RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 KLF17Q5JT82 389 aaPredicted RBP2.44□□□□□ -2.02
VPS13B-207ENST00000518569 SOHLH1Q5JUK2 328 aa2.44□□□□□ -2.02
VPS13B-207ENST00000518569 LY6G6FQ5SQ64 297 aa2.44□□□□□ -2.02
VPS13B-207ENST00000518569 SYPL2Q5VXT5 272 aa2.44□□□□□ -2.02
VPS13B-207ENST00000518569 ELP2Q6IA86 826 aa2.44□□□□□ -2.02
VPS13B-207ENST00000518569 C11orf71Q6IPW1 123 aa2.44□□□□□ -2.02
VPS13B-207ENST00000518569 NIPAL1Q6NVV3 410 aa2.44□□□□□ -2.02
VPS13B-207ENST00000518569 TRIM40Q6P9F5 258 aa2.44□□□□□ -2.02
VPS13B-207ENST00000518569 CD200R1LQ6Q8B3 271 aa2.44□□□□□ -2.02
VPS13B-207ENST00000518569 SLC36A1Q7Z2H8 476 aa2.44□□□□□ -2.02
VPS13B-207ENST00000518569 LYG2Q86SG7 212 aa2.44□□□□□ -2.02
VPS13B-207ENST00000518569 RIMKLAQ8IXN7 391 aa2.44□□□□□ -2.02
VPS13B-207ENST00000518569 CMTM1Q8IZ96 169 aa2.44□□□□□ -2.02
VPS13B-207ENST00000518569 PUSL1Q8N0Z8 303 aaKnown RBP2.44□□□□□ -2.02
VPS13B-207ENST00000518569 ZNF561Q8N587 486 aa2.44□□□□□ -2.02
VPS13B-207ENST00000518569 TMEM161BQ8NDZ6 487 aa2.44□□□□□ -2.02
VPS13B-207ENST00000518569 OR4K2Q8NGD2 314 aa2.44□□□□□ -2.02
VPS13B-207ENST00000518569 OR5L2Q8NGL0 311 aa2.44□□□□□ -2.02
VPS13B-207ENST00000518569 BLOC1S5Q8TDH9 187 aa2.44□□□□□ -2.02
VPS13B-207ENST00000518569 RNASEH2CQ8TDP1 164 aaKnown RBP2.44□□□□□ -2.02
VPS13B-207ENST00000518569 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.44□□□□□ -2.02
VPS13B-207ENST00000518569 RERGQ96A58 199 aaPredicted RBP2.44□□□□□ -2.02
VPS13B-207ENST00000518569 RPEQ96AT9 228 aa2.44□□□□□ -2.02
VPS13B-207ENST00000518569 TESCQ96BS2 214 aa2.44□□□□□ -2.02
VPS13B-207ENST00000518569 TLCD1Q96CP7 247 aa2.44□□□□□ -2.02
VPS13B-207ENST00000518569 MED8Q96G25 268 aa2.44□□□□□ -2.02
VPS13B-207ENST00000518569 ZNF799Q96GE5 643 aa2.44□□□□□ -2.02
VPS13B-207ENST00000518569 SFRP2Q96HF1 295 aa2.44□□□□□ -2.02
VPS13B-207ENST00000518569 PGLYRP4Q96LB8 373 aa2.44□□□□□ -2.02
VPS13B-207ENST00000518569 KCTD7Q96MP8 289 aa2.44□□□□□ -2.02
VPS13B-207ENST00000518569 OR2V2Q96R30 315 aa2.44□□□□□ -2.02
VPS13B-207ENST00000518569 APOL4Q9BPW4 351 aa2.44□□□□□ -2.02
VPS13B-207ENST00000518569 ZNF670Q9BS34 389 aa2.44□□□□□ -2.02
VPS13B-207ENST00000518569 BCL2L14Q9BZR8 327 aa2.44□□□□□ -2.02
VPS13B-207ENST00000518569 SELENOIQ9C0D9 397 aa2.44□□□□□ -2.02
VPS13B-207ENST00000518569 TLNRD1Q9H1K6 362 aa2.44□□□□□ -2.02
VPS13B-207ENST00000518569 OR51M1Q9H341 326 aa2.44□□□□□ -2.02
VPS13B-207ENST00000518569 RRAGDQ9NQL2 400 aaPredicted RBP2.44□□□□□ -2.02
VPS13B-207ENST00000518569 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.44□□□□□ -2.02
VPS13B-207ENST00000518569 SIGLEC8Q9NYZ4 499 aa2.44□□□□□ -2.02
VPS13B-207ENST00000518569 TREM2Q9NZC2 230 aa2.44□□□□□ -2.02
VPS13B-207ENST00000518569 FAM32AQ9Y421 112 aaKnown RBP2.44□□□□□ -2.02
VPS13B-207ENST00000518569 UGT2A1Q9Y4X1 527 aa2.44□□□□□ -2.02
VPS13B-207ENST00000518569 SNX10Q9Y5X0 201 aa2.44□□□□□ -2.02
VPS13B-207ENST00000518569 MTCH2Q9Y6C9 303 aa2.44□□□□□ -2.02
VPS13B-207ENST00000518569 NRAPQ86VF7 1730 aa2.44□□□□□ -2.02
VPS13B-207ENST00000518569 NID2Q14112 1375 aa2.44□□□□□ -2.02
VPS13B-207ENST00000518569 RTL9Q8NET4 1388 aa2.44□□□□□ -2.02
VPS13B-207ENST00000518569 CCNB3Q8WWL7 1395 aa2.44□□□□□ -2.02
VPS13B-207ENST00000518569 TNRC18O15417 2968 aaPredicted RBP2.44□□□□□ -2.02
VPS13B-207ENST00000518569 PCDH11XQ9BZA7 1347 aa2.43□□□□□ -2.02
VPS13B-207ENST00000518569 ZFYVE9O95405 1425 aa2.43□□□□□ -2.02
VPS13B-207ENST00000518569 ADGRB3O60242 1522 aa2.43□□□□□ -2.02
VPS13B-207ENST00000518569 USP32Q8NFA0 1604 aa2.43□□□□□ -2.02
VPS13B-207ENST00000518569 EIF2AK4Q9P2K8 1649 aaKnown RBP2.43□□□□□ -2.02
VPS13B-207ENST00000518569 PRSS37A4D1T9 235 aa2.43□□□□□ -2.02
VPS13B-207ENST00000518569 USP27XA6NNY8 438 aa2.43□□□□□ -2.02
VPS13B-207ENST00000518569 HACD1B0YJ81 288 aa2.43□□□□□ -2.02
VPS13B-207ENST00000518569 CCRL2O00421 344 aa2.43□□□□□ -2.02
VPS13B-207ENST00000518569 PLPP1O14494 284 aa2.43□□□□□ -2.02
VPS13B-207ENST00000518569 CDIPTO14735 213 aa2.43□□□□□ -2.02
VPS13B-207ENST00000518569 SLC31A2O15432 143 aa2.43□□□□□ -2.02
VPS13B-207ENST00000518569 EIF4E2O60573 245 aaKnown RBP2.43□□□□□ -2.02
VPS13B-207ENST00000518569 ALOX12BO75342 701 aa2.43□□□□□ -2.02
VPS13B-207ENST00000518569 SULT1C4O75897 302 aa2.43□□□□□ -2.02
VPS13B-207ENST00000518569 LSM8O95777 96 aaKnown RBP2.43□□□□□ -2.02
VPS13B-207ENST00000518569 IGHG4P01861 327 aa2.43□□□□□ -2.02
VPS13B-207ENST00000518569 HBE1P02100 147 aa2.43□□□□□ -2.02
VPS13B-207ENST00000518569 GAPDHP04406 335 aaKnown RBP2.43□□□□□ -2.02
VPS13B-207ENST00000518569 BCHEP06276 602 aa2.43□□□□□ -2.02
VPS13B-207ENST00000518569 ZNF35P13682 527 aa2.43□□□□□ -2.02
VPS13B-207ENST00000518569 HTR1EP28566 365 aa2.43□□□□□ -2.02
VPS13B-207ENST00000518569 IL12AP29459 219 aa2.43□□□□□ -2.02
VPS13B-207ENST00000518569 FGF9P31371 208 aaPredicted RBP2.43□□□□□ -2.02
VPS13B-207ENST00000518569 RPA3P35244 121 aaPredicted RBP2.43□□□□□ -2.02
VPS13B-207ENST00000518569 NUDT1P36639 197 aa2.43□□□□□ -2.02
VPS13B-207ENST00000518569 RBMXP38159 391 aaKnown RBP2.43□□□□□ -2.02
VPS13B-207ENST00000518569 VHLP40337 213 aa2.43□□□□□ -2.02
VPS13B-207ENST00000518569 LEPP41159 167 aa2.43□□□□□ -2.02
VPS13B-207ENST00000518569 TTPAP49638 278 aa2.43□□□□□ -2.02
VPS13B-207ENST00000518569 SULT1A1P50225 295 aa2.43□□□□□ -2.02
VPS13B-207ENST00000518569 SULT1A2P50226 295 aa2.43□□□□□ -2.02
VPS13B-207ENST00000518569 RAB25P57735 213 aa2.43□□□□□ -2.02
VPS13B-207ENST00000518569 RAB2AP61019 212 aa2.43□□□□□ -2.02
VPS13B-207ENST00000518569 MLLT11Q13015 90 aaPredicted RBP2.43□□□□□ -2.02
VPS13B-207ENST00000518569 DAZ2Q13117 558 aaKnown RBP2.43□□□□□ -2.02
VPS13B-207ENST00000518569 MAD2L1BPQ15013 274 aaPredicted RBP2.43□□□□□ -2.02
VPS13B-207ENST00000518569 TAL2Q16559 108 aa2.43□□□□□ -2.02
VPS13B-207ENST00000518569 RPEL1Q2QD12 228 aa2.43□□□□□ -2.02
VPS13B-207ENST00000518569 TTLL9Q3SXZ7 439 aa2.43□□□□□ -2.02
VPS13B-207ENST00000518569 SLC25A52Q3SY17 297 aa2.43□□□□□ -2.02
VPS13B-207ENST00000518569 TP53I3Q53FA7 332 aa2.43□□□□□ -2.02
VPS13B-207ENST00000518569 SPIN4Q56A73 249 aa2.43□□□□□ -2.02
VPS13B-207ENST00000518569 TIMM23BQ5SRD1 257 aa2.43□□□□□ -2.02
VPS13B-207ENST00000518569 C1orf220Q5T0J3 134 aa2.43□□□□□ -2.02
VPS13B-207ENST00000518569 CASC10Q5T4H9 136 aa2.43□□□□□ -2.02
VPS13B-207ENST00000518569 APOBEC3HQ6NTF7 200 aaKnown RBP2.43□□□□□ -2.02
VPS13B-207ENST00000518569 RWDD4Q6NW29 188 aaKnown RBP2.43□□□□□ -2.02
VPS13B-207ENST00000518569 C3orf62Q6ZUJ4 267 aa2.43□□□□□ -2.02
VPS13B-207ENST00000518569 WDFY1Q8IWB7 410 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 130.9 ms