RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 H0YGG7 62 aa3.51□□□□□ -1.85
HMGB1P23-201ENST00000518743 CALUO43852 315 aaPredicted RBP3.51□□□□□ -1.85
HMGB1P23-201ENST00000518743 MYO1DO94832 1006 aa3.51□□□□□ -1.85
HMGB1P23-201ENST00000518743 STAMBPO95630 424 aa3.51□□□□□ -1.85
HMGB1P23-201ENST00000518743 OTCP00480 354 aa3.51□□□□□ -1.85
HMGB1P23-201ENST00000518743 MYL2P10916 166 aa3.51□□□□□ -1.85
HMGB1P23-201ENST00000518743 STOMP27105 288 aa3.51□□□□□ -1.85
HMGB1P23-201ENST00000518743 SLC1A1P43005 524 aa3.51□□□□□ -1.85
HMGB1P23-201ENST00000518743 VEGFCP49767 419 aa3.51□□□□□ -1.85
HMGB1P23-201ENST00000518743 SNRPD2P62316 118 aaKnown RBP3.51□□□□□ -1.85
HMGB1P23-201ENST00000518743 NSUN5P1Q3KNT7 163 aa3.51□□□□□ -1.85
HMGB1P23-201ENST00000518743 C22orf42Q6IC83 251 aa3.51□□□□□ -1.85
HMGB1P23-201ENST00000518743 FAM151BQ6UXP7 276 aa3.51□□□□□ -1.85
HMGB1P23-201ENST00000518743 BAIAP2L2Q6UXY1 529 aa3.51□□□□□ -1.85
HMGB1P23-201ENST00000518743 Q6ZN92 141 aa3.51□□□□□ -1.85
HMGB1P23-201ENST00000518743 PRSS41Q7RTY9 318 aa3.51□□□□□ -1.85
HMGB1P23-201ENST00000518743 ACOT4Q8N9L9 421 aa3.51□□□□□ -1.85
HMGB1P23-201ENST00000518743 OR10G3Q8NGC4 313 aa3.51□□□□□ -1.85
HMGB1P23-201ENST00000518743 NEIL2Q969S2 332 aa3.51□□□□□ -1.85
HMGB1P23-201ENST00000518743 PRRC1Q96M27 445 aa3.51□□□□□ -1.85
HMGB1P23-201ENST00000518743 OXGR1Q96P68 337 aa3.51□□□□□ -1.85
HMGB1P23-201ENST00000518743 PANX1Q96RD7 426 aa3.51□□□□□ -1.85
HMGB1P23-201ENST00000518743 KLHDC3Q9BQ90 382 aa3.51□□□□□ -1.85
HMGB1P23-201ENST00000518743 PAXXQ9BUH6 204 aa3.51□□□□□ -1.85
HMGB1P23-201ENST00000518743 Q9H3A6 140 aa3.51□□□□□ -1.85
HMGB1P23-201ENST00000518743 INPP5EQ9NRR6 644 aa3.51□□□□□ -1.85
HMGB1P23-201ENST00000518743 DMAC2Q9NW81 257 aa3.51□□□□□ -1.85
HMGB1P23-201ENST00000518743 TREM2Q9NZC2 230 aa3.51□□□□□ -1.85
HMGB1P23-201ENST00000518743 CLCF1Q9UBD9 225 aa3.51□□□□□ -1.85
HMGB1P23-201ENST00000518743 DNAJC12Q9UKB3 198 aa3.51□□□□□ -1.85
HMGB1P23-201ENST00000518743 DOCK11Q5JSL3 2073 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 HEATR5BQ9P2D3 2071 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 IGHV3OR16-13A0A075B7E8 117 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 KBTBD11-OT1A0A1B0GTJ5 212 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 E7EQL1 145 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 H7C0C1 242 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 EMC8O43402 210 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 ZNF254O75437 659 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 CLPXO76031 633 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 TBX6O95947 436 aaPredicted RBP3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 ACTL6AO96019 429 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 IL1RNP18510 177 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 TCN1P20061 433 aaPredicted RBP3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 CD1BP29016 333 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 CASQ1P31415 396 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 SDC4P31431 198 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 DEKP35659 375 aaKnown RBP3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 CDKN1BP46527 198 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 CDK9P50750 372 aaKnown RBP3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 BIDP55957 195 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 CLDN8P56748 225 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 ADARB1P78563 741 aaKnown RBP3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 CXCL6P80162 114 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 STK38Q15208 465 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 TSC22D1Q15714 1073 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 STK11Q15831 433 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 Q1RN00 199 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 GSG1Q2KHT4 349 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 PTPN20Q4JDL3 420 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 GPR157Q5UAW9 335 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 MARC1Q5VT66 337 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 OPN5Q6U736 354 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 SASS6Q6UVJ0 657 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 SBSNQ6UWP8 590 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 ZNF571Q7Z3V5 609 aaPredicted RBP3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 PIANPQ8IYJ0 282 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 OR51S1Q8NGJ8 323 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 OR13F1Q8NGS4 319 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 CLDND2Q8NHS1 167 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 RHEBL1Q8TAI7 183 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 GPX8Q8TED1 209 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 ISOC1Q96CN7 298 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 DCUN1D1Q96GG9 259 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 CSPG4P5Q96PW8 444 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 OR8B4Q96RC9 309 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 LYSMD1Q96S90 227 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 IL22Q9GZX6 179 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 EHD1Q9H4M9 534 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 ELOVL6Q9H5J4 265 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 UGT1A10Q9HAW8 530 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 TMEM165Q9HC07 324 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 LZTFL1Q9NQ48 299 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 CLN8Q9UBY8 286 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 TBC1D24Q9ULP9 559 aa3.5□□□□□ -1.85
HMGB1P23-201ENST00000518743 PKHD1P08F94 4074 aa3.49□□□□□ -1.85
HMGB1P23-201ENST00000518743 ARHGAP32A7KAX9 2087 aa3.49□□□□□ -1.85
HMGB1P23-201ENST00000518743 J3QLI3 93 aa3.49□□□□□ -1.85
HMGB1P23-201ENST00000518743 TXNDC9O14530 226 aa3.49□□□□□ -1.85
HMGB1P23-201ENST00000518743 GOSR2O14653 212 aa3.49□□□□□ -1.85
HMGB1P23-201ENST00000518743 RAB29O14966 203 aa3.49□□□□□ -1.85
HMGB1P23-201ENST00000518743 RDH16O75452 317 aa3.49□□□□□ -1.85
HMGB1P23-201ENST00000518743 MPZL1O95297 269 aa3.49□□□□□ -1.85
HMGB1P23-201ENST00000518743 C1orf105O95561 183 aa3.49□□□□□ -1.85
HMGB1P23-201ENST00000518743 CGAP01215 116 aa3.49□□□□□ -1.85
HMGB1P23-201ENST00000518743 S100A9P06702 114 aaKnown RBP3.49□□□□□ -1.85
HMGB1P23-201ENST00000518743 OR8U8P0C7N1 319 aa3.49□□□□□ -1.85
HMGB1P23-201ENST00000518743 NPR2P20594 1047 aa3.49□□□□□ -1.85
HMGB1P23-201ENST00000518743 PSMB5P28074 263 aa3.49□□□□□ -1.85
HMGB1P23-201ENST00000518743 CD151P48509 253 aa3.49□□□□□ -1.85
HMGB1P23-201ENST00000518743 CTBP2P56545 445 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms