RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 CYB5AP00167 134 aa17.69■□□□□ 0.42
LSM6-207ENST00000515311 IRF2P14316 349 aa17.69■□□□□ 0.42
LSM6-207ENST00000515311 CFPP27918 469 aa17.69■□□□□ 0.42
LSM6-207ENST00000515311 VBP1P61758 197 aa17.69■□□□□ 0.42
LSM6-207ENST00000515311 RIN1Q13671 783 aa17.69■□□□□ 0.42
LSM6-207ENST00000515311 C1orf100Q5SVJ3 147 aa17.69■□□□□ 0.42
LSM6-207ENST00000515311 ZNF826PQ6ZT77 177 aa17.69■□□□□ 0.42
LSM6-207ENST00000515311 SLC25A26Q70HW3 274 aa17.69■□□□□ 0.42
LSM6-207ENST00000515311 MKXQ8IYA7 352 aa17.69■□□□□ 0.42
LSM6-207ENST00000515311 ZNF671Q8TAW3 534 aa17.69■□□□□ 0.42
LSM6-207ENST00000515311 CCL17Q92583 94 aa17.69■□□□□ 0.42
LSM6-207ENST00000515311 YIPF5Q969M3 257 aa17.69■□□□□ 0.42
LSM6-207ENST00000515311 RBM38Q9H0Z9 239 aaKnown RBP17.69■□□□□ 0.42
LSM6-207ENST00000515311 TMEM106BQ9NUM4 274 aa17.69■□□□□ 0.42
LSM6-207ENST00000515311 RNF7Q9UBF6 113 aa17.69■□□□□ 0.42
LSM6-207ENST00000515311 CACNG2Q9Y698 323 aa17.69■□□□□ 0.42
LSM6-207ENST00000515311 V9GY05 133 aa17.69■□□□□ 0.42
LSM6-207ENST00000515311 CSMD2Q7Z408 3487 aa17.68■□□□□ 0.42
LSM6-207ENST00000515311 SMIM31A0A1B0GVY4 71 aa17.68■□□□□ 0.42
LSM6-207ENST00000515311 hCG_1807616A0A1W2PRN6 198 aa17.68■□□□□ 0.42
LSM6-207ENST00000515311 SYNGR1O43759 233 aa17.68■□□□□ 0.42
LSM6-207ENST00000515311 NOS1APO75052 506 aaPredicted RBP17.68■□□□□ 0.42
LSM6-207ENST00000515311 IL1AP01583 271 aa17.68■□□□□ 0.42
LSM6-207ENST00000515311 COL8A2P25067 703 aa17.68■□□□□ 0.42
LSM6-207ENST00000515311 PTGFRP43088 359 aa17.68■□□□□ 0.42
LSM6-207ENST00000515311 POU3F4P49335 361 aa17.68■□□□□ 0.42
LSM6-207ENST00000515311 TGIF2LYQ8IUE0 185 aa17.68■□□□□ 0.42
LSM6-207ENST00000515311 C1orf87Q8N0U7 546 aa17.68■□□□□ 0.42
LSM6-207ENST00000515311 OR5D18Q8NGL1 313 aa17.68■□□□□ 0.42
LSM6-207ENST00000515311 TNFAIP8L1Q8WVP5 186 aa17.68■□□□□ 0.42
LSM6-207ENST00000515311 ISOC1Q96CN7 298 aa17.68■□□□□ 0.42
LSM6-207ENST00000515311 CNTD2Q9H8S5 307 aa17.68■□□□□ 0.42
LSM6-207ENST00000515311 CHODLQ9H9P2 273 aa17.68■□□□□ 0.42
LSM6-207ENST00000515311 NDUFA13Q9P0J0 144 aa17.68■□□□□ 0.42
LSM6-207ENST00000515311 TMEM178BH3BS89 294 aa17.67■□□□□ 0.42
LSM6-207ENST00000515311 SLC17A2O00624 439 aa17.67■□□□□ 0.42
LSM6-207ENST00000515311 SLC22A1O15245 554 aa17.67■□□□□ 0.42
LSM6-207ENST00000515311 SSX4O60224 188 aa17.67■□□□□ 0.42
LSM6-207ENST00000515311 RHBDL1O75783 438 aa17.67■□□□□ 0.42
LSM6-207ENST00000515311 CDRT1O95170 752 aa17.67■□□□□ 0.42
LSM6-207ENST00000515311 PLATP00750 562 aa17.67■□□□□ 0.42
LSM6-207ENST00000515311 LHBP01229 141 aa17.67■□□□□ 0.42
LSM6-207ENST00000515311 CSF3P09919 207 aa17.67■□□□□ 0.42
LSM6-207ENST00000515311 PGA5P0DJD9 388 aa17.67■□□□□ 0.42
LSM6-207ENST00000515311 TMEM225BP0DP42 221 aa17.67■□□□□ 0.42
LSM6-207ENST00000515311 TGFBR1P36897 503 aa17.67■□□□□ 0.42
LSM6-207ENST00000515311 OR3A4PP47883 348 aa17.67■□□□□ 0.42
LSM6-207ENST00000515311 ASCL4Q6XD76 172 aa17.67■□□□□ 0.42
LSM6-207ENST00000515311 USP43Q70EL4 1123 aa17.67■□□□□ 0.42
LSM6-207ENST00000515311 NR2C2APQ86WQ0 139 aa17.67■□□□□ 0.42
LSM6-207ENST00000515311 POC1AQ8NBT0 407 aa17.67■□□□□ 0.42
LSM6-207ENST00000515311 PXT1Q8NFP0 134 aa17.67■□□□□ 0.42
LSM6-207ENST00000515311 OR6M1Q8NGM8 313 aa17.67■□□□□ 0.42
LSM6-207ENST00000515311 OR51F2Q8NH61 342 aa17.67■□□□□ 0.42
LSM6-207ENST00000515311 LRRC29Q8WV35 223 aa17.67■□□□□ 0.42
LSM6-207ENST00000515311 NRIP2Q9BQI9 281 aa17.67■□□□□ 0.42
LSM6-207ENST00000515311 RHOFQ9HBH0 211 aa17.67■□□□□ 0.42
LSM6-207ENST00000515311 TREM2Q9NZC2 230 aa17.67■□□□□ 0.42
LSM6-207ENST00000515311 NPTNQ9Y639 398 aa17.67■□□□□ 0.42
LSM6-207ENST00000515311 A0A0G2JK05 382 aa17.66■□□□□ 0.42
LSM6-207ENST00000515311 NOTOA8MTQ0 251 aa17.66■□□□□ 0.42
LSM6-207ENST00000515311 SRRM5B3KS81 715 aa17.66■□□□□ 0.42
LSM6-207ENST00000515311 LYNX1G3V0Z9 82 aa17.66■□□□□ 0.42
LSM6-207ENST00000515311 ZNF701M0R085 212 aaPredicted RBP17.66■□□□□ 0.42
LSM6-207ENST00000515311 SPRY1O43609 319 aaPredicted RBP17.66■□□□□ 0.42
LSM6-207ENST00000515311 LYNX1P0DP58 116 aa17.66■□□□□ 0.42
LSM6-207ENST00000515311 RANBP1P43487 201 aa17.66■□□□□ 0.42
LSM6-207ENST00000515311 OR10A3P58181 314 aa17.66■□□□□ 0.42
LSM6-207ENST00000515311 MXD1Q05195 221 aa17.66■□□□□ 0.42
LSM6-207ENST00000515311 FAM166AQ6J272 317 aa17.66■□□□□ 0.42
LSM6-207ENST00000515311 Q8IYB0 196 aa17.66■□□□□ 0.42
LSM6-207ENST00000515311 ZNF525Q8N782 197 aa17.66■□□□□ 0.42
LSM6-207ENST00000515311 OR4D6Q8NGJ1 314 aa17.66■□□□□ 0.42
LSM6-207ENST00000515311 CEP19Q96LK0 163 aa17.66■□□□□ 0.42
LSM6-207ENST00000515311 NKX3-1Q99801 234 aaPredicted RBP17.66■□□□□ 0.42
LSM6-207ENST00000515311 FAM192AQ9GZU8 254 aa17.66■□□□□ 0.42
LSM6-207ENST00000515311 PLGRKTQ9HBL7 147 aa17.66■□□□□ 0.42
LSM6-207ENST00000515311 MTCH1Q9NZJ7 389 aa17.66■□□□□ 0.42
LSM6-207ENST00000515311 MRPS28Q9Y2Q9 187 aaKnown RBP17.66■□□□□ 0.42
LSM6-207ENST00000515311 DPPA5A6NC42 116 aa17.65■□□□□ 0.42
LSM6-207ENST00000515311 IFITM5A6NNB3 132 aa17.65■□□□□ 0.42
LSM6-207ENST00000515311 CLDN25C9JDP6 229 aa17.65■□□□□ 0.42
LSM6-207ENST00000515311 H3BMQ9 156 aa17.65■□□□□ 0.42
LSM6-207ENST00000515311 AIPO00170 330 aa17.65■□□□□ 0.42
LSM6-207ENST00000515311 FSTL3O95633 263 aa17.65■□□□□ 0.42
LSM6-207ENST00000515311 CYB5R3P00387 301 aaPredicted RBP17.65■□□□□ 0.42
LSM6-207ENST00000515311 GIFP27352 417 aa17.65■□□□□ 0.42
LSM6-207ENST00000515311 HTR2CP28335 458 aa17.65■□□□□ 0.42
LSM6-207ENST00000515311 SERPINB10P48595 397 aa17.65■□□□□ 0.42
LSM6-207ENST00000515311 PDLIM4P50479 330 aa17.65■□□□□ 0.42
LSM6-207ENST00000515311 TMEM33P57088 247 aa17.65■□□□□ 0.42
LSM6-207ENST00000515311 DSCR9P59020 149 aa17.65■□□□□ 0.42
LSM6-207ENST00000515311 ERVK11-1P61568 191 aa17.65■□□□□ 0.42
LSM6-207ENST00000515311 GCSAMQ8N6F7 178 aa17.65■□□□□ 0.42
LSM6-207ENST00000515311 TBC1D15Q8TC07 691 aa17.65■□□□□ 0.42
LSM6-207ENST00000515311 SLAMF9Q96A28 289 aa17.65■□□□□ 0.42
LSM6-207ENST00000515311 SMURF1Q9HCE7 757 aa17.65■□□□□ 0.42
LSM6-207ENST00000515311 DCAF16Q9NXF7 216 aa17.65■□□□□ 0.42
LSM6-207ENST00000515311 RASL12Q9NYN1 266 aa17.65■□□□□ 0.42
LSM6-207ENST00000515311 IL36GQ9NZH8 169 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms