RNA–Protein interactions for RNA: ENST00000520746.1

HDAC2-208, Transcript of histone deacetylase 2, humanhuman

TSL 3

Gene HDAC2, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-208ENST00000520746 SCN3AQ9NY46 2000 aa2.41□□□□□ -2.02
HDAC2-208ENST00000520746 ATRQ13535 2644 aa2.4□□□□□ -2.02
HDAC2-208ENST00000520746 NCOA6Q14686 2063 aaPredicted RBP2.4□□□□□ -2.02
HDAC2-208ENST00000520746 AKAP6Q13023 2319 aa2.4□□□□□ -2.02
HDAC2-208ENST00000520746 CSPG4Q6UVK1 2322 aa2.4□□□□□ -2.02
HDAC2-208ENST00000520746 AKAP9Q99996 3911 aa2.4□□□□□ -2.03
HDAC2-208ENST00000520746 CIB4A0PJX0 185 aa2.4□□□□□ -2.03
HDAC2-208ENST00000520746 GOLGA6L10A6NI86 522 aa2.4□□□□□ -2.03
HDAC2-208ENST00000520746 SUPT3HB4E1H0 165 aa2.4□□□□□ -2.03
HDAC2-208ENST00000520746 TCF21O43680 179 aa2.4□□□□□ -2.03
HDAC2-208ENST00000520746 OR10H3O60404 316 aa2.4□□□□□ -2.03
HDAC2-208ENST00000520746 ZNF780AO75290 641 aaPredicted RBP2.4□□□□□ -2.03
HDAC2-208ENST00000520746 SUPT3HO75486 399 aa2.4□□□□□ -2.03
HDAC2-208ENST00000520746 EEDO75530 441 aaKnown RBP2.4□□□□□ -2.03
HDAC2-208ENST00000520746 TNFSF13O75888 250 aa2.4□□□□□ -2.03
HDAC2-208ENST00000520746 TTC4O95801 387 aa2.4□□□□□ -2.03
HDAC2-208ENST00000520746 KLK1P06870 262 aa2.4□□□□□ -2.03
HDAC2-208ENST00000520746 SOD3P08294 240 aa2.4□□□□□ -2.03
HDAC2-208ENST00000520746 MLNP12872 115 aa2.4□□□□□ -2.03
HDAC2-208ENST00000520746 HPGDP15428 266 aa2.4□□□□□ -2.03
HDAC2-208ENST00000520746 RPA2P15927 270 aa2.4□□□□□ -2.03
HDAC2-208ENST00000520746 ZNF708P17019 499 aa2.4□□□□□ -2.03
HDAC2-208ENST00000520746 ATP6V1B2P21281 511 aa2.4□□□□□ -2.03
HDAC2-208ENST00000520746 USF1P22415 310 aaPredicted RBP2.4□□□□□ -2.03
HDAC2-208ENST00000520746 ME2P23368 584 aa2.4□□□□□ -2.03
HDAC2-208ENST00000520746 COX7A1P24310 79 aa2.4□□□□□ -2.03
HDAC2-208ENST00000520746 SOX6P35712 828 aa2.4□□□□□ -2.03
HDAC2-208ENST00000520746 P2RY1P47900 373 aa2.4□□□□□ -2.03
HDAC2-208ENST00000520746 LHX2P50458 406 aa2.4□□□□□ -2.03
HDAC2-208ENST00000520746 DAP3P51398 398 aaKnown RBP2.4□□□□□ -2.03
HDAC2-208ENST00000520746 HNRNPA3P51991 378 aaKnown RBP2.4□□□□□ -2.03
HDAC2-208ENST00000520746 DSCR4P56555 118 aaPredicted RBP2.4□□□□□ -2.03
HDAC2-208ENST00000520746 CARD18P57730 90 aa2.4□□□□□ -2.03
HDAC2-208ENST00000520746 MRPS22P82650 360 aaKnown RBP2.4□□□□□ -2.03
HDAC2-208ENST00000520746 GTF3C1Q12789 2109 aa2.4□□□□□ -2.03
HDAC2-208ENST00000520746 DAZ2Q13117 558 aaKnown RBP2.4□□□□□ -2.03
HDAC2-208ENST00000520746 EBPQ15125 230 aaKnown RBP2.4□□□□□ -2.03
HDAC2-208ENST00000520746 TSNQ15631 228 aaKnown RBP2.4□□□□□ -2.03
HDAC2-208ENST00000520746 TSC22D1Q15714 1073 aa2.4□□□□□ -2.03
HDAC2-208ENST00000520746 BCL2A1Q16548 175 aa2.4□□□□□ -2.03
HDAC2-208ENST00000520746 NRF1Q16656 503 aa2.4□□□□□ -2.03
HDAC2-208ENST00000520746 TMEM249Q2WGJ8 235 aa2.4□□□□□ -2.03
HDAC2-208ENST00000520746 PAGE3Q5JUK9 113 aa2.4□□□□□ -2.03
HDAC2-208ENST00000520746 SPANXN3Q5MJ09 141 aa2.4□□□□□ -2.03
HDAC2-208ENST00000520746 C6orf52Q5T4I8 152 aa2.4□□□□□ -2.03
HDAC2-208ENST00000520746 C1orf146Q5VVC0 180 aa2.4□□□□□ -2.03
HDAC2-208ENST00000520746 ANKRD22Q5VYY1 191 aa2.4□□□□□ -2.03
HDAC2-208ENST00000520746 ADNP2Q6IQ32 1131 aa2.4□□□□□ -2.03
HDAC2-208ENST00000520746 PAGE2Q7Z2X7 111 aa2.4□□□□□ -2.03
HDAC2-208ENST00000520746 PDIK1LQ8N165 341 aa2.4□□□□□ -2.03
HDAC2-208ENST00000520746 CLEC4FQ8N1N0 589 aa2.4□□□□□ -2.03
HDAC2-208ENST00000520746 UBE2J2Q8N2K1 259 aa2.4□□□□□ -2.03
HDAC2-208ENST00000520746 TCAIMQ8N3R3 496 aa2.4□□□□□ -2.03
HDAC2-208ENST00000520746 RNF10Q8N5U6 811 aaKnown RBP2.4□□□□□ -2.03
HDAC2-208ENST00000520746 C20orf203Q8NBC4 194 aa2.4□□□□□ -2.03
HDAC2-208ENST00000520746 BBOF1Q8ND07 529 aa2.4□□□□□ -2.03
HDAC2-208ENST00000520746 ATP6V1C2Q8NEY4 427 aa2.4□□□□□ -2.03
HDAC2-208ENST00000520746 OR7G1Q8NGA0 311 aa2.4□□□□□ -2.03
HDAC2-208ENST00000520746 KCTD4Q8WVF5 259 aa2.4□□□□□ -2.03
HDAC2-208ENST00000520746 ST8SIA1Q92185 356 aa2.4□□□□□ -2.03
HDAC2-208ENST00000520746 TMBIM1Q969X1 311 aa2.4□□□□□ -2.03
HDAC2-208ENST00000520746 CHMP6Q96FZ7 201 aa2.4□□□□□ -2.03
HDAC2-208ENST00000520746 NAT9Q9BTE0 207 aa2.4□□□□□ -2.03
HDAC2-208ENST00000520746 C1QTNF6Q9BXI9 259 aa2.4□□□□□ -2.03
HDAC2-208ENST00000520746 MS4A8Q9BY19 250 aa2.4□□□□□ -2.03
HDAC2-208ENST00000520746 AICDAQ9GZX7 198 aa2.4□□□□□ -2.03
HDAC2-208ENST00000520746 CXorf21Q9HAI6 301 aa2.4□□□□□ -2.03
HDAC2-208ENST00000520746 LZTFL1Q9NQ48 299 aa2.4□□□□□ -2.03
HDAC2-208ENST00000520746 DAZ3Q9NR90 486 aaKnown RBP2.4□□□□□ -2.03
HDAC2-208ENST00000520746 NUDT15Q9NV35 164 aa2.4□□□□□ -2.03
HDAC2-208ENST00000520746 AIG1Q9NVV5 245 aa2.4□□□□□ -2.03
HDAC2-208ENST00000520746 LYARQ9NX58 379 aaKnown RBP2.4□□□□□ -2.03
HDAC2-208ENST00000520746 IL36GQ9NZH8 169 aa2.4□□□□□ -2.03
HDAC2-208ENST00000520746 MED11Q9P086 117 aa2.4□□□□□ -2.03
HDAC2-208ENST00000520746 AK6Q9Y3D8 172 aaKnown RBP2.4□□□□□ -2.03
HDAC2-208ENST00000520746 ZNF337Q9Y3M9 751 aa2.4□□□□□ -2.03
HDAC2-208ENST00000520746 HRNRQ86YZ3 2850 aaPredicted RBP2.4□□□□□ -2.03
HDAC2-208ENST00000520746 CACNA1CQ13936 2221 aa2.4□□□□□ -2.03
HDAC2-208ENST00000520746 RTTNQ86VV8 2226 aa2.4□□□□□ -2.03
HDAC2-208ENST00000520746 NUP210LQ5VU65 1888 aa2.39□□□□□ -2.03
HDAC2-208ENST00000520746 NSD1Q96L73 2696 aaPredicted RBP2.39□□□□□ -2.03
HDAC2-208ENST00000520746 A0A1B0GUS0 222 aa2.39□□□□□ -2.03
HDAC2-208ENST00000520746 PSMB11A5LHX3 300 aa2.39□□□□□ -2.03
HDAC2-208ENST00000520746 C9JVG2 144 aa2.39□□□□□ -2.03
HDAC2-208ENST00000520746 H0YC42 278 aa2.39□□□□□ -2.03
HDAC2-208ENST00000520746 ANGPT2O15123 496 aa2.39□□□□□ -2.03
HDAC2-208ENST00000520746 ACOX3O15254 700 aa2.39□□□□□ -2.03
HDAC2-208ENST00000520746 TAPBPO15533 448 aa2.39□□□□□ -2.03
HDAC2-208ENST00000520746 CXCL13O43927 109 aa2.39□□□□□ -2.03
HDAC2-208ENST00000520746 TBX19O60806 448 aa2.39□□□□□ -2.03
HDAC2-208ENST00000520746 UGT2B11O75310 529 aa2.39□□□□□ -2.03
HDAC2-208ENST00000520746 BANF1O75531 89 aa2.39□□□□□ -2.03
HDAC2-208ENST00000520746 AQP8O94778 261 aa2.39□□□□□ -2.03
HDAC2-208ENST00000520746 IGKV3-11P04433 115 aa2.39□□□□□ -2.03
HDAC2-208ENST00000520746 KRT8P05787 483 aa2.39□□□□□ -2.03
HDAC2-208ENST00000520746 RHOXF2BP0C7M4 288 aa2.39□□□□□ -2.03
HDAC2-208ENST00000520746 PABPC4LP0CB38 370 aaKnown RBP2.39□□□□□ -2.03
HDAC2-208ENST00000520746 GFAPP14136 432 aa2.39□□□□□ -2.03
HDAC2-208ENST00000520746 CPMP14384 443 aa2.39□□□□□ -2.03
HDAC2-208ENST00000520746 SLC25A16P16260 332 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms