RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 DDX19AQ9NUU7 478 aaKnown RBP3.08□□□□□ -1.92
RNU4-60P-201ENST00000517239 VPREB3Q9UKI3 123 aa3.08□□□□□ -1.92
RNU4-60P-201ENST00000517239 TRAPPC4Q9Y296 219 aa3.08□□□□□ -1.92
RNU4-60P-201ENST00000517239 PYGO1Q9Y3Y4 419 aa3.08□□□□□ -1.92
RNU4-60P-201ENST00000517239 C2orf16Q68DN1 1984 aa3.08□□□□□ -1.92
RNU4-60P-201ENST00000517239 ZBED9Q6R2W3 1325 aa3.08□□□□□ -1.92
RNU4-60P-201ENST00000517239 PLEKHG1Q9ULL1 1385 aa3.08□□□□□ -1.92
RNU4-60P-201ENST00000517239 SYNMO15061 1565 aa3.08□□□□□ -1.92
RNU4-60P-201ENST00000517239 SMIM26A0A096LP01 95 aa3.07□□□□□ -1.92
RNU4-60P-201ENST00000517239 TRAV8-6A0A0B4J262 113 aa3.07□□□□□ -1.92
RNU4-60P-201ENST00000517239 IGHV3-16A0A0C4DH30 117 aa3.07□□□□□ -1.92
RNU4-60P-201ENST00000517239 PMS2P5A8MQ11 134 aa3.07□□□□□ -1.92
RNU4-60P-201ENST00000517239 EVPLLA8MZ36 301 aa3.07□□□□□ -1.92
RNU4-60P-201ENST00000517239 H0Y9J4 135 aa3.07□□□□□ -1.92
RNU4-60P-201ENST00000517239 MYL12BO14950 172 aa3.07□□□□□ -1.92
RNU4-60P-201ENST00000517239 TBL1XO60907 577 aa3.07□□□□□ -1.92
RNU4-60P-201ENST00000517239 VENTXO95231 258 aa3.07□□□□□ -1.92
RNU4-60P-201ENST00000517239 SNAPINO95295 136 aa3.07□□□□□ -1.92
RNU4-60P-201ENST00000517239 THY1P04216 161 aa3.07□□□□□ -1.92
RNU4-60P-201ENST00000517239 MRPL3P09001 348 aaKnown RBP3.07□□□□□ -1.92
RNU4-60P-201ENST00000517239 KCNE1P15382 129 aa3.07□□□□□ -1.92
RNU4-60P-201ENST00000517239 HTR1EP28566 365 aa3.07□□□□□ -1.92
RNU4-60P-201ENST00000517239 SERPINB1P30740 379 aa3.07□□□□□ -1.92
RNU4-60P-201ENST00000517239 CDK9P50750 372 aaKnown RBP3.07□□□□□ -1.92
RNU4-60P-201ENST00000517239 CRYBA4P53673 196 aa3.07□□□□□ -1.92
RNU4-60P-201ENST00000517239 TAS2R43P59537 309 aa3.07□□□□□ -1.92
RNU4-60P-201ENST00000517239 REG3AQ06141 175 aa3.07□□□□□ -1.92
RNU4-60P-201ENST00000517239 CD300CQ08708 224 aa3.07□□□□□ -1.92
RNU4-60P-201ENST00000517239 TCP10Q12799 353 aa3.07□□□□□ -1.92
RNU4-60P-201ENST00000517239 PON3Q15166 354 aa3.07□□□□□ -1.92
RNU4-60P-201ENST00000517239 LRRC26Q2I0M4 334 aa3.07□□□□□ -1.92
RNU4-60P-201ENST00000517239 ZNF630Q2M218 657 aaPredicted RBP3.07□□□□□ -1.92
RNU4-60P-201ENST00000517239 LIN52Q52LA3 116 aa3.07□□□□□ -1.92
RNU4-60P-201ENST00000517239 OR2B11Q5JQS5 317 aa3.07□□□□□ -1.92
RNU4-60P-201ENST00000517239 NHLRC3Q5JS37 347 aa3.07□□□□□ -1.92
RNU4-60P-201ENST00000517239 ADAMTSL4-AS1Q5T5F5 129 aa3.07□□□□□ -1.92
RNU4-60P-201ENST00000517239 AVPI1Q5T686 147 aa3.07□□□□□ -1.92
RNU4-60P-201ENST00000517239 STEAP4Q687X5 459 aa3.07□□□□□ -1.92
RNU4-60P-201ENST00000517239 LEMD1Q68G75 181 aa3.07□□□□□ -1.92
RNU4-60P-201ENST00000517239 OR10K2Q6IF99 312 aa3.07□□□□□ -1.92
RNU4-60P-201ENST00000517239 TMEM144Q7Z5S9 345 aa3.07□□□□□ -1.92
RNU4-60P-201ENST00000517239 C4orf32Q8N8J7 132 aa3.07□□□□□ -1.92
RNU4-60P-201ENST00000517239 COX18Q8N8Q8 333 aa3.07□□□□□ -1.92
RNU4-60P-201ENST00000517239 WDSUB1Q8N9V3 476 aa3.07□□□□□ -1.92
RNU4-60P-201ENST00000517239 C11orf72Q8NBR9 251 aa3.07□□□□□ -1.92
RNU4-60P-201ENST00000517239 VN1R17PQ8TDU5 208 aa3.07□□□□□ -1.92
RNU4-60P-201ENST00000517239 CLDN23Q96B33 292 aa3.07□□□□□ -1.92
RNU4-60P-201ENST00000517239 RNF185Q96GF1 192 aa3.07□□□□□ -1.92
RNU4-60P-201ENST00000517239 FCRL1Q96LA6 429 aa3.07□□□□□ -1.92
RNU4-60P-201ENST00000517239 FAM19A4Q96LR4 140 aa3.07□□□□□ -1.92
RNU4-60P-201ENST00000517239 SIGMAR1Q99720 223 aa3.07□□□□□ -1.92
RNU4-60P-201ENST00000517239 MED18Q9BUE0 208 aa3.07□□□□□ -1.92
RNU4-60P-201ENST00000517239 MROQ9BYG7 248 aa3.07□□□□□ -1.92
RNU4-60P-201ENST00000517239 JPT2Q9H910 190 aa3.07□□□□□ -1.92
RNU4-60P-201ENST00000517239 AIG1Q9NVV5 245 aa3.07□□□□□ -1.92
RNU4-60P-201ENST00000517239 DMAC2Q9NW81 257 aa3.07□□□□□ -1.92
RNU4-60P-201ENST00000517239 DHRS4-AS1Q9P1J3 65 aa3.07□□□□□ -1.92
RNU4-60P-201ENST00000517239 HHLA2Q9UM44 414 aa3.07□□□□□ -1.92
RNU4-60P-201ENST00000517239 MYRFQ9Y2G1 1151 aa3.07□□□□□ -1.92
RNU4-60P-201ENST00000517239 NDUFAF1Q9Y375 327 aa3.07□□□□□ -1.92
RNU4-60P-201ENST00000517239 DNMT1P26358 1616 aaKnown RBP3.07□□□□□ -1.92
RNU4-60P-201ENST00000517239 A0A1W2PP64 1363 aa3.06□□□□□ -1.92
RNU4-60P-201ENST00000517239 I3L4J1 428 aa3.06□□□□□ -1.92
RNU4-60P-201ENST00000517239 LAD1O00515 517 aa3.06□□□□□ -1.92
RNU4-60P-201ENST00000517239 CHP2O43745 196 aa3.06□□□□□ -1.92
RNU4-60P-201ENST00000517239 NDUFS5O43920 106 aa3.06□□□□□ -1.92
RNU4-60P-201ENST00000517239 PLIN3O60664 434 aa3.06□□□□□ -1.92
RNU4-60P-201ENST00000517239 NPIPB7O75200 414 aa3.06□□□□□ -1.92
RNU4-60P-201ENST00000517239 DHRS3O75911 302 aa3.06□□□□□ -1.92
RNU4-60P-201ENST00000517239 CPDO75976 1380 aa3.06□□□□□ -1.92
RNU4-60P-201ENST00000517239 MOSP00540 346 aa3.06□□□□□ -1.92
RNU4-60P-201ENST00000517239 ICAM2P13598 275 aa3.06□□□□□ -1.92
RNU4-60P-201ENST00000517239 GABRA1P14867 456 aa3.06□□□□□ -1.92
RNU4-60P-201ENST00000517239 CD1EP15812 388 aa3.06□□□□□ -1.92
RNU4-60P-201ENST00000517239 SPNP16150 400 aa3.06□□□□□ -1.92
RNU4-60P-201ENST00000517239 GNB3P16520 340 aa3.06□□□□□ -1.92
RNU4-60P-201ENST00000517239 TAC1P20366 129 aa3.06□□□□□ -1.92
RNU4-60P-201ENST00000517239 RPL5P46777 297 aaKnown RBP3.06□□□□□ -1.92
RNU4-60P-201ENST00000517239 ACOT2P49753 483 aa3.06□□□□□ -1.92
RNU4-60P-201ENST00000517239 P2RX1P51575 399 aa3.06□□□□□ -1.92
RNU4-60P-201ENST00000517239 FGF8P55075 233 aaPredicted RBP3.06□□□□□ -1.92
RNU4-60P-201ENST00000517239 RAB25P57735 213 aa3.06□□□□□ -1.92
RNU4-60P-201ENST00000517239 TAS2R41P59536 307 aa3.06□□□□□ -1.92
RNU4-60P-201ENST00000517239 TAS2R19P59542 299 aa3.06□□□□□ -1.92
RNU4-60P-201ENST00000517239 NAA20P61599 178 aa3.06□□□□□ -1.92
RNU4-60P-201ENST00000517239 BTN3A2P78410 334 aa3.06□□□□□ -1.92
RNU4-60P-201ENST00000517239 INCA1Q0VD86 236 aa3.06□□□□□ -1.92
RNU4-60P-201ENST00000517239 LAMTOR4Q0VGL1 99 aa3.06□□□□□ -1.92
RNU4-60P-201ENST00000517239 EDDM3AQ14507 147 aa3.06□□□□□ -1.92
RNU4-60P-201ENST00000517239 KIAA0087Q14695 138 aa3.06□□□□□ -1.92
RNU4-60P-201ENST00000517239 SMCO1Q147U7 214 aa3.06□□□□□ -1.92
RNU4-60P-201ENST00000517239 RGNQ15493 299 aa3.06□□□□□ -1.92
RNU4-60P-201ENST00000517239 TGIF1Q15583 401 aa3.06□□□□□ -1.92
RNU4-60P-201ENST00000517239 ARHGAP11BQ3KRB8 267 aa3.06□□□□□ -1.92
RNU4-60P-201ENST00000517239 TMEM97Q5BJF2 176 aa3.06□□□□□ -1.92
RNU4-60P-201ENST00000517239 HIST2H3PS2Q5TEC6 136 aa3.06□□□□□ -1.92
RNU4-60P-201ENST00000517239 ZNF530Q6P9A1 599 aaPredicted RBP3.06□□□□□ -1.92
RNU4-60P-201ENST00000517239 ZNF771Q7L3S4 317 aaPredicted RBP3.06□□□□□ -1.92
RNU4-60P-201ENST00000517239 OLIG3Q7RTU3 272 aa3.06□□□□□ -1.92
RNU4-60P-201ENST00000517239 SLC36A1Q7Z2H8 476 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms