RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 SLC25A30Q5SVS4 291 aa9.48□□□□□ -0.89
VCAN-212ENST00000515397 ATPAF1Q5TC12 328 aaPredicted RBP9.48□□□□□ -0.89
VCAN-212ENST00000515397 METTL11BQ5VVY1 283 aa9.48□□□□□ -0.89
VCAN-212ENST00000515397 MEDAGQ5VYS4 303 aa9.48□□□□□ -0.89
VCAN-212ENST00000515397 ACP7Q6ZNF0 438 aa9.48□□□□□ -0.89
VCAN-212ENST00000515397 ZNF788Q6ZQV5 615 aa9.48□□□□□ -0.89
VCAN-212ENST00000515397 RNF144BQ7Z419 303 aa9.48□□□□□ -0.89
VCAN-212ENST00000515397 FAM220AQ7Z4H9 259 aa9.48□□□□□ -0.89
VCAN-212ENST00000515397 CALHM1Q8IU99 346 aa9.48□□□□□ -0.89
VCAN-212ENST00000515397 ACBD7Q8N6N7 88 aa9.48□□□□□ -0.89
VCAN-212ENST00000515397 CD177Q8N6Q3 437 aa9.48□□□□□ -0.89
VCAN-212ENST00000515397 PNLDC1Q8NA58 520 aaKnown RBP9.48□□□□□ -0.89
VCAN-212ENST00000515397 TMEM185AQ8NFB2 350 aa9.48□□□□□ -0.89
VCAN-212ENST00000515397 OR51A4Q8NGJ6 313 aa9.48□□□□□ -0.89
VCAN-212ENST00000515397 APH1BQ8WW43 257 aa9.48□□□□□ -0.89
VCAN-212ENST00000515397 STMN2Q93045 179 aa9.48□□□□□ -0.89
VCAN-212ENST00000515397 FGGYQ96C11 551 aa9.48□□□□□ -0.89
VCAN-212ENST00000515397 ADAT3Q96EY9 351 aaPredicted RBP9.48□□□□□ -0.89
VCAN-212ENST00000515397 C4orf36Q96KX1 117 aa9.48□□□□□ -0.89
VCAN-212ENST00000515397 SIRPDQ9H106 197 aa9.48□□□□□ -0.89
VCAN-212ENST00000515397 SIRT7Q9NRC8 400 aa9.48□□□□□ -0.89
VCAN-212ENST00000515397 SLC25A10Q9UBX3 287 aaPredicted RBP9.48□□□□□ -0.89
VCAN-212ENST00000515397 OR14J1Q9UGF5 321 aa9.48□□□□□ -0.89
VCAN-212ENST00000515397 EXOGQ9Y2C4 368 aaKnown RBP9.48□□□□□ -0.89
VCAN-212ENST00000515397 MAB21L2Q9Y586 359 aa9.48□□□□□ -0.89
VCAN-212ENST00000515397 NBEAL1Q6ZS30 2694 aa9.48□□□□□ -0.89
VCAN-212ENST00000515397 MEX3AA1L020 520 aaKnown RBP9.47□□□□□ -0.89
VCAN-212ENST00000515397 ANKRD61A6NGH8 418 aa9.47□□□□□ -0.89
VCAN-212ENST00000515397 NKX6-3A6NJ46 265 aa9.47□□□□□ -0.89
VCAN-212ENST00000515397 SIGLEC5O15389 551 aa9.47□□□□□ -0.89
VCAN-212ENST00000515397 ACAA1P09110 424 aaPredicted RBP9.47□□□□□ -0.89
VCAN-212ENST00000515397 DBTP11182 482 aaKnown RBP9.47□□□□□ -0.89
VCAN-212ENST00000515397 CAPZA1P52907 286 aa9.47□□□□□ -0.89
VCAN-212ENST00000515397 ERVFRD-1P60508 538 aa9.47□□□□□ -0.89
VCAN-212ENST00000515397 IL13RA1P78552 427 aa9.47□□□□□ -0.89
VCAN-212ENST00000515397 KLRD1Q13241 179 aa9.47□□□□□ -0.89
VCAN-212ENST00000515397 SLC9A3R2Q15599 337 aa9.47□□□□□ -0.89
VCAN-212ENST00000515397 CDONQ4KMG0 1287 aa9.47□□□□□ -0.89
VCAN-212ENST00000515397 ZBTB37Q5TC79 503 aa9.47□□□□□ -0.89
VCAN-212ENST00000515397 GPR157Q5UAW9 335 aa9.47□□□□□ -0.89
VCAN-212ENST00000515397 C12orf54Q6X4T0 127 aa9.47□□□□□ -0.89
VCAN-212ENST00000515397 VMO1Q7Z5L0 202 aa9.47□□□□□ -0.89
VCAN-212ENST00000515397 ZNF573Q86YE8 665 aa9.47□□□□□ -0.89
VCAN-212ENST00000515397 PNKDQ8N490 385 aa9.47□□□□□ -0.89
VCAN-212ENST00000515397 LY6G5BQ8NDX9 201 aa9.47□□□□□ -0.89
VCAN-212ENST00000515397 OR4M1Q8NGD0 313 aa9.47□□□□□ -0.89
VCAN-212ENST00000515397 OR52I1Q8NGK6 324 aa9.47□□□□□ -0.89
VCAN-212ENST00000515397 FAM216AQ8WUB2 273 aa9.47□□□□□ -0.89
VCAN-212ENST00000515397 CYGBQ8WWM9 190 aa9.47□□□□□ -0.89
VCAN-212ENST00000515397 ZDHHC16Q969W1 377 aa9.47□□□□□ -0.89
VCAN-212ENST00000515397 SLAMF9Q96A28 289 aa9.47□□□□□ -0.89
VCAN-212ENST00000515397 C12orf43Q96C57 262 aaKnown RBP9.47□□□□□ -0.89
VCAN-212ENST00000515397 PELI1Q96FA3 418 aa9.47□□□□□ -0.89
VCAN-212ENST00000515397 JMJD8Q96S16 334 aa9.47□□□□□ -0.89
VCAN-212ENST00000515397 DCTN5Q9BTE1 182 aa9.47□□□□□ -0.89
VCAN-212ENST00000515397 PLEKHA1Q9HB21 404 aa9.47□□□□□ -0.89
VCAN-212ENST00000515397 ZNF222Q9UK12 451 aa9.47□□□□□ -0.89
VCAN-212ENST00000515397 J3QT63 122 aa9.46□□□□□ -0.9
VCAN-212ENST00000515397 HOXA3O43365 443 aaPredicted RBP9.46□□□□□ -0.9
VCAN-212ENST00000515397 NXPH2O95156 264 aa9.46□□□□□ -0.9
VCAN-212ENST00000515397 ECDO95905 644 aaPredicted RBP9.46□□□□□ -0.9
VCAN-212ENST00000515397 LIPFP07098 398 aa9.46□□□□□ -0.9
VCAN-212ENST00000515397 HTR1AP08908 422 aa9.46□□□□□ -0.9
VCAN-212ENST00000515397 PGA5P0DJD9 388 aa9.46□□□□□ -0.9
VCAN-212ENST00000515397 PRTN3P24158 256 aa9.46□□□□□ -0.9
VCAN-212ENST00000515397 PRDX2P32119 198 aa9.46□□□□□ -0.9
VCAN-212ENST00000515397 RCN1Q15293 331 aa9.46□□□□□ -0.9
VCAN-212ENST00000515397 TUSC1Q2TAM9 212 aa9.46□□□□□ -0.9
VCAN-212ENST00000515397 Q6ZSR3 168 aa9.46□□□□□ -0.9
VCAN-212ENST00000515397 Q8N7P7 452 aa9.46□□□□□ -0.9
VCAN-212ENST00000515397 POC1AQ8NBT0 407 aa9.46□□□□□ -0.9
VCAN-212ENST00000515397 ZNF555Q8NEP9 628 aa9.46□□□□□ -0.9
VCAN-212ENST00000515397 CNIH3Q8TBE1 160 aa9.46□□□□□ -0.9
VCAN-212ENST00000515397 RFT1Q96AA3 541 aa9.46□□□□□ -0.9
VCAN-212ENST00000515397 MED30Q96HR3 178 aa9.46□□□□□ -0.9
VCAN-212ENST00000515397 SPACA5Q96QH8 159 aa9.46□□□□□ -0.9
VCAN-212ENST00000515397 ZNF649Q9BS31 505 aa9.46□□□□□ -0.9
VCAN-212ENST00000515397 ALG8Q9BVK2 526 aa9.46□□□□□ -0.9
VCAN-212ENST00000515397 SMPD3Q9NY59 655 aaPredicted RBP9.46□□□□□ -0.9
VCAN-212ENST00000515397 SLC7A11Q9UPY5 501 aa9.46□□□□□ -0.9
VCAN-212ENST00000515397 ANK2Q01484 3957 aa9.46□□□□□ -0.9
VCAN-212ENST00000515397 IGHV1-69DA0A0B4J2H0 117 aa9.45□□□□□ -0.9
VCAN-212ENST00000515397 IGKV1-9A0A0C4DH69 117 aa9.45□□□□□ -0.9
VCAN-212ENST00000515397 A0A1W2PQ09 198 aa9.45□□□□□ -0.9
VCAN-212ENST00000515397 HAX1O00165 279 aa9.45□□□□□ -0.9
VCAN-212ENST00000515397 WBP4O75554 376 aaKnown RBP9.45□□□□□ -0.9
VCAN-212ENST00000515397 IGHV1-69P01742 117 aa9.45□□□□□ -0.9
VCAN-212ENST00000515397 OMGP23515 440 aa9.45□□□□□ -0.9
VCAN-212ENST00000515397 PEX2P28328 305 aa9.45□□□□□ -0.9
VCAN-212ENST00000515397 DUSP1P28562 367 aa9.45□□□□□ -0.9
VCAN-212ENST00000515397 POU3F4P49335 361 aa9.45□□□□□ -0.9
VCAN-212ENST00000515397 GTF2A1P52655 376 aaPredicted RBP9.45□□□□□ -0.9
VCAN-212ENST00000515397 SNU13P55769 128 aaKnown RBP9.45□□□□□ -0.9
VCAN-212ENST00000515397 ACTC1P68032 377 aa9.45□□□□□ -0.9
VCAN-212ENST00000515397 ACTA1P68133 377 aa9.45□□□□□ -0.9
VCAN-212ENST00000515397 GALEQ14376 348 aa9.45□□□□□ -0.9
VCAN-212ENST00000515397 ZSCAN26Q16670 478 aa9.45□□□□□ -0.9
VCAN-212ENST00000515397 SLC25A26Q70HW3 274 aa9.45□□□□□ -0.9
VCAN-212ENST00000515397 FAM185AQ8N0U4 392 aa9.45□□□□□ -0.9
VCAN-212ENST00000515397 PIP4P2Q8N4L2 257 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms