RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 SSX6Q7RTT6 188 aa7.74□□□□□ -1.17
HDAC3-215ENST00000519474 SLC35F2Q8IXU6 374 aa7.74□□□□□ -1.17
HDAC3-215ENST00000519474 ELMOD2Q8IZ81 293 aa7.74□□□□□ -1.17
HDAC3-215ENST00000519474 FGFRL1Q8N441 504 aa7.74□□□□□ -1.17
HDAC3-215ENST00000519474 OR5A2Q8NGI9 324 aa7.74□□□□□ -1.17
HDAC3-215ENST00000519474 OR51E1Q8TCB6 317 aa7.74□□□□□ -1.17
HDAC3-215ENST00000519474 CHAC2Q8WUX2 184 aa7.74□□□□□ -1.17
HDAC3-215ENST00000519474 HPSE2Q8WWQ2 592 aa7.74□□□□□ -1.17
HDAC3-215ENST00000519474 PYDC1Q8WXC3 89 aa7.74□□□□□ -1.17
HDAC3-215ENST00000519474 RFKQ969G6 155 aa7.74□□□□□ -1.17
HDAC3-215ENST00000519474 EME1Q96AY2 570 aa7.74□□□□□ -1.17
HDAC3-215ENST00000519474 C1orf147Q96MC9 270 aaPredicted RBP7.74□□□□□ -1.17
HDAC3-215ENST00000519474 HIST1H2AAQ96QV6 131 aa7.74□□□□□ -1.17
HDAC3-215ENST00000519474 JMJD8Q96S16 334 aa7.74□□□□□ -1.17
HDAC3-215ENST00000519474 SLC29A1Q99808 456 aa7.74□□□□□ -1.17
HDAC3-215ENST00000519474 TTTY10Q9BZA0 68 aa7.74□□□□□ -1.17
HDAC3-215ENST00000519474 WDR12Q9GZL7 423 aaKnown RBP7.74□□□□□ -1.17
HDAC3-215ENST00000519474 MS4A7Q9GZW8 240 aaPredicted RBP7.74□□□□□ -1.17
HDAC3-215ENST00000519474 WDR13Q9H1Z4 485 aa7.74□□□□□ -1.17
HDAC3-215ENST00000519474 OR51I2Q9H344 312 aa7.74□□□□□ -1.17
HDAC3-215ENST00000519474 PRDM13Q9H4Q3 707 aa7.74□□□□□ -1.17
HDAC3-215ENST00000519474 CNTD2Q9H8S5 307 aa7.74□□□□□ -1.17
HDAC3-215ENST00000519474 TRIM36Q9NQ86 728 aa7.74□□□□□ -1.17
HDAC3-215ENST00000519474 CLN6Q9NWW5 311 aa7.74□□□□□ -1.17
HDAC3-215ENST00000519474 NUFIP1Q9UHK0 495 aaKnown RBP7.74□□□□□ -1.17
HDAC3-215ENST00000519474 MRM2Q9UI43 246 aaKnown RBP7.74□□□□□ -1.17
HDAC3-215ENST00000519474 SCOCQ9UIL1 159 aa7.74□□□□□ -1.17
HDAC3-215ENST00000519474 OAZ3Q9UMX2 235 aa7.74□□□□□ -1.17
HDAC3-215ENST00000519474 ERGIC3Q9Y282 383 aa7.74□□□□□ -1.17
HDAC3-215ENST00000519474 DNHD1Q96M86 4753 aa7.73□□□□□ -1.17
HDAC3-215ENST00000519474 A0A1B0GW55 424 aa7.73□□□□□ -1.17
HDAC3-215ENST00000519474 TMEM210A6NLX4 147 aa7.73□□□□□ -1.17
HDAC3-215ENST00000519474 ZNF879B4DU55 563 aa7.73□□□□□ -1.17
HDAC3-215ENST00000519474 ZNF732B4DXR9 585 aa7.73□□□□□ -1.17
HDAC3-215ENST00000519474 ZNF670-ZNF695F2Z2N8 137 aa7.73□□□□□ -1.17
HDAC3-215ENST00000519474 AKR7A2O43488 359 aa7.73□□□□□ -1.17
HDAC3-215ENST00000519474 RHBDL1O75783 438 aa7.73□□□□□ -1.17
HDAC3-215ENST00000519474 CIB2O75838 187 aa7.73□□□□□ -1.17
HDAC3-215ENST00000519474 GLAP06280 429 aa7.73□□□□□ -1.17
HDAC3-215ENST00000519474 OR2T7P0C7T2 308 aa7.73□□□□□ -1.17
HDAC3-215ENST00000519474 DUX4L2P0CJ85 424 aa7.73□□□□□ -1.17
HDAC3-215ENST00000519474 DUX4L3P0CJ86 424 aa7.73□□□□□ -1.17
HDAC3-215ENST00000519474 DUX4L4P0CJ87 422 aa7.73□□□□□ -1.17
HDAC3-215ENST00000519474 DUX4L5P0CJ88 424 aa7.73□□□□□ -1.17
HDAC3-215ENST00000519474 DUX4L6P0CJ89 424 aa7.73□□□□□ -1.17
HDAC3-215ENST00000519474 DUX4L7P0CJ90 424 aa7.73□□□□□ -1.17
HDAC3-215ENST00000519474 HTR1FP30939 366 aa7.73□□□□□ -1.17
HDAC3-215ENST00000519474 COMPP49747 757 aaPredicted RBP7.73□□□□□ -1.17
HDAC3-215ENST00000519474 ARF6P62330 175 aa7.73□□□□□ -1.17
HDAC3-215ENST00000519474 MFGE8Q08431 387 aaPredicted RBP7.73□□□□□ -1.17
HDAC3-215ENST00000519474 RIPPLY1Q0D2K3 151 aa7.73□□□□□ -1.17
HDAC3-215ENST00000519474 KPNB1Q14974 876 aaKnown RBP7.73□□□□□ -1.17
HDAC3-215ENST00000519474 CEACAM21Q3KPI0 293 aa7.73□□□□□ -1.17
HDAC3-215ENST00000519474 DUX4L9Q6RFH8 374 aaPredicted RBP7.73□□□□□ -1.17
HDAC3-215ENST00000519474 Q6ZSR3 168 aa7.73□□□□□ -1.17
HDAC3-215ENST00000519474 C9orf139Q6ZV77 190 aa7.73□□□□□ -1.17
HDAC3-215ENST00000519474 UTS2BQ765I0 119 aa7.73□□□□□ -1.17
HDAC3-215ENST00000519474 LY6G5BQ8NDX9 201 aa7.73□□□□□ -1.17
HDAC3-215ENST00000519474 SLC24A4Q8NFF2 622 aa7.73□□□□□ -1.17
HDAC3-215ENST00000519474 OR14K1Q8NGZ2 314 aa7.73□□□□□ -1.17
HDAC3-215ENST00000519474 OR2T27Q8NH04 317 aa7.73□□□□□ -1.17
HDAC3-215ENST00000519474 GCDHQ92947 438 aaPredicted RBP7.73□□□□□ -1.17
HDAC3-215ENST00000519474 FAM71F1Q96KD3 344 aaPredicted RBP7.73□□□□□ -1.17
HDAC3-215ENST00000519474 TECTBQ96PL2 329 aa7.73□□□□□ -1.17
HDAC3-215ENST00000519474 TBX15Q96SF7 602 aa7.73□□□□□ -1.17
HDAC3-215ENST00000519474 CNN2Q99439 309 aaKnown RBP7.73□□□□□ -1.17
HDAC3-215ENST00000519474 TXN2Q99757 166 aa7.73□□□□□ -1.17
HDAC3-215ENST00000519474 RTL8AQ9BWD3 113 aa7.73□□□□□ -1.17
HDAC3-215ENST00000519474 GABARAPL3Q9BY60 117 aa7.73□□□□□ -1.17
HDAC3-215ENST00000519474 PRRG3Q9BZD7 231 aa7.73□□□□□ -1.17
HDAC3-215ENST00000519474 GHITMQ9H3K2 345 aa7.73□□□□□ -1.17
HDAC3-215ENST00000519474 GPR84Q9NQS5 396 aa7.73□□□□□ -1.17
HDAC3-215ENST00000519474 SNTG1Q9NSN8 517 aa7.73□□□□□ -1.17
HDAC3-215ENST00000519474 DUX4Q9UBX2 424 aa7.73□□□□□ -1.17
HDAC3-215ENST00000519474 WARS2Q9UGM6 360 aaKnown RBP7.73□□□□□ -1.17
HDAC3-215ENST00000519474 IKZF2Q9UKS7 526 aa7.73□□□□□ -1.17
HDAC3-215ENST00000519474 SLC22A13Q9Y226 551 aa7.73□□□□□ -1.17
HDAC3-215ENST00000519474 CENPVL3A0A0U1RRI6 287 aa7.72□□□□□ -1.17
HDAC3-215ENST00000519474 ZNF816-ZNF321PA0A0X1KG74 233 aa7.72□□□□□ -1.17
HDAC3-215ENST00000519474 A0A1W2PQL4 384 aaPredicted RBP7.72□□□□□ -1.17
HDAC3-215ENST00000519474 LOC110117498-PIK3R3F6TDL0 507 aa7.72□□□□□ -1.17
HDAC3-215ENST00000519474 TMPRSS2O15393 492 aa7.72□□□□□ -1.17
HDAC3-215ENST00000519474 ENSAO43768 121 aaKnown RBP7.72□□□□□ -1.17
HDAC3-215ENST00000519474 TOX4O94842 621 aa7.72□□□□□ -1.17
HDAC3-215ENST00000519474 NRASP01111 189 aa7.72□□□□□ -1.17
HDAC3-215ENST00000519474 TFF1P04155 84 aa7.72□□□□□ -1.17
HDAC3-215ENST00000519474 ALPLP05186 524 aa7.72□□□□□ -1.17
HDAC3-215ENST00000519474 SFTPBP07988 381 aa7.72□□□□□ -1.17
HDAC3-215ENST00000519474 PRTN3P24158 256 aa7.72□□□□□ -1.17
HDAC3-215ENST00000519474 CFPP27918 469 aa7.72□□□□□ -1.17
HDAC3-215ENST00000519474 BMI1P35226 326 aa7.72□□□□□ -1.17
HDAC3-215ENST00000519474 GPM6AP51674 278 aa7.72□□□□□ -1.17
HDAC3-215ENST00000519474 P2RX3P56373 397 aa7.72□□□□□ -1.17
HDAC3-215ENST00000519474 EGR3Q06889 387 aa7.72□□□□□ -1.17
HDAC3-215ENST00000519474 BAMBIQ13145 260 aa7.72□□□□□ -1.17
HDAC3-215ENST00000519474 WDR38Q5JTN6 314 aa7.72□□□□□ -1.17
HDAC3-215ENST00000519474 C12orf54Q6X4T0 127 aa7.72□□□□□ -1.17
HDAC3-215ENST00000519474 ZNF788Q6ZQV5 615 aa7.72□□□□□ -1.17
HDAC3-215ENST00000519474 PLEKHG7Q6ZR37 379 aa7.72□□□□□ -1.17
HDAC3-215ENST00000519474 KCTD8Q6ZWB6 473 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms