RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 LALBAP00709 142 aa14.78□□□□□ -0.04
CLK4-211ENST00000522556 ISG15P05161 165 aa14.78□□□□□ -0.04
CLK4-211ENST00000522556 SFTPBP07988 381 aa14.78□□□□□ -0.04
CLK4-211ENST00000522556 PSG2P11465 335 aa14.78□□□□□ -0.04
CLK4-211ENST00000522556 CPT2P23786 658 aa14.78□□□□□ -0.04
CLK4-211ENST00000522556 TGM4P49221 684 aa14.78□□□□□ -0.04
CLK4-211ENST00000522556 CCR9P51686 369 aa14.78□□□□□ -0.04
CLK4-211ENST00000522556 AQP4P55087 323 aa14.78□□□□□ -0.04
CLK4-211ENST00000522556 FGF12P61328 243 aa14.78□□□□□ -0.04
CLK4-211ENST00000522556 SLC34A1Q06495 639 aa14.78□□□□□ -0.04
CLK4-211ENST00000522556 ARMCX4Q5H9R4 360 aa14.78□□□□□ -0.04
CLK4-211ENST00000522556 BTN2A1Q7KYR7 527 aa14.78□□□□□ -0.04
CLK4-211ENST00000522556 POC1AQ8NBT0 407 aa14.78□□□□□ -0.04
CLK4-211ENST00000522556 ITFG2Q969R8 447 aa14.78□□□□□ -0.04
CLK4-211ENST00000522556 FGGYQ96C11 551 aa14.78□□□□□ -0.04
CLK4-211ENST00000522556 MRI1Q9BV20 369 aa14.78□□□□□ -0.04
CLK4-211ENST00000522556 JAM3Q9BX67 310 aa14.78□□□□□ -0.04
CLK4-211ENST00000522556 TRIM36Q9NQ86 728 aa14.78□□□□□ -0.04
CLK4-211ENST00000522556 INPP5EQ9NRR6 644 aa14.78□□□□□ -0.04
CLK4-211ENST00000522556 ZNF69Q9UC07 566 aa14.78□□□□□ -0.04
CLK4-211ENST00000522556 OR2AT4A6NND4 320 aa14.77□□□□□ -0.05
CLK4-211ENST00000522556 H0YAE9 185 aa14.77□□□□□ -0.05
CLK4-211ENST00000522556 NDUFA2O43678 99 aa14.77□□□□□ -0.05
CLK4-211ENST00000522556 PGA5P0DJD9 388 aa14.77□□□□□ -0.05
CLK4-211ENST00000522556 NPY4RP50391 375 aa14.77□□□□□ -0.05
CLK4-211ENST00000522556 DLX1P56177 255 aa14.77□□□□□ -0.05
CLK4-211ENST00000522556 PRB3Q04118 309 aaPredicted RBP14.77□□□□□ -0.05
CLK4-211ENST00000522556 KLHL22Q53GT1 634 aa14.77□□□□□ -0.05
CLK4-211ENST00000522556 TMEM244Q5VVB8 128 aa14.77□□□□□ -0.05
CLK4-211ENST00000522556 BTNL3Q6UXE8 466 aa14.77□□□□□ -0.05
CLK4-211ENST00000522556 ACP7Q6ZNF0 438 aa14.77□□□□□ -0.05
CLK4-211ENST00000522556 ZNF788Q6ZQV5 615 aa14.77□□□□□ -0.05
CLK4-211ENST00000522556 C8orf59Q8N0T1 100 aaPredicted RBP14.77□□□□□ -0.05
CLK4-211ENST00000522556 SETD9Q8NE22 299 aa14.77□□□□□ -0.05
CLK4-211ENST00000522556 FBLIM1Q8WUP2 373 aa14.77□□□□□ -0.05
CLK4-211ENST00000522556 TFAP2CQ92754 450 aa14.77□□□□□ -0.05
CLK4-211ENST00000522556 GGHQ92820 318 aa14.77□□□□□ -0.05
CLK4-211ENST00000522556 C12orf43Q96C57 262 aaKnown RBP14.77□□□□□ -0.05
CLK4-211ENST00000522556 MAB21L2Q9Y586 359 aa14.77□□□□□ -0.05
CLK4-211ENST00000522556 ENSAO43768 121 aaKnown RBP14.76□□□□□ -0.05
CLK4-211ENST00000522556 MPZP25189 248 aa14.76□□□□□ -0.05
CLK4-211ENST00000522556 GABRA2P47869 451 aa14.76□□□□□ -0.05
CLK4-211ENST00000522556 IL18R1Q13478 541 aa14.76□□□□□ -0.05
CLK4-211ENST00000522556 ATPAF1Q5TC12 328 aaPredicted RBP14.76□□□□□ -0.05
CLK4-211ENST00000522556 CRIP3Q6Q6R5 217 aa14.76□□□□□ -0.05
CLK4-211ENST00000522556 ZNF573Q86YE8 665 aa14.76□□□□□ -0.05
CLK4-211ENST00000522556 CD177Q8N6Q3 437 aa14.76□□□□□ -0.05
CLK4-211ENST00000522556 ZNF676Q8N7Q3 588 aa14.76□□□□□ -0.05
CLK4-211ENST00000522556 ZNRF1Q8ND25 227 aa14.76□□□□□ -0.05
CLK4-211ENST00000522556 OR13C3Q8NGS6 347 aa14.76□□□□□ -0.05
CLK4-211ENST00000522556 RFT1Q96AA3 541 aa14.76□□□□□ -0.05
CLK4-211ENST00000522556 TMIGD2Q96BF3 282 aa14.76□□□□□ -0.05
CLK4-211ENST00000522556 UPRTQ96BW1 309 aa14.76□□□□□ -0.05
CLK4-211ENST00000522556 ZNF48Q96MX3 618 aaPredicted RBP14.76□□□□□ -0.05
CLK4-211ENST00000522556 SPACA5Q96QH8 159 aa14.76□□□□□ -0.05
CLK4-211ENST00000522556 TBX15Q96SF7 602 aa14.76□□□□□ -0.05
CLK4-211ENST00000522556 NRIP2Q9BQI9 281 aa14.76□□□□□ -0.05
CLK4-211ENST00000522556 IL36RNQ9UBH0 155 aa14.76□□□□□ -0.05
CLK4-211ENST00000522556 RPUSD1Q9UJJ7 312 aaKnown RBP14.76□□□□□ -0.05
CLK4-211ENST00000522556 HHLA2Q9UM44 414 aa14.76□□□□□ -0.05
CLK4-211ENST00000522556 DIMT1Q9UNQ2 313 aaKnown RBP14.76□□□□□ -0.05
CLK4-211ENST00000522556 TCF21O43680 179 aa14.75□□□□□ -0.05
CLK4-211ENST00000522556 MMP9P14780 707 aa14.75□□□□□ -0.05
CLK4-211ENST00000522556 DCKP27707 260 aa14.75□□□□□ -0.05
CLK4-211ENST00000522556 ERVK11-1P61568 191 aa14.75□□□□□ -0.05
CLK4-211ENST00000522556 ASPHD2Q6ICH7 369 aa14.75□□□□□ -0.05
CLK4-211ENST00000522556 SLC36A1Q7Z2H8 476 aa14.75□□□□□ -0.05
CLK4-211ENST00000522556 ZFP41Q8N8Y5 198 aa14.75□□□□□ -0.05
CLK4-211ENST00000522556 OR13C9Q8NGT0 318 aa14.75□□□□□ -0.05
CLK4-211ENST00000522556 ZNF671Q8TAW3 534 aa14.75□□□□□ -0.05
CLK4-211ENST00000522556 SGCDQ92629 289 aa14.75□□□□□ -0.05
CLK4-211ENST00000522556 SLAMF9Q96A28 289 aa14.75□□□□□ -0.05
CLK4-211ENST00000522556 PCGF1Q9BSM1 259 aa14.75□□□□□ -0.05
CLK4-211ENST00000522556 SIRPDQ9H106 197 aa14.75□□□□□ -0.05
CLK4-211ENST00000522556 HES4Q9HCC6 221 aa14.75□□□□□ -0.05
CLK4-211ENST00000522556 ESM1Q9NQ30 184 aa14.75□□□□□ -0.05
CLK4-211ENST00000522556 MTCH1Q9NZJ7 389 aa14.75□□□□□ -0.05
CLK4-211ENST00000522556 MDFIC2A0A1B0GVS7 189 aa14.74□□□□□ -0.05
CLK4-211ENST00000522556 NKX6-3A6NJ46 265 aa14.74□□□□□ -0.05
CLK4-211ENST00000522556 RFPL4AA6NLU0 287 aa14.74□□□□□ -0.05
CLK4-211ENST00000522556 RFPL4AL1F8VTS6 287 aa14.74□□□□□ -0.05
CLK4-211ENST00000522556 SIGLEC5O15389 551 aa14.74□□□□□ -0.05
CLK4-211ENST00000522556 GATBO75879 557 aaKnown RBP14.74□□□□□ -0.05
CLK4-211ENST00000522556 ACAA1P09110 424 aaPredicted RBP14.74□□□□□ -0.05
CLK4-211ENST00000522556 CALCBP10092 127 aa14.74□□□□□ -0.05
CLK4-211ENST00000522556 ZNF20P17024 532 aa14.74□□□□□ -0.05
CLK4-211ENST00000522556 ATF1P18846 271 aa14.74□□□□□ -0.05
CLK4-211ENST00000522556 AZGP1P25311 298 aaKnown RBP14.74□□□□□ -0.05
CLK4-211ENST00000522556 GBX2P52951 348 aaPredicted RBP14.74□□□□□ -0.05
CLK4-211ENST00000522556 ARF6P62330 175 aa14.74□□□□□ -0.05
CLK4-211ENST00000522556 ST3GAL4Q11206 333 aa14.74□□□□□ -0.05
CLK4-211ENST00000522556 TUSC1Q2TAM9 212 aa14.74□□□□□ -0.05
CLK4-211ENST00000522556 RUSC1-AS1Q66K80 236 aa14.74□□□□□ -0.05
CLK4-211ENST00000522556 BRD3OSQ6XYD6 125 aa14.74□□□□□ -0.05
CLK4-211ENST00000522556 AHSA2Q719I0 299 aa14.74□□□□□ -0.05
CLK4-211ENST00000522556 ZNF485Q8NCK3 441 aa14.74□□□□□ -0.05
CLK4-211ENST00000522556 CCDC54Q8NEL0 328 aa14.74□□□□□ -0.05
CLK4-211ENST00000522556 OR13C5Q8NGS8 318 aa14.74□□□□□ -0.05
CLK4-211ENST00000522556 RPS4Y2Q8TD47 263 aa14.74□□□□□ -0.05
CLK4-211ENST00000522556 PP6455Q8WZ26 134 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms