RNA–Protein interactions for RNA: ENST00000517256.1

SNORA40.17-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 115 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.17-201ENST00000517256 IGHV3OR16-9A0A0B4J2B5 98 aa-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 LOC107984156A0A0G2JMH3 177 aa-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 LOC105371045A0A1W2PR82 267 aa-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 XKRY2A2RUG3 117 aa-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 MEIS3P1A6NDR6 274 aa-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 OR2T8A6NH00 312 aa-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 ARGFXA6NJG6 315 aa-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 F8W036 122 aa-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 TRAPPC2LH3BP13 241 aa-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 K7ERS5 55 aa-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 SLC17A3O00476 420 aa-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 BTN3A3O00478 584 aa-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 GOSR2O14653 212 aa-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 RNF113AO15541 343 aaKnown RBP-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 GNRH2O43555 120 aa-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 OR1F1O43749 312 aa-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 SLC25A20O43772 301 aa-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 SOX15O60248 233 aa-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 DNAJB6O75190 326 aa-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 SEC22BO75396 215 aa-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 IGKV1-5P01602 117 aa-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 HLA-AP01891 365 aaKnown RBP-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 FGGP02679 453 aa-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 CRYGDP07320 174 aa-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 ERCC1P07992 297 aaPredicted RBP-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 ABHD2P08910 425 aa-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 CTSEP14091 401 aa-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 GABRA1P14867 456 aa-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 NCF2P19878 526 aaPredicted RBP-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 SPRR2EP22531 72 aa-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 CYP2F1P24903 491 aa-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 GGT2P36268 569 aa-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 NUP62P37198 522 aaPredicted RBP-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 SLC18A1P54219 525 aa-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 AQP4P55087 323 aa-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 FOXA3P55318 350 aaPredicted RBP-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 SNU13P55769 128 aaKnown RBP-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 FBXW4P57775 412 aa-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 SLC35A2P78381 396 aa-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 SCN1BQ07699 218 aa-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 TWF1Q12792 350 aa-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 QPRTQ15274 297 aa-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 ELOCQ15369 112 aa-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 OR7A5Q15622 319 aa-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 ARHGAP11BQ3KRB8 267 aa-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 C1orf185Q5T7R7 199 aa-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 PRAMEF20Q5VT98 475 aa-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 PYHIN1Q6K0P9 492 aa-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 NIPAL3Q6P499 406 aa-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 FAM173BQ6P4H8 233 aa-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 UQCC3Q6UW78 93 aa-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 ZYG11AQ6WRX3 759 aa-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 WDR88Q6ZMY6 472 aa-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 SDIM1Q6ZPB5 146 aa-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 C4orf50Q6ZRC1 276 aa-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 CCDC73Q6ZRK6 1079 aa-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 ZCCHC23Q6ZST2 131 aa-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 SLC25A48Q6ZT89 311 aaKnown RBP-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 OTUD6AQ7L8S5 288 aa-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 MARCH3Q86UD3 253 aa-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 CBLN2Q8IUK8 224 aa-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 NUDCD3Q8IVD9 361 aa-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 ARL17AQ8IVW1 177 aa-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 SLC38A6Q8IZM9 456 aa-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 CENPLQ8N0S6 344 aaPredicted RBP-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 GABRG1Q8N1C3 465 aa-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 Q8N814 137 aa-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 OR9K2Q8NGE7 335 aa-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 OR52E2Q8NGJ4 325 aa-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 OR51T1Q8NGJ9 327 aa-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 OR4D5Q8NGN0 318 aa-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 FAM213BQ8TBF2 198 aa-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 UBE2Q2Q8WVN8 375 aa-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 MBD3L1Q8WWY6 194 aa-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 RERGQ96A58 199 aaPredicted RBP-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 RAB3IPQ96QF0 476 aaPredicted RBP-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 OR5B12Q96R08 314 aa-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 SH3GL1Q99961 368 aa-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 MICU1Q9BPX6 476 aa-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 TMEM117Q9H0C3 514 aa-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 TRABDQ9H4I3 376 aa-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 TMEM231Q9H6L2 316 aa-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 NHEJ1Q9H9Q4 299 aaPredicted RBP-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 ROPN1Q9HAT0 212 aaPredicted RBP-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 RHOFQ9HBH0 211 aa-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 ANKHQ9HCJ1 492 aa-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 ACP6Q9NPH0 428 aa-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 HOMER3Q9NSC5 361 aa-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 TXNL4BQ9NX01 149 aaKnown RBP-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 PIPOXQ9P0Z9 390 aa-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 FBXL3Q9UKT7 428 aa-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 FBXW2Q9UKT8 454 aa-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 NUP50Q9UKX7 468 aa-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 STX8Q9UNK0 236 aa-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 HES2Q9Y543 173 aa-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 ZNF706Q9Y5V0 76 aaPredicted RBP-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 PUS1Q9Y606 427 aaKnown RBP eCLIP-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 FAT3Q8TDW7 4589 aa-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 MROH5Q6ZUA9 1318 aa-0.95□□□□□ -2.56
SNORA40.17-201ENST00000517256 MCM3APO60318 1980 aa-0.96□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms