicted RBP8.99□□□□□ -0.97
NEDD8-205ENST00000527046 ACP7Q6ZNF0 438 aa8.99□□□□□ -0.97
NEDD8-205ENST00000527046 CDH26Q8IXH8 852 aa8.99□□□□□ -0.97
NEDD8-205ENST00000527046 FGFRL1Q8N441 504 aa8.99□□□□□ -0.97
NEDD8-205ENST00000527046 CD177Q8N6Q3 437 aa8.99□□□□□ -0.97
NEDD8-205ENST00000527046 BOLLQ8N9W6 283 aaKnown RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms