RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 GTF2A1P52655 376 aaPredicted RBP10.99□□□□□ -0.65
VEGFA-219ENST00000518824 HILS1P60008 231 aa10.99□□□□□ -0.65
VEGFA-219ENST00000518824 ARF6P62330 175 aa10.99□□□□□ -0.65
VEGFA-219ENST00000518824 ALKBH1Q13686 389 aaKnown RBP10.99□□□□□ -0.65
VEGFA-219ENST00000518824 OGFRL1Q5TC84 451 aaPredicted RBP10.99□□□□□ -0.65
VEGFA-219ENST00000518824 XAF1Q6GPH4 301 aa10.99□□□□□ -0.65
VEGFA-219ENST00000518824 BRD3OSQ6XYD6 125 aa10.99□□□□□ -0.65
VEGFA-219ENST00000518824 ACP7Q6ZNF0 438 aa10.99□□□□□ -0.65
VEGFA-219ENST00000518824 CD177Q8N6Q3 437 aa10.99□□□□□ -0.65
VEGFA-219ENST00000518824 POC1AQ8NBT0 407 aa10.99□□□□□ -0.65
VEGFA-219ENST00000518824 FGGYQ96C11 551 aa10.99□□□□□ -0.65
VEGFA-219ENST00000518824 C1orf147Q96MC9 270 aaPredicted RBP10.99□□□□□ -0.65
VEGFA-219ENST00000518824 Q96MT0 163 aa10.99□□□□□ -0.65
VEGFA-219ENST00000518824 RDH12Q96NR8 316 aa10.99□□□□□ -0.65
VEGFA-219ENST00000518824 PCGF1Q9BSM1 259 aa10.99□□□□□ -0.65
VEGFA-219ENST00000518824 SIRPDQ9H106 197 aa10.99□□□□□ -0.65
VEGFA-219ENST00000518824 RPUSD1Q9UJJ7 312 aaKnown RBP10.99□□□□□ -0.65
VEGFA-219ENST00000518824 ERICH4A6NGS2 130 aa10.98□□□□□ -0.65
VEGFA-219ENST00000518824 DHRS7CA6NNS2 312 aa10.98□□□□□ -0.65
VEGFA-219ENST00000518824 ZNF879B4DU55 563 aa10.98□□□□□ -0.65
VEGFA-219ENST00000518824 J3QT63 122 aa10.98□□□□□ -0.65
VEGFA-219ENST00000518824 UBCP0CG48 685 aaKnown RBP10.98□□□□□ -0.65
VEGFA-219ENST00000518824 RAB40BQ12829 278 aa10.98□□□□□ -0.65
VEGFA-219ENST00000518824 DOC2BQ14184 412 aa10.98□□□□□ -0.65
VEGFA-219ENST00000518824 CRIP3Q6Q6R5 217 aa10.98□□□□□ -0.65
VEGFA-219ENST00000518824 SLC36A1Q7Z2H8 476 aa10.98□□□□□ -0.65
VEGFA-219ENST00000518824 KCTD20Q7Z5Y7 419 aa10.98□□□□□ -0.65
VEGFA-219ENST00000518824 BPIFB2Q8N4F0 458 aa10.98□□□□□ -0.65
VEGFA-219ENST00000518824 ZNRF1Q8ND25 227 aa10.98□□□□□ -0.65
VEGFA-219ENST00000518824 LY6G5BQ8NDX9 201 aa10.98□□□□□ -0.65
VEGFA-219ENST00000518824 SPATA3Q8NHX4 192 aa10.98□□□□□ -0.65
VEGFA-219ENST00000518824 ZNF671Q8TAW3 534 aa10.98□□□□□ -0.65
VEGFA-219ENST00000518824 ZNF418Q8TF45 676 aaPredicted RBP10.98□□□□□ -0.65
VEGFA-219ENST00000518824 NRG4Q8WWG1 115 aa10.98□□□□□ -0.65
VEGFA-219ENST00000518824 TAF15Q92804 592 aaKnown RBP eCLIP10.98□□□□□ -0.65
VEGFA-219ENST00000518824 ITFG2Q969R8 447 aa10.98□□□□□ -0.65
VEGFA-219ENST00000518824 TMIGD2Q96BF3 282 aa10.98□□□□□ -0.65
VEGFA-219ENST00000518824 C12orf43Q96C57 262 aaKnown RBP10.98□□□□□ -0.65
VEGFA-219ENST00000518824 ADI1Q9BV57 179 aa10.98□□□□□ -0.65
VEGFA-219ENST00000518824 CHST5Q9GZS9 411 aa10.98□□□□□ -0.65
VEGFA-219ENST00000518824 PLEKHA1Q9HB21 404 aa10.98□□□□□ -0.65
VEGFA-219ENST00000518824 FGF20Q9NP95 211 aaPredicted RBP10.98□□□□□ -0.65
VEGFA-219ENST00000518824 CLEC2DQ9UHP7 191 aa10.98□□□□□ -0.65
VEGFA-219ENST00000518824 RPL36Q9Y3U8 105 aaKnown RBP10.98□□□□□ -0.65
VEGFA-219ENST00000518824 PCDHGB1Q9Y5G3 927 aa10.98□□□□□ -0.65
VEGFA-219ENST00000518824 RFPL4AA6NLU0 287 aa10.97□□□□□ -0.65
VEGFA-219ENST00000518824 SNTNA6NMZ2 147 aa10.97□□□□□ -0.65
VEGFA-219ENST00000518824 RFPL4AL1F8VTS6 287 aa10.97□□□□□ -0.65
VEGFA-219ENST00000518824 SIGLEC5O15389 551 aa10.97□□□□□ -0.65
VEGFA-219ENST00000518824 NDUFB3O43676 98 aa10.97□□□□□ -0.65
VEGFA-219ENST00000518824 TOX4O94842 621 aa10.97□□□□□ -0.65
VEGFA-219ENST00000518824 FADS2O95864 444 aaKnown RBP10.97□□□□□ -0.65
VEGFA-219ENST00000518824 ISG15P05161 165 aa10.97□□□□□ -0.65
VEGFA-219ENST00000518824 ACAA1P09110 424 aaPredicted RBP10.97□□□□□ -0.65
VEGFA-219ENST00000518824 PPIAL4GP0DN37 164 aa10.97□□□□□ -0.65
VEGFA-219ENST00000518824 MPZP25189 248 aa10.97□□□□□ -0.65
VEGFA-219ENST00000518824 ERVK11-1P61568 191 aa10.97□□□□□ -0.65
VEGFA-219ENST00000518824 OR2G6Q5TZ20 316 aa10.97□□□□□ -0.65
VEGFA-219ENST00000518824 TMEM244Q5VVB8 128 aa10.97□□□□□ -0.65
VEGFA-219ENST00000518824 CD276Q5ZPR3 534 aa10.97□□□□□ -0.65
VEGFA-219ENST00000518824 ZNF573Q86YE8 665 aa10.97□□□□□ -0.65
VEGFA-219ENST00000518824 PDZD9Q8IXQ8 264 aa10.97□□□□□ -0.65
VEGFA-219ENST00000518824 DHRSXQ8N5I4 330 aa10.97□□□□□ -0.65
VEGFA-219ENST00000518824 TEX29Q8N6K0 151 aa10.97□□□□□ -0.65
VEGFA-219ENST00000518824 PACRGLQ8N7B6 248 aa10.97□□□□□ -0.65
VEGFA-219ENST00000518824 H1FXQ92522 213 aaKnown RBP10.97□□□□□ -0.65
VEGFA-219ENST00000518824 RGP1Q92546 391 aaPredicted RBP10.97□□□□□ -0.65
VEGFA-219ENST00000518824 SLAMF9Q96A28 289 aa10.97□□□□□ -0.65
VEGFA-219ENST00000518824 WDFY2Q96P53 400 aa10.97□□□□□ -0.65
VEGFA-219ENST00000518824 SPACA5Q96QH8 159 aa10.97□□□□□ -0.65
VEGFA-219ENST00000518824 PDCD1LG2Q9BQ51 273 aa10.97□□□□□ -0.65
VEGFA-219ENST00000518824 NRIP2Q9BQI9 281 aa10.97□□□□□ -0.65
VEGFA-219ENST00000518824 DCTN5Q9BTE1 182 aa10.97□□□□□ -0.65
VEGFA-219ENST00000518824 HES4Q9HCC6 221 aa10.97□□□□□ -0.65
VEGFA-219ENST00000518824 MTCH1Q9NZJ7 389 aa10.97□□□□□ -0.65
VEGFA-219ENST00000518824 IL36RNQ9UBH0 155 aa10.97□□□□□ -0.65
VEGFA-219ENST00000518824 SIRT4Q9Y6E7 314 aaPredicted RBP10.97□□□□□ -0.65
VEGFA-219ENST00000518824 A0A0A6YYJ9 748 aa10.96□□□□□ -0.65
VEGFA-219ENST00000518824 CENPVL3A0A0U1RRI6 287 aa10.96□□□□□ -0.65
VEGFA-219ENST00000518824 NOS1APO75052 506 aaPredicted RBP10.96□□□□□ -0.65
VEGFA-219ENST00000518824 ZFPL1O95159 310 aa10.96□□□□□ -0.65
VEGFA-219ENST00000518824 LALBAP00709 142 aa10.96□□□□□ -0.65
VEGFA-219ENST00000518824 CALCBP10092 127 aa10.96□□□□□ -0.65
VEGFA-219ENST00000518824 ATF1P18846 271 aa10.96□□□□□ -0.65
VEGFA-219ENST00000518824 CCR9P51686 369 aa10.96□□□□□ -0.65
VEGFA-219ENST00000518824 ACTA2P62736 377 aa10.96□□□□□ -0.65
VEGFA-219ENST00000518824 ACTG2P63267 376 aa10.96□□□□□ -0.65
VEGFA-219ENST00000518824 IL13RA1P78552 427 aa10.96□□□□□ -0.65
VEGFA-219ENST00000518824 TTC23Q5W5X9 447 aa10.96□□□□□ -0.65
VEGFA-219ENST00000518824 USP43Q70EL4 1123 aa10.96□□□□□ -0.65
VEGFA-219ENST00000518824 SYS1Q8N2H4 156 aa10.96□□□□□ -0.65
VEGFA-219ENST00000518824 Q8N7P7 452 aa10.96□□□□□ -0.65
VEGFA-219ENST00000518824 RFT1Q96AA3 541 aa10.96□□□□□ -0.65
VEGFA-219ENST00000518824 SUCNR1Q9BXA5 334 aa10.96□□□□□ -0.65
VEGFA-219ENST00000518824 MS4A7Q9GZW8 240 aaPredicted RBP10.96□□□□□ -0.65
VEGFA-219ENST00000518824 CNTD2Q9H8S5 307 aa10.96□□□□□ -0.65
VEGFA-219ENST00000518824 SLC25A10Q9UBX3 287 aaPredicted RBP10.96□□□□□ -0.65
VEGFA-219ENST00000518824 NKX6-3A6NJ46 265 aa10.95□□□□□ -0.66
VEGFA-219ENST00000518824 SPRY1O43609 319 aaPredicted RBP10.95□□□□□ -0.66
VEGFA-219ENST00000518824 XPNPEP2O43895 674 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms