RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 ZNF561Q8N587 486 aa7.87□□□□□ -1.15
CLK4-209ENST00000521621 RPL3LQ92901 407 aaKnown RBP7.87□□□□□ -1.15
CLK4-209ENST00000521621 ZCCHC4Q9H5U6 513 aa7.87□□□□□ -1.15
CLK4-209ENST00000521621 PPP1R3EQ9H7J1 279 aa7.87□□□□□ -1.15
CLK4-209ENST00000521621 UNKLQ9H9P5 680 aaKnown RBP7.87□□□□□ -1.15
CLK4-209ENST00000521621 UFSP2Q9NUQ7 469 aa7.87□□□□□ -1.15
CLK4-209ENST00000521621 CTSZQ9UBR2 303 aa7.87□□□□□ -1.15
CLK4-209ENST00000521621 CLN8Q9UBY8 286 aa7.87□□□□□ -1.15
CLK4-209ENST00000521621 AASSQ9UDR5 926 aa7.87□□□□□ -1.15
CLK4-209ENST00000521621 NSD1Q96L73 2696 aaPredicted RBP7.86□□□□□ -1.15
CLK4-209ENST00000521621 NKX6-3A6NJ46 265 aa7.86□□□□□ -1.15
CLK4-209ENST00000521621 A6NLC8 198 aa7.86□□□□□ -1.15
CLK4-209ENST00000521621 ZFPL1O95159 310 aa7.86□□□□□ -1.15
CLK4-209ENST00000521621 GNAO1P09471 354 aa7.86□□□□□ -1.15
CLK4-209ENST00000521621 CD80P33681 288 aa7.86□□□□□ -1.15
CLK4-209ENST00000521621 RBP2P50120 134 aa7.86□□□□□ -1.15
CLK4-209ENST00000521621 AQP4P55087 323 aa7.86□□□□□ -1.15
CLK4-209ENST00000521621 SLC35A2P78381 396 aa7.86□□□□□ -1.15
CLK4-209ENST00000521621 ST3GAL4Q11206 333 aa7.86□□□□□ -1.15
CLK4-209ENST00000521621 RBM48Q5RL73 367 aaKnown RBP7.86□□□□□ -1.15
CLK4-209ENST00000521621 ZNF826PQ6ZT77 177 aa7.86□□□□□ -1.15
CLK4-209ENST00000521621 PNLDC1Q8NA58 520 aaKnown RBP7.86□□□□□ -1.15
CLK4-209ENST00000521621 OR5D14Q8NGL3 314 aa7.86□□□□□ -1.15
CLK4-209ENST00000521621 DVL3Q92997 716 aaPredicted RBP7.86□□□□□ -1.15
CLK4-209ENST00000521621 YTHDF1Q9BYJ9 559 aaKnown RBP7.86□□□□□ -1.15
CLK4-209ENST00000521621 TTTY10Q9BZA0 68 aa7.86□□□□□ -1.15
CLK4-209ENST00000521621 ZNF281Q9Y2X9 895 aa7.86□□□□□ -1.15
CLK4-209ENST00000521621 TPRKBQ9Y3C4 175 aa7.86□□□□□ -1.15
CLK4-209ENST00000521621 KPTNQ9Y664 436 aa7.86□□□□□ -1.15
CLK4-209ENST00000521621 LOC105371242A0A075B767 164 aa7.86□□□□□ -1.15
CLK4-209ENST00000521621 ANKRD65E5RJM6 399 aa7.86□□□□□ -1.15
CLK4-209ENST00000521621 KDM4BO94953 1096 aa7.86□□□□□ -1.15
CLK4-209ENST00000521621 CD37P11049 281 aa7.86□□□□□ -1.15
CLK4-209ENST00000521621 VHLP40337 213 aa7.86□□□□□ -1.15
CLK4-209ENST00000521621 WNT4P56705 351 aa7.86□□□□□ -1.15
CLK4-209ENST00000521621 PDCD1Q15116 288 aa7.86□□□□□ -1.15
CLK4-209ENST00000521621 SPIN3Q5JUX0 258 aa7.86□□□□□ -1.15
CLK4-209ENST00000521621 ELP2Q6IA86 826 aa7.86□□□□□ -1.15
CLK4-209ENST00000521621 LYPD2Q6UXB3 125 aa7.86□□□□□ -1.15
CLK4-209ENST00000521621 NANPQ8TBE9 248 aa7.86□□□□□ -1.15
CLK4-209ENST00000521621 TBC1D15Q8TC07 691 aa7.86□□□□□ -1.15
CLK4-209ENST00000521621 GPR148Q8TDV2 347 aa7.86□□□□□ -1.15
CLK4-209ENST00000521621 TMIGD2Q96BF3 282 aa7.86□□□□□ -1.15
CLK4-209ENST00000521621 ADAT3Q96EY9 351 aaPredicted RBP7.86□□□□□ -1.15
CLK4-209ENST00000521621 GAFA1Q96PS6 74 aa7.86□□□□□ -1.15
CLK4-209ENST00000521621 MRI1Q9BV20 369 aa7.86□□□□□ -1.15
CLK4-209ENST00000521621 NCOR1P1Q9H4R4 102 aa7.86□□□□□ -1.15
CLK4-209ENST00000521621 GPR173Q9NS66 373 aa7.86□□□□□ -1.15
CLK4-209ENST00000521621 SCN3BQ9NY72 215 aa7.86□□□□□ -1.15
CLK4-209ENST00000521621 IL36GQ9NZH8 169 aa7.86□□□□□ -1.15
CLK4-209ENST00000521621 LSM2Q9Y333 95 aaKnown RBP7.86□□□□□ -1.15
CLK4-209ENST00000521621 IGKV1-9A0A0C4DH69 117 aa7.85□□□□□ -1.15
CLK4-209ENST00000521621 SLC1A7O00341 560 aa7.85□□□□□ -1.15
CLK4-209ENST00000521621 DENRO43583 198 aaKnown RBP7.85□□□□□ -1.15
CLK4-209ENST00000521621 CLIC3O95833 236 aa7.85□□□□□ -1.15
CLK4-209ENST00000521621 PLATP00750 562 aa7.85□□□□□ -1.15
CLK4-209ENST00000521621 RBP4P02753 201 aa7.85□□□□□ -1.15
CLK4-209ENST00000521621 ZNF20P17024 532 aa7.85□□□□□ -1.15
CLK4-209ENST00000521621 IGFBP3P17936 291 aaPredicted RBP7.85□□□□□ -1.15
CLK4-209ENST00000521621 IL13RA1P78552 427 aa7.85□□□□□ -1.15
CLK4-209ENST00000521621 PAX5Q02548 391 aa7.85□□□□□ -1.15
CLK4-209ENST00000521621 C1orf229Q6ZS94 237 aaPredicted RBP7.85□□□□□ -1.15
CLK4-209ENST00000521621 ZNF676Q8N7Q3 588 aa7.85□□□□□ -1.15
CLK4-209ENST00000521621 PXT1Q8NFP0 134 aa7.85□□□□□ -1.15
CLK4-209ENST00000521621 MND1Q9BWT6 205 aa7.85□□□□□ -1.15
CLK4-209ENST00000521621 TRBV5-7A0A0A0MS05 114 aa7.85□□□□□ -1.15
CLK4-209ENST00000521621 TRBV2A0A0J9YWF9 115 aa7.85□□□□□ -1.15
CLK4-209ENST00000521621 OR2AT4A6NND4 320 aa7.85□□□□□ -1.15
CLK4-209ENST00000521621 ZNF879B4DU55 563 aa7.85□□□□□ -1.15
CLK4-209ENST00000521621 E9PI62 339 aa7.85□□□□□ -1.15
CLK4-209ENST00000521621 H0YHG0 523 aa7.85□□□□□ -1.15
CLK4-209ENST00000521621 M0R1W7 72 aa7.85□□□□□ -1.15
CLK4-209ENST00000521621 SULT1B1O43704 296 aa7.85□□□□□ -1.15
CLK4-209ENST00000521621 AMY2BP19961 511 aa7.85□□□□□ -1.15
CLK4-209ENST00000521621 GLRA1P23415 457 aa7.85□□□□□ -1.15
CLK4-209ENST00000521621 GABARAPL2P60520 117 aa7.85□□□□□ -1.15
CLK4-209ENST00000521621 SEC61A1P61619 476 aaKnown RBP7.85□□□□□ -1.15
CLK4-209ENST00000521621 ZNF146Q15072 292 aa7.85□□□□□ -1.15
CLK4-209ENST00000521621 CRIP3Q6Q6R5 217 aa7.85□□□□□ -1.15
CLK4-209ENST00000521621 PRIMA1Q86XR5 153 aa7.85□□□□□ -1.15
CLK4-209ENST00000521621 OR13C3Q8NGS6 347 aa7.85□□□□□ -1.15
CLK4-209ENST00000521621 BORCS8Q96FH0 119 aa7.85□□□□□ -1.15
CLK4-209ENST00000521621 PGLYRP3Q96LB9 341 aa7.85□□□□□ -1.15
CLK4-209ENST00000521621 NUDT16L1Q9BRJ7 211 aaKnown RBP7.85□□□□□ -1.15
CLK4-209ENST00000521621 DCTN5Q9BTE1 182 aa7.85□□□□□ -1.15
CLK4-209ENST00000521621 AMBNQ9NP70 447 aa7.85□□□□□ -1.15
CLK4-209ENST00000521621 GTF2A1LQ9UNN4 478 aa7.85□□□□□ -1.15
CLK4-209ENST00000521621 FOXJ3Q9UPW0 622 aa7.85□□□□□ -1.15
CLK4-209ENST00000521621 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.84□□□□□ -1.154e-7■■■■■ 47
CLK4-209ENST00000521621 IGKV1D-17A0A075B6S4 117 aa7.84□□□□□ -1.15
CLK4-209ENST00000521621 IGKV1-27A0A075B6S5 117 aa7.84□□□□□ -1.15
CLK4-209ENST00000521621 hCG_1807616A0A1W2PRN6 198 aa7.84□□□□□ -1.15
CLK4-209ENST00000521621 ERICH4A6NGS2 130 aa7.84□□□□□ -1.15
CLK4-209ENST00000521621 ADAM20O43506 726 aa7.84□□□□□ -1.15
CLK4-209ENST00000521621 NDUFB3O43676 98 aa7.84□□□□□ -1.15
CLK4-209ENST00000521621 FCN3O75636 299 aa7.84□□□□□ -1.15
CLK4-209ENST00000521621 PSG2P11465 335 aa7.84□□□□□ -1.15
CLK4-209ENST00000521621 MMP9P14780 707 aa7.84□□□□□ -1.15
CLK4-209ENST00000521621 AZGP1P25311 298 aaKnown RBP7.84□□□□□ -1.15
CLK4-209ENST00000521621 LMO1P25800 156 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms