RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 ZGRF1Q86YA3 2104 aa2.36□□□□□ -2.03
SKP1-204ENST00000517691 WDFY1Q8IWB7 410 aa2.36□□□□□ -2.03
SKP1-204ENST00000517691 C10orf67Q8IYJ2 551 aa2.36□□□□□ -2.03
SKP1-204ENST00000517691 FGFRL1Q8N441 504 aa2.36□□□□□ -2.03
SKP1-204ENST00000517691 ICA1LQ8NDH6 482 aa2.36□□□□□ -2.03
SKP1-204ENST00000517691 CPEB3Q8NE35 698 aaKnown RBP2.36□□□□□ -2.03
SKP1-204ENST00000517691 OR10G2Q8NGC3 310 aa2.36□□□□□ -2.03
SKP1-204ENST00000517691 OR52L1Q8NGH7 329 aa2.36□□□□□ -2.03
SKP1-204ENST00000517691 OR4C15Q8NGM1 316 aa2.36□□□□□ -2.03
SKP1-204ENST00000517691 OR1K1Q8NGR3 316 aa2.36□□□□□ -2.03
SKP1-204ENST00000517691 SPRYD4Q8WW59 207 aaPredicted RBP2.36□□□□□ -2.03
SKP1-204ENST00000517691 PYDC1Q8WXC3 89 aa2.36□□□□□ -2.03
SKP1-204ENST00000517691 ASB10Q8WXI3 467 aa2.36□□□□□ -2.03
SKP1-204ENST00000517691 STMN2Q93045 179 aa2.36□□□□□ -2.03
SKP1-204ENST00000517691 OTULINQ96BN8 352 aa2.36□□□□□ -2.03
SKP1-204ENST00000517691 RAB39BQ96DA2 213 aa2.36□□□□□ -2.03
SKP1-204ENST00000517691 LURAP1Q96LR2 239 aa2.36□□□□□ -2.03
SKP1-204ENST00000517691 Q96M85 177 aa2.36□□□□□ -2.03
SKP1-204ENST00000517691 ERMAPQ96PL5 475 aaPredicted RBP2.36□□□□□ -2.03
SKP1-204ENST00000517691 TSPAN32Q96QS1 320 aa2.36□□□□□ -2.03
SKP1-204ENST00000517691 RBP7Q96R05 134 aa2.36□□□□□ -2.03
SKP1-204ENST00000517691 SH3GL3Q99963 347 aa2.36□□□□□ -2.03
SKP1-204ENST00000517691 BDH2Q9BUT1 245 aa2.36□□□□□ -2.03
SKP1-204ENST00000517691 LINC00470Q9BZP3 86 aa2.36□□□□□ -2.03
SKP1-204ENST00000517691 SEMA6AQ9H2E6 1030 aa2.36□□□□□ -2.03
SKP1-204ENST00000517691 EGLN3Q9H6Z9 239 aa2.36□□□□□ -2.03
SKP1-204ENST00000517691 RNF121Q9H920 327 aa2.36□□□□□ -2.03
SKP1-204ENST00000517691 SLC17A5Q9NRA2 495 aa2.36□□□□□ -2.03
SKP1-204ENST00000517691 VNN3Q9NY84 501 aa2.36□□□□□ -2.03
SKP1-204ENST00000517691 NPAP1Q9NZP6 1156 aa2.36□□□□□ -2.03
SKP1-204ENST00000517691 PIPOXQ9P0Z9 390 aa2.36□□□□□ -2.03
SKP1-204ENST00000517691 SIGLEC7Q9Y286 467 aa2.36□□□□□ -2.03
SKP1-204ENST00000517691 PUS1Q9Y606 427 aaKnown RBP eCLIP2.36□□□□□ -2.03
SKP1-204ENST00000517691 KPTNQ9Y664 436 aa2.36□□□□□ -2.03
SKP1-204ENST00000517691 CELSR2Q9HCU4 2923 aa2.36□□□□□ -2.03
SKP1-204ENST00000517691 DNAJC13O75165 2243 aa2.36□□□□□ -2.03
SKP1-204ENST00000517691 ZNF99A8MXY4 864 aaPredicted RBP2.35□□□□□ -2.03
SKP1-204ENST00000517691 F8VVB4 439 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 F8VWA3 439 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 G3V2T6 193 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 RPL36A-HNRNPH2H7BZ11 118 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 H7C1Q1 480 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 PDLIM1O00151 329 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 CCL24O00175 119 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 TOR1AO14656 332 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 SIVA1O15304 175 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 SLC16A7O60669 478 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 FZD7O75084 574 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 ENTPD5O75356 428 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 OR2F2O95006 317 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 TACC2O95359 2948 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 FARS2O95363 451 aaKnown RBP2.35□□□□□ -2.03
SKP1-204ENST00000517691 SOX14O95416 240 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 SLC2A10O95528 541 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 RAB36O95755 333 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 RENP00797 406 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 HLA-HP01893 362 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 MT-ND2P03891 347 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 FCER2P06734 321 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 SFTPBP07988 381 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 CD14P08571 375 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 PATE4P0C8F1 98 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 PGA4P0DJD7 388 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 PGA3P0DJD8 388 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 DBTP11182 482 aaKnown RBP2.35□□□□□ -2.03
SKP1-204ENST00000517691 NR2C1P13056 603 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 ZNF23P17027 643 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 ZNF26P17031 533 aaPredicted RBP2.35□□□□□ -2.03
SKP1-204ENST00000517691 COX5AP20674 150 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 CRYGSP22914 178 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 ACKR3P25106 362 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 PSMB6P28072 239 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 CCKARP32238 428 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 DUTP33316 252 aaKnown RBP2.35□□□□□ -2.03
SKP1-204ENST00000517691 ID1P41134 155 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 GSSP48637 474 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 GDI2P50395 445 aaKnown RBP2.35□□□□□ -2.03
SKP1-204ENST00000517691 P2RX3P56373 397 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 POLR2GP62487 172 aaKnown RBP eCLIP2.35□□□□□ -2.03
SKP1-204ENST00000517691 RPS4XP62701 263 aaKnown RBP2.35□□□□□ -2.03
SKP1-204ENST00000517691 FMODQ06828 376 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 BSPH1Q075Z2 132 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 PNRC1Q12796 327 aaPredicted RBP2.35□□□□□ -2.03
SKP1-204ENST00000517691 FHL1Q13642 323 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 GK3PQ14409 553 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 DAZAP2Q15038 168 aaPredicted RBP2.35□□□□□ -2.03
SKP1-204ENST00000517691 ATP6AP1Q15904 470 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 ANXA2RQ3ZCQ2 193 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 C6orf226Q5I0X4 101 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 ZFP1Q6P2D0 407 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 LEG1Q6P5S2 330 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 SLC16A14Q7RTX9 510 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 DPY19L4Q7Z388 723 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 TMEM179BQ7Z7N9 219 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 STX12Q86Y82 276 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 HIPK1Q86Z02 1210 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 ADGRG4Q8IZF6 3080 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 HS3ST5Q8IZT8 346 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 PARP8Q8N3A8 854 aa2.35□□□□□ -2.03
SKP1-204ENST00000517691 LNX2Q8N448 690 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms