RNA–Protein interactions for RNA: ENST00000516850.1

RNU6-1088P-201, Transcript of RNA, U6 small nuclear 1088, pseudogene, humanhuman

BASIC

Gene RNU6-1088P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1088P-201ENST00000516850 TP53I11O14683 189 aa0.45□□□□□ -2.34
RNU6-1088P-201ENST00000516850 UPK1BO75841 260 aa0.45□□□□□ -2.34
RNU6-1088P-201ENST00000516850 CD160O95971 181 aa0.45□□□□□ -2.34
RNU6-1088P-201ENST00000516850 IGKV1D-33P01593 117 aa0.45□□□□□ -2.34
RNU6-1088P-201ENST00000516850 IGKV1-33P01594 117 aa0.45□□□□□ -2.34
RNU6-1088P-201ENST00000516850 CLTAP09496 248 aa0.45□□□□□ -2.34
RNU6-1088P-201ENST00000516850 ZNF22P17026 224 aaPredicted RBP0.45□□□□□ -2.34
RNU6-1088P-201ENST00000516850 GABRG2P18507 467 aa0.45□□□□□ -2.34
RNU6-1088P-201ENST00000516850 GTF2E2P29084 291 aaKnown RBP0.45□□□□□ -2.34
RNU6-1088P-201ENST00000516850 OR2B8PP59922 312 aa0.45□□□□□ -2.34
RNU6-1088P-201ENST00000516850 ACTR1AP61163 376 aa0.45□□□□□ -2.34
RNU6-1088P-201ENST00000516850 ELOCQ15369 112 aa0.45□□□□□ -2.34
RNU6-1088P-201ENST00000516850 PYCR3Q53H96 274 aa0.45□□□□□ -2.34
RNU6-1088P-201ENST00000516850 SLC30A8Q8IWU4 369 aa0.45□□□□□ -2.34
RNU6-1088P-201ENST00000516850 OR5C1Q8NGR4 320 aa0.45□□□□□ -2.34
RNU6-1088P-201ENST00000516850 ELMO1Q92556 727 aa0.45□□□□□ -2.34
RNU6-1088P-201ENST00000516850 RCN3Q96D15 328 aa0.45□□□□□ -2.34
RNU6-1088P-201ENST00000516850 TSGA13Q96PP4 275 aa0.45□□□□□ -2.34
RNU6-1088P-201ENST00000516850 CCL26Q9Y258 94 aa0.45□□□□□ -2.34
RNU6-1088P-201ENST00000516850 FADS3Q9Y5Q0 445 aa0.45□□□□□ -2.34
RNU6-1088P-201ENST00000516850 UBN2Q6ZU65 1347 aa0.44□□□□□ -2.34
RNU6-1088P-201ENST00000516850 MDC1Q14676 2089 aaKnown RBP0.44□□□□□ -2.34
RNU6-1088P-201ENST00000516850 A0A0J9YYE9 177 aa0.44□□□□□ -2.34
RNU6-1088P-201ENST00000516850 EIF3HO15372 352 aaKnown RBP eCLIP0.44□□□□□ -2.34
RNU6-1088P-201ENST00000516850 TRBC1P01850 177 aa0.44□□□□□ -2.34
RNU6-1088P-201ENST00000516850 FTH1P02794 183 aa0.44□□□□□ -2.34
RNU6-1088P-201ENST00000516850 OPN1SWP03999 348 aa0.44□□□□□ -2.34
RNU6-1088P-201ENST00000516850 GPX1P07203 203 aa0.44□□□□□ -2.34
RNU6-1088P-201ENST00000516850 SERPINB8P50452 374 aa0.44□□□□□ -2.34
RNU6-1088P-201ENST00000516850 SLC18A1P54219 525 aa0.44□□□□□ -2.34
RNU6-1088P-201ENST00000516850 ATP5IP56385 69 aaPredicted RBP0.44□□□□□ -2.34
RNU6-1088P-201ENST00000516850 ZNF33AQ06730 810 aa0.44□□□□□ -2.34
RNU6-1088P-201ENST00000516850 FOXF1Q12946 379 aa0.44□□□□□ -2.34
RNU6-1088P-201ENST00000516850 TAF7Q15545 349 aaPredicted RBP0.44□□□□□ -2.34
RNU6-1088P-201ENST00000516850 TRMT5Q32P41 509 aaKnown RBP0.44□□□□□ -2.34
RNU6-1088P-201ENST00000516850 NOXRED1Q6NXP6 359 aa0.44□□□□□ -2.34
RNU6-1088P-201ENST00000516850 CYHR1Q6ZMK1 362 aa0.44□□□□□ -2.34
RNU6-1088P-201ENST00000516850 RGS9BPQ6ZS82 235 aa0.44□□□□□ -2.34
RNU6-1088P-201ENST00000516850 MUC15Q8N387 334 aa0.44□□□□□ -2.34
RNU6-1088P-201ENST00000516850 TCAIMQ8N3R3 496 aa0.44□□□□□ -2.34
RNU6-1088P-201ENST00000516850 FBXO32Q969P5 355 aa0.44□□□□□ -2.34
RNU6-1088P-201ENST00000516850 SMARCD1Q96GM5 515 aa0.44□□□□□ -2.34
RNU6-1088P-201ENST00000516850 TMEM175Q9BSA9 504 aa0.44□□□□□ -2.34
RNU6-1088P-201ENST00000516850 PORCNQ9H237 461 aa0.44□□□□□ -2.34
RNU6-1088P-201ENST00000516850 TAC3Q9UHF0 121 aa0.44□□□□□ -2.34
RNU6-1088P-201ENST00000516850 SAR1BQ9Y6B6 198 aa0.44□□□□□ -2.34
RNU6-1088P-201ENST00000516850 CACNA1SQ13698 1873 aa0.44□□□□□ -2.34
RNU6-1088P-201ENST00000516850 NYNRINQ9P2P1 1898 aaKnown RBP0.44□□□□□ -2.34
RNU6-1088P-201ENST00000516850 ADGRB3O60242 1522 aa0.43□□□□□ -2.34
RNU6-1088P-201ENST00000516850 A0A1W2PQL4 384 aaPredicted RBP0.43□□□□□ -2.34
RNU6-1088P-201ENST00000516850 A8MWP4 228 aa0.43□□□□□ -2.34
RNU6-1088P-201ENST00000516850 H3BMM0 161 aa0.43□□□□□ -2.34
RNU6-1088P-201ENST00000516850 CGB7P0DN87 165 aa0.43□□□□□ -2.34
RNU6-1088P-201ENST00000516850 PSMB2P49721 201 aa0.43□□□□□ -2.34
RNU6-1088P-201ENST00000516850 DOC2AQ14183 400 aa0.43□□□□□ -2.34
RNU6-1088P-201ENST00000516850 ITIH4Q14624 930 aa0.43□□□□□ -2.34
RNU6-1088P-201ENST00000516850 BCL2A1Q16548 175 aa0.43□□□□□ -2.34
RNU6-1088P-201ENST00000516850 SPIN4Q56A73 249 aa0.43□□□□□ -2.34
RNU6-1088P-201ENST00000516850 TTMPQ5BVD1 217 aa0.43□□□□□ -2.34
RNU6-1088P-201ENST00000516850 MLIPQ5VWP3 458 aa0.43□□□□□ -2.34
RNU6-1088P-201ENST00000516850 CASC1Q6TDU7 716 aa0.43□□□□□ -2.34
RNU6-1088P-201ENST00000516850 FAM231DQ6ZW35 169 aa0.43□□□□□ -2.34
RNU6-1088P-201ENST00000516850 ZFP82Q8N141 532 aa0.43□□□□□ -2.34
RNU6-1088P-201ENST00000516850 DCANP1Q8TF63 244 aa0.43□□□□□ -2.34
RNU6-1088P-201ENST00000516850 UBE2WQ96B02 151 aa0.43□□□□□ -2.34
RNU6-1088P-201ENST00000516850 C20orf24Q9BUV8 137 aa0.43□□□□□ -2.34
RNU6-1088P-201ENST00000516850 MRPL20Q9BYC9 149 aaKnown RBP0.43□□□□□ -2.34
RNU6-1088P-201ENST00000516850 SLC19A3Q9BZV2 496 aa0.43□□□□□ -2.34
RNU6-1088P-201ENST00000516850 UCK2Q9BZX2 261 aa0.43□□□□□ -2.34
RNU6-1088P-201ENST00000516850 STMN4Q9H169 189 aaPredicted RBP0.43□□□□□ -2.34
RNU6-1088P-201ENST00000516850 TMEM100Q9NV29 134 aa0.43□□□□□ -2.34
RNU6-1088P-201ENST00000516850 PTTG3PQ9NZH4 202 aa0.43□□□□□ -2.34
RNU6-1088P-201ENST00000516850 RCL1Q9Y2P8 373 aaKnown RBP0.43□□□□□ -2.34
RNU6-1088P-201ENST00000516850 PPIL1Q9Y3C6 166 aa0.43□□□□□ -2.34
RNU6-1088P-201ENST00000516850 HSPE1-MOB4S4R3N1 261 aa0.43□□□□□ -2.34
RNU6-1088P-201ENST00000516850 ZNF469Q96JG9 3925 aaPredicted RBP0.43□□□□□ -2.34
RNU6-1088P-201ENST00000516850 SHANK3Q9BYB0 1731 aa0.43□□□□□ -2.34
RNU6-1088P-201ENST00000516850 TMEM131Q92545 1883 aa0.43□□□□□ -2.34
RNU6-1088P-201ENST00000516850 NCKAP5O14513 1909 aa0.42□□□□□ -2.34
RNU6-1088P-201ENST00000516850 TRAV8-6A0A0B4J262 113 aa0.42□□□□□ -2.34
RNU6-1088P-201ENST00000516850 LINC01619G3V211 115 aa0.42□□□□□ -2.34
RNU6-1088P-201ENST00000516850 CXCL11O14625 94 aa0.42□□□□□ -2.34
RNU6-1088P-201ENST00000516850 ERI3O43414 337 aaKnown RBP0.42□□□□□ -2.34
RNU6-1088P-201ENST00000516850 NAPSAO96009 420 aa0.42□□□□□ -2.34
RNU6-1088P-201ENST00000516850 BLVRBP30043 206 aaPredicted RBP0.42□□□□□ -2.34
RNU6-1088P-201ENST00000516850 MTPNP58546 118 aa0.42□□□□□ -2.34
RNU6-1088P-201ENST00000516850 HSDL1Q3SXM5 330 aa0.42□□□□□ -2.34
RNU6-1088P-201ENST00000516850 FBXL19-AS1Q494R0 122 aa0.42□□□□□ -2.34
RNU6-1088P-201ENST00000516850 SELENOHQ8IZQ5 122 aaKnown RBP0.42□□□□□ -2.34
RNU6-1088P-201ENST00000516850 JAGN1Q8N5M9 183 aa0.42□□□□□ -2.34
RNU6-1088P-201ENST00000516850 OR13C2Q8NGS9 318 aa0.42□□□□□ -2.34
RNU6-1088P-201ENST00000516850 FAM19A4Q96LR4 140 aa0.42□□□□□ -2.34
RNU6-1088P-201ENST00000516850 GSDMAQ96QA5 445 aa0.42□□□□□ -2.34
RNU6-1088P-201ENST00000516850 B9D2Q9BPU9 175 aa0.42□□□□□ -2.34
RNU6-1088P-201ENST00000516850 MRPL32Q9BYC8 188 aaKnown RBP0.42□□□□□ -2.34
RNU6-1088P-201ENST00000516850 SLC7A5P2Q9GIP4 190 aa0.42□□□□□ -2.34
RNU6-1088P-201ENST00000516850 ZNF160Q9HCG1 818 aa0.42□□□□□ -2.34
RNU6-1088P-201ENST00000516850 PXMP2Q9NR77 195 aa0.42□□□□□ -2.34
RNU6-1088P-201ENST00000516850 BLOC1S6Q9UL45 172 aa0.42□□□□□ -2.34
RNU6-1088P-201ENST00000516850 U3KQK5 164 aa0.42□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms