RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 OR8U9P0C7N5 309 aa4.24□□□□□ -1.73
HMGB1P19-201ENST00000517578 ARSAP15289 507 aa4.24□□□□□ -1.73
HMGB1P19-201ENST00000517578 GOT1P17174 413 aa4.24□□□□□ -1.73
HMGB1P19-201ENST00000517578 EN2P19622 333 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P19-201ENST00000517578 GDF1P27539 372 aa4.24□□□□□ -1.73
HMGB1P19-201ENST00000517578 MDH2P40926 338 aaKnown RBP4.24□□□□□ -1.73
HMGB1P19-201ENST00000517578 CSNK1A1P48729 337 aa4.24□□□□□ -1.73
HMGB1P19-201ENST00000517578 PRLHRP49683 370 aa4.24□□□□□ -1.73
HMGB1P19-201ENST00000517578 CNN1P51911 297 aaKnown RBP4.24□□□□□ -1.73
HMGB1P19-201ENST00000517578 EFNA5P52803 228 aa4.24□□□□□ -1.73
HMGB1P19-201ENST00000517578 PLP1P60201 277 aa4.24□□□□□ -1.73
HMGB1P19-201ENST00000517578 SRPXP78539 464 aa4.24□□□□□ -1.73
HMGB1P19-201ENST00000517578 LCN2P80188 198 aa4.24□□□□□ -1.73
HMGB1P19-201ENST00000517578 RPL24P83731 157 aaKnown RBP4.24□□□□□ -1.73
HMGB1P19-201ENST00000517578 PMP22Q01453 160 aa4.24□□□□□ -1.73
HMGB1P19-201ENST00000517578 ST3GAL3Q11203 375 aa4.24□□□□□ -1.73
HMGB1P19-201ENST00000517578 MMDQ15546 238 aa4.24□□□□□ -1.73
HMGB1P19-201ENST00000517578 CEBPEQ15744 281 aa4.24□□□□□ -1.73
HMGB1P19-201ENST00000517578 TBR1Q16650 682 aa4.24□□□□□ -1.73
HMGB1P19-201ENST00000517578 IAH1Q2TAA2 248 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P19-201ENST00000517578 MIDNQ504T8 468 aa4.24□□□□□ -1.73
HMGB1P19-201ENST00000517578 ALG10Q5BKT4 473 aa4.24□□□□□ -1.73
HMGB1P19-201ENST00000517578 RNASE12Q5GAN4 147 aaKnown RBP4.24□□□□□ -1.73
HMGB1P19-201ENST00000517578 ZNF776Q68DI1 518 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P19-201ENST00000517578 TMEM200BQ69YZ2 307 aa4.24□□□□□ -1.73
HMGB1P19-201ENST00000517578 SLC8B1Q6J4K2 584 aa4.24□□□□□ -1.73
HMGB1P19-201ENST00000517578 MRPL54Q6P161 138 aaKnown RBP4.24□□□□□ -1.73
HMGB1P19-201ENST00000517578 PAQR6Q6TCH4 344 aa4.24□□□□□ -1.73
HMGB1P19-201ENST00000517578 Q6ZN92 141 aa4.24□□□□□ -1.73
HMGB1P19-201ENST00000517578 APOBEC3FQ8IUX4 373 aaKnown RBP4.24□□□□□ -1.73
HMGB1P19-201ENST00000517578 ZFP41Q8N8Y5 198 aa4.24□□□□□ -1.73
HMGB1P19-201ENST00000517578 OR4N2Q8NGD1 307 aa4.24□□□□□ -1.73
HMGB1P19-201ENST00000517578 OR52R1Q8NGF1 315 aa4.24□□□□□ -1.73
HMGB1P19-201ENST00000517578 OR4C16Q8NGL9 310 aa4.24□□□□□ -1.73
HMGB1P19-201ENST00000517578 ZNF519Q8TB69 540 aa4.24□□□□□ -1.73
HMGB1P19-201ENST00000517578 SYNPRQ8TBG9 265 aa4.24□□□□□ -1.73
HMGB1P19-201ENST00000517578 PTPMT1Q8WUK0 201 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P19-201ENST00000517578 ASB10Q8WXI3 467 aa4.24□□□□□ -1.73
HMGB1P19-201ENST00000517578 NDRG1Q92597 394 aaKnown RBP4.24□□□□□ -1.73
HMGB1P19-201ENST00000517578 DDIT4LQ96D03 193 aa4.24□□□□□ -1.73
HMGB1P19-201ENST00000517578 NEIL1Q96FI4 390 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P19-201ENST00000517578 C16orf92Q96LL3 132 aa4.24□□□□□ -1.73
HMGB1P19-201ENST00000517578 C2orf50Q96LR7 162 aa4.24□□□□□ -1.73
HMGB1P19-201ENST00000517578 SLC46A1Q96NT5 459 aa4.24□□□□□ -1.73
HMGB1P19-201ENST00000517578 TSPAN32Q96QS1 320 aa4.24□□□□□ -1.73
HMGB1P19-201ENST00000517578 P2RX4Q99571 388 aa4.24□□□□□ -1.73
HMGB1P19-201ENST00000517578 FOXB1Q99853 325 aa4.24□□□□□ -1.73
HMGB1P19-201ENST00000517578 NICN1Q9BSH3 213 aa4.24□□□□□ -1.73
HMGB1P19-201ENST00000517578 ABHD6Q9BV23 337 aa4.24□□□□□ -1.73
HMGB1P19-201ENST00000517578 VCX2Q9H322 139 aa4.24□□□□□ -1.73
HMGB1P19-201ENST00000517578 FZD8Q9H461 694 aa4.24□□□□□ -1.73
HMGB1P19-201ENST00000517578 MTHFD2LQ9H903 347 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P19-201ENST00000517578 IL21RQ9HBE5 538 aa4.24□□□□□ -1.73
HMGB1P19-201ENST00000517578 Q9N2K0 584 aa4.24□□□□□ -1.73
HMGB1P19-201ENST00000517578 HIF1ANQ9NWT6 349 aa4.24□□□□□ -1.73
HMGB1P19-201ENST00000517578 SH2B3Q9UQQ2 575 aa4.24□□□□□ -1.73
HMGB1P19-201ENST00000517578 FUT9Q9Y231 359 aa4.24□□□□□ -1.73
HMGB1P19-201ENST00000517578 KCNK6Q9Y257 313 aa4.24□□□□□ -1.73
HMGB1P19-201ENST00000517578 CCL27Q9Y4X3 112 aa4.24□□□□□ -1.73
HMGB1P19-201ENST00000517578 A0A0G2JMZ2 1700 aa4.24□□□□□ -1.73
HMGB1P19-201ENST00000517578 LRRC37A2A6NM11 1700 aa4.24□□□□□ -1.73
HMGB1P19-201ENST00000517578 LRRC37AA6NMS7 1700 aa4.24□□□□□ -1.73
HMGB1P19-201ENST00000517578 SBF2Q86WG5 1849 aa4.23□□□□□ -1.73
HMGB1P19-201ENST00000517578 SNED1Q8TER0 1413 aa4.23□□□□□ -1.73
HMGB1P19-201ENST00000517578 STRCP1A6NGW2 1772 aa4.23□□□□□ -1.73
HMGB1P19-201ENST00000517578 TMEM272A0A1B0GTI8 110 aa4.23□□□□□ -1.73
HMGB1P19-201ENST00000517578 A0A1B0GW15 77 aa4.23□□□□□ -1.73
HMGB1P19-201ENST00000517578 OR6C6A6NF89 314 aa4.23□□□□□ -1.73
HMGB1P19-201ENST00000517578 HIDE1A8MVS5 230 aa4.23□□□□□ -1.73
HMGB1P19-201ENST00000517578 C9JQL5 133 aa4.23□□□□□ -1.73
HMGB1P19-201ENST00000517578 K7EQM0 130 aa4.23□□□□□ -1.73
HMGB1P19-201ENST00000517578 M0QZ24 198 aa4.23□□□□□ -1.73
HMGB1P19-201ENST00000517578 RNASET2O00584 256 aaKnown RBP4.23□□□□□ -1.73
HMGB1P19-201ENST00000517578 GEMIN2O14893 280 aaKnown RBP4.23□□□□□ -1.73
HMGB1P19-201ENST00000517578 MPPED1O15442 326 aa4.23□□□□□ -1.73
HMGB1P19-201ENST00000517578 ZNF207O43670 478 aaKnown RBP4.23□□□□□ -1.73
HMGB1P19-201ENST00000517578 B4GALT2O60909 372 aa4.23□□□□□ -1.73
HMGB1P19-201ENST00000517578 C1QL1O75973 258 aa4.23□□□□□ -1.73
HMGB1P19-201ENST00000517578 NDUFB8O95169 186 aa4.23□□□□□ -1.73
HMGB1P19-201ENST00000517578 SEMA4FO95754 770 aa4.23□□□□□ -1.73
HMGB1P19-201ENST00000517578 TYMSP04818 313 aa4.23□□□□□ -1.73
HMGB1P19-201ENST00000517578 SERPINA7P05543 415 aa4.23□□□□□ -1.73
HMGB1P19-201ENST00000517578 ERGP11308 486 aa4.23□□□□□ -1.73
HMGB1P19-201ENST00000517578 COX7A2P14406 83 aa4.23□□□□□ -1.73
HMGB1P19-201ENST00000517578 ST6GAL1P15907 406 aa4.23□□□□□ -1.73
HMGB1P19-201ENST00000517578 AKR1C4P17516 323 aa4.23□□□□□ -1.73
HMGB1P19-201ENST00000517578 TCN2P20062 427 aa4.23□□□□□ -1.73
HMGB1P19-201ENST00000517578 DRD1P21728 446 aa4.23□□□□□ -1.73
HMGB1P19-201ENST00000517578 ADRA1AP35348 466 aa4.23□□□□□ -1.73
HMGB1P19-201ENST00000517578 PTGER4P35408 488 aa4.23□□□□□ -1.73
HMGB1P19-201ENST00000517578 SRP14P37108 136 aaKnown RBP4.23□□□□□ -1.73
HMGB1P19-201ENST00000517578 GYG1P46976 350 aa4.23□□□□□ -1.73
HMGB1P19-201ENST00000517578 GPR12P47775 334 aa4.23□□□□□ -1.73
HMGB1P19-201ENST00000517578 ARRB1P49407 418 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P19-201ENST00000517578 FLT3LGP49771 235 aa4.23□□□□□ -1.73
HMGB1P19-201ENST00000517578 GPM6AP51674 278 aa4.23□□□□□ -1.73
HMGB1P19-201ENST00000517578 PDX1P52945 283 aa4.23□□□□□ -1.73
HMGB1P19-201ENST00000517578 PNLIPRP1P54315 467 aa4.23□□□□□ -1.73
HMGB1P19-201ENST00000517578 MTCP1P56278 107 aa4.23□□□□□ -1.73
HMGB1P19-201ENST00000517578 ZXDBP98169 803 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms