RNA–Protein interactions for RNA: ENST00000518825.5

CTNNA1-210, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-210ENST00000518825 FOXRED2Q8IWF2 684 aa7.36□□□□□ -1.23
CTNNA1-210ENST00000518825 SULF2Q8IWU5 870 aa7.36□□□□□ -1.23
CTNNA1-210ENST00000518825 C20orf196Q8IYI0 205 aa7.36□□□□□ -1.23
CTNNA1-210ENST00000518825 MRPL24Q96A35 216 aaKnown RBP7.36□□□□□ -1.23
CTNNA1-210ENST00000518825 NECAB3Q96P71 396 aaPredicted RBP7.36□□□□□ -1.23
CTNNA1-210ENST00000518825 ZC4H2Q9NQZ6 224 aa7.36□□□□□ -1.23
CTNNA1-210ENST00000518825 MMP26Q9NRE1 261 aa7.36□□□□□ -1.23
CTNNA1-210ENST00000518825 UQCC1Q9NVA1 299 aa7.36□□□□□ -1.23
CTNNA1-210ENST00000518825 AMDHD2Q9Y303 409 aa7.36□□□□□ -1.23
CTNNA1-210ENST00000518825 LOC400499M0QZD8 3231 aa7.36□□□□□ -1.23
CTNNA1-210ENST00000518825 SHANK1Q9Y566 2161 aa7.36□□□□□ -1.23
CTNNA1-210ENST00000518825 RRP8O43159 456 aaKnown RBP7.36□□□□□ -1.23
CTNNA1-210ENST00000518825 NFYBP25208 207 aa7.36□□□□□ -1.23
CTNNA1-210ENST00000518825 GALNTL5Q7Z4T8 443 aa7.36□□□□□ -1.23
CTNNA1-210ENST00000518825 SULT4A1Q9BR01 284 aa7.36□□□□□ -1.23
CTNNA1-210ENST00000518825 ZNF700Q9H0M5 742 aa7.36□□□□□ -1.23
CTNNA1-210ENST00000518825 HRH4Q9H3N8 390 aa7.36□□□□□ -1.23
CTNNA1-210ENST00000518825 PLEK2Q9NYT0 353 aa7.36□□□□□ -1.23
CTNNA1-210ENST00000518825 C19orf25Q9UFG5 118 aaPredicted RBP7.36□□□□□ -1.23
CTNNA1-210ENST00000518825 AK3Q9UIJ7 227 aa7.36□□□□□ -1.23
CTNNA1-210ENST00000518825 CRYM-AS1A6NIL9 109 aa7.35□□□□□ -1.23
CTNNA1-210ENST00000518825 SFTPBP07988 381 aa7.35□□□□□ -1.23
CTNNA1-210ENST00000518825 FCGR3AP08637 254 aa7.35□□□□□ -1.23
CTNNA1-210ENST00000518825 DSCR4P56555 118 aaPredicted RBP7.35□□□□□ -1.23
CTNNA1-210ENST00000518825 S100A10P60903 97 aa7.35□□□□□ -1.23
CTNNA1-210ENST00000518825 PJVKQ0ZLH3 352 aa7.35□□□□□ -1.23
CTNNA1-210ENST00000518825 SURF2Q15527 256 aaPredicted RBP7.35□□□□□ -1.23
CTNNA1-210ENST00000518825 TAF9Q16594 264 aa7.35□□□□□ -1.23
CTNNA1-210ENST00000518825 KRTAP27-1Q3LI81 207 aa7.35□□□□□ -1.23
CTNNA1-210ENST00000518825 CHRFAM7AQ494W8 412 aa7.35□□□□□ -1.23
CTNNA1-210ENST00000518825 FAM27BQ5VT28 67 aa7.35□□□□□ -1.23
CTNNA1-210ENST00000518825 ZNF774Q6NX45 483 aa7.35□□□□□ -1.23
CTNNA1-210ENST00000518825 OR10Z1Q8NGY1 313 aa7.35□□□□□ -1.23
CTNNA1-210ENST00000518825 JSRP1Q96MG2 331 aaPredicted RBP7.35□□□□□ -1.23
CTNNA1-210ENST00000518825 CNTNAP3BQ96NU0 1288 aa7.35□□□□□ -1.23
CTNNA1-210ENST00000518825 IER2Q9BTL4 223 aa7.35□□□□□ -1.23
CTNNA1-210ENST00000518825 DUSP23Q9BVJ7 150 aa7.35□□□□□ -1.23
CTNNA1-210ENST00000518825 CNTNAP3Q9BZ76 1288 aa7.35□□□□□ -1.23
CTNNA1-210ENST00000518825 WDR54Q9H977 334 aa7.35□□□□□ -1.23
CTNNA1-210ENST00000518825 ELL3Q9HB65 397 aaPredicted RBP7.35□□□□□ -1.23
CTNNA1-210ENST00000518825 PLSCR2Q9NRY7 297 aa7.35□□□□□ -1.23
CTNNA1-210ENST00000518825 A0A087WZY1 265 aa7.35□□□□□ -1.23
CTNNA1-210ENST00000518825 F8W036 122 aa7.35□□□□□ -1.23
CTNNA1-210ENST00000518825 TP53I11O14683 189 aa7.35□□□□□ -1.23
CTNNA1-210ENST00000518825 TLX3O43711 291 aaPredicted RBP7.35□□□□□ -1.23
CTNNA1-210ENST00000518825 CA11O75493 328 aa7.35□□□□□ -1.23
CTNNA1-210ENST00000518825 IFNA2P01563 188 aa7.35□□□□□ -1.23
CTNNA1-210ENST00000518825 CPT2P23786 658 aa7.35□□□□□ -1.23
CTNNA1-210ENST00000518825 FKBP2P26885 142 aaKnown RBP7.35□□□□□ -1.23
CTNNA1-210ENST00000518825 OPRM1P35372 400 aa7.35□□□□□ -1.23
CTNNA1-210ENST00000518825 CLDN15P56746 228 aa7.35□□□□□ -1.23
CTNNA1-210ENST00000518825 BLOC1S1P78537 153 aa7.35□□□□□ -1.23
CTNNA1-210ENST00000518825 SP6Q3SY56 376 aa7.35□□□□□ -1.23
CTNNA1-210ENST00000518825 DHRS7BQ6IAN0 325 aaPredicted RBP7.35□□□□□ -1.23
CTNNA1-210ENST00000518825 H3F3CQ6NXT2 135 aa7.35□□□□□ -1.23
CTNNA1-210ENST00000518825 BTNL8Q6UX41 500 aa7.35□□□□□ -1.23
CTNNA1-210ENST00000518825 SVBPQ8N300 66 aa7.35□□□□□ -1.23
CTNNA1-210ENST00000518825 ARL11Q969Q4 196 aa7.35□□□□□ -1.23
CTNNA1-210ENST00000518825 ERGIC1Q969X5 290 aa7.35□□□□□ -1.23
CTNNA1-210ENST00000518825 RHOFQ9HBH0 211 aa7.35□□□□□ -1.23
CTNNA1-210ENST00000518825 PLEKHJ1Q9NW61 149 aa7.35□□□□□ -1.23
CTNNA1-210ENST00000518825 HPF1Q9NWY4 346 aa7.35□□□□□ -1.23
CTNNA1-210ENST00000518825 RCC2Q9P258 522 aaKnown RBP7.35□□□□□ -1.23
CTNNA1-210ENST00000518825 DNAJB11Q9UBS4 358 aa7.35□□□□□ -1.23
CTNNA1-210ENST00000518825 ANXA10Q9UJ72 324 aa7.35□□□□□ -1.23
CTNNA1-210ENST00000518825 TUBD1Q9UJT1 453 aa7.35□□□□□ -1.23
CTNNA1-210ENST00000518825 KLF2Q9Y5W3 355 aaPredicted RBP7.35□□□□□ -1.23
CTNNA1-210ENST00000518825 CCDC187A0A096LP49 1063 aa7.35□□□□□ -1.23
CTNNA1-210ENST00000518825 NPIPA2E9PIF3 369 aa7.35□□□□□ -1.23
CTNNA1-210ENST00000518825 NPIPA3F8WFD2 350 aa7.35□□□□□ -1.23
CTNNA1-210ENST00000518825 DEDDO75618 318 aa7.35□□□□□ -1.23
CTNNA1-210ENST00000518825 SERPINA5P05154 406 aa7.35□□□□□ -1.23
CTNNA1-210ENST00000518825 MTCP1P56278 107 aa7.35□□□□□ -1.23
CTNNA1-210ENST00000518825 IAH1Q2TAA2 248 aaPredicted RBP7.35□□□□□ -1.23
CTNNA1-210ENST00000518825 PIGYQ3MUY2 71 aa7.35□□□□□ -1.23
CTNNA1-210ENST00000518825 TSPO2Q5TGU0 170 aa7.35□□□□□ -1.23
CTNNA1-210ENST00000518825 GGNBP1Q5YKI7 109 aa7.35□□□□□ -1.23
CTNNA1-210ENST00000518825 C5orf24Q7Z6I8 188 aa7.35□□□□□ -1.23
CTNNA1-210ENST00000518825 GGNQ86UU5 652 aa7.35□□□□□ -1.23
CTNNA1-210ENST00000518825 CCDC36Q8IYA8 594 aa7.35□□□□□ -1.23
CTNNA1-210ENST00000518825 NRIP2Q9BQI9 281 aa7.35□□□□□ -1.23
CTNNA1-210ENST00000518825 TAF9BQ9HBM6 251 aa7.35□□□□□ -1.23
CTNNA1-210ENST00000518825 ZDHHC8Q9ULC8 765 aa7.35□□□□□ -1.23
CTNNA1-210ENST00000518825 FAM221AA4D161 298 aa7.34□□□□□ -1.23
CTNNA1-210ENST00000518825 CD5P06127 495 aa7.34□□□□□ -1.23
CTNNA1-210ENST00000518825 RFPL3SP0C7P2 107 aa7.34□□□□□ -1.23
CTNNA1-210ENST00000518825 IL32P24001 234 aa7.34□□□□□ -1.23
CTNNA1-210ENST00000518825 NOVA1P51513 510 aaKnown RBP7.34□□□□□ -1.23
CTNNA1-210ENST00000518825 CAV2P51636 162 aa7.34□□□□□ -1.23
CTNNA1-210ENST00000518825 MRPS34P82930 218 aaKnown RBP7.34□□□□□ -1.23
CTNNA1-210ENST00000518825 PDCD1Q15116 288 aa7.34□□□□□ -1.23
CTNNA1-210ENST00000518825 DHRS11Q6UWP2 260 aa7.34□□□□□ -1.23
CTNNA1-210ENST00000518825 ASCL4Q6XD76 172 aa7.34□□□□□ -1.23
CTNNA1-210ENST00000518825 ETV3LQ6ZN32 361 aa7.34□□□□□ -1.23
CTNNA1-210ENST00000518825 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.34□□□□□ -1.23
CTNNA1-210ENST00000518825 LINC00518Q8N0U6 118 aa7.34□□□□□ -1.23
CTNNA1-210ENST00000518825 IFI44Q8TCB0 444 aa7.34□□□□□ -1.23
CTNNA1-210ENST00000518825 SCGB3A2Q96PL1 93 aa7.34□□□□□ -1.23
CTNNA1-210ENST00000518825 SEC11CQ9BY50 192 aa7.34□□□□□ -1.23
CTNNA1-210ENST00000518825 ULBP2Q9BZM5 246 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms