RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 FLRT3Q9NZU0 649 aa6.62□□□□□ -1.35
PDLIM5-219ENST00000514743 PILRBQ9UKJ0 227 aa6.62□□□□□ -1.35
PDLIM5-219ENST00000514743 AMDHD2Q9Y303 409 aa6.62□□□□□ -1.35
PDLIM5-219ENST00000514743 TIMM10BQ9Y5J6 103 aa6.62□□□□□ -1.35
PDLIM5-219ENST00000514743 SIRT4Q9Y6E7 314 aaPredicted RBP6.62□□□□□ -1.35
PDLIM5-219ENST00000514743 ADAMTS20P59510 1910 aa6.62□□□□□ -1.35
PDLIM5-219ENST00000514743 TNRC18O15417 2968 aaPredicted RBP6.62□□□□□ -1.35
PDLIM5-219ENST00000514743 SPTY2D1-AS1A0A0U1RR47 76 aa6.62□□□□□ -1.35
PDLIM5-219ENST00000514743 IDSB3KWA1 339 aa6.62□□□□□ -1.35
PDLIM5-219ENST00000514743 F5H0A9 414 aaPredicted RBP6.62□□□□□ -1.35
PDLIM5-219ENST00000514743 F5H5P2 479 aa6.62□□□□□ -1.35
PDLIM5-219ENST00000514743 ARPC3O15145 178 aa6.62□□□□□ -1.35
PDLIM5-219ENST00000514743 ADAM20O43506 726 aa6.62□□□□□ -1.35
PDLIM5-219ENST00000514743 SCGB2A1O75556 95 aa6.62□□□□□ -1.35
PDLIM5-219ENST00000514743 TNFP01375 233 aa6.62□□□□□ -1.35
PDLIM5-219ENST00000514743 IGLV3-19P01714 112 aa6.62□□□□□ -1.35
PDLIM5-219ENST00000514743 OR8U9P0C7N5 309 aa6.62□□□□□ -1.35
PDLIM5-219ENST00000514743 OMGP23515 440 aa6.62□□□□□ -1.35
PDLIM5-219ENST00000514743 DPP4P27487 766 aa6.62□□□□□ -1.35
PDLIM5-219ENST00000514743 EMDP50402 254 aa6.62□□□□□ -1.35
PDLIM5-219ENST00000514743 MMP16P51512 607 aa6.62□□□□□ -1.35
PDLIM5-219ENST00000514743 SLC16A1P53985 500 aa6.62□□□□□ -1.35
PDLIM5-219ENST00000514743 RAB38P57729 211 aa6.62□□□□□ -1.35
PDLIM5-219ENST00000514743 AESQ08117 197 aa6.62□□□□□ -1.35
PDLIM5-219ENST00000514743 FAM53BQ14153 422 aa6.62□□□□□ -1.35
PDLIM5-219ENST00000514743 FZD2Q14332 565 aa6.62□□□□□ -1.35
PDLIM5-219ENST00000514743 DEFB110Q30KQ9 67 aa6.62□□□□□ -1.35
PDLIM5-219ENST00000514743 DNM1P34Q6PK57 102 aa6.62□□□□□ -1.35
PDLIM5-219ENST00000514743 ZNF322Q6U7Q0 402 aaPredicted RBP6.62□□□□□ -1.35
PDLIM5-219ENST00000514743 TMEM182Q6ZP80 229 aaPredicted RBP6.62□□□□□ -1.35
PDLIM5-219ENST00000514743 NR2C2APQ86WQ0 139 aa6.62□□□□□ -1.35
PDLIM5-219ENST00000514743 SIAH3Q8IW03 269 aa6.62□□□□□ -1.35
PDLIM5-219ENST00000514743 IZUMO1Q8IYV9 350 aa6.62□□□□□ -1.35
PDLIM5-219ENST00000514743 METTL27Q8N6F8 245 aaPredicted RBP6.62□□□□□ -1.35
PDLIM5-219ENST00000514743 ZSCAN4Q8NAM6 433 aaPredicted RBP6.62□□□□□ -1.35
PDLIM5-219ENST00000514743 SMRP1Q8NCR6 262 aa6.62□□□□□ -1.35
PDLIM5-219ENST00000514743 OR51G2Q8NGK0 314 aa6.62□□□□□ -1.35
PDLIM5-219ENST00000514743 SNX22Q96L94 193 aa6.62□□□□□ -1.35
PDLIM5-219ENST00000514743 FER1L6-AS2Q96M78 137 aa6.62□□□□□ -1.35
PDLIM5-219ENST00000514743 METRNQ9UJH8 293 aa6.62□□□□□ -1.35
PDLIM5-219ENST00000514743 RCE1Q9Y256 329 aa6.62□□□□□ -1.35
PDLIM5-219ENST00000514743 SIGLEC7Q9Y286 467 aa6.62□□□□□ -1.35
PDLIM5-219ENST00000514743 STRAPQ9Y3F4 350 aaKnown RBP6.62□□□□□ -1.35
PDLIM5-219ENST00000514743 COX11Q9Y6N1 276 aa6.62□□□□□ -1.35
PDLIM5-219ENST00000514743 MPDZO75970 2070 aa6.62□□□□□ -1.35
PDLIM5-219ENST00000514743 A0A0B4J2E0 115 aa6.61□□□□□ -1.35
PDLIM5-219ENST00000514743 A0A1B0GX12 115 aa6.61□□□□□ -1.35
PDLIM5-219ENST00000514743 GGT3PA6NGU5 568 aa6.61□□□□□ -1.35
PDLIM5-219ENST00000514743 ZNF814B7Z6K7 855 aa6.61□□□□□ -1.35
PDLIM5-219ENST00000514743 GABRPO00591 440 aa6.61□□□□□ -1.35
PDLIM5-219ENST00000514743 TRGC1P0CF51 173 aa6.61□□□□□ -1.35
PDLIM5-219ENST00000514743 RFX3P48380 749 aa6.61□□□□□ -1.35
PDLIM5-219ENST00000514743 ASCL1P50553 236 aa6.61□□□□□ -1.35
PDLIM5-219ENST00000514743 OR12D2P58182 307 aa6.61□□□□□ -1.35
PDLIM5-219ENST00000514743 RHEBQ15382 184 aa6.61□□□□□ -1.35
PDLIM5-219ENST00000514743 RAB30Q15771 203 aa6.61□□□□□ -1.35
PDLIM5-219ENST00000514743 FAM27D1Q5T7N8 215 aa6.61□□□□□ -1.35
PDLIM5-219ENST00000514743 OVCH1Q7RTY7 1134 aa6.61□□□□□ -1.35
PDLIM5-219ENST00000514743 COMMD2Q86X83 199 aa6.61□□□□□ -1.35
PDLIM5-219ENST00000514743 OR2C3Q8N628 320 aa6.61□□□□□ -1.35
PDLIM5-219ENST00000514743 TMEM99Q8N816 258 aa6.61□□□□□ -1.35
PDLIM5-219ENST00000514743 OR4N2Q8NGD1 307 aa6.61□□□□□ -1.35
PDLIM5-219ENST00000514743 OR52R1Q8NGF1 315 aa6.61□□□□□ -1.35
PDLIM5-219ENST00000514743 OR1N2Q8NGR9 330 aa6.61□□□□□ -1.35
PDLIM5-219ENST00000514743 OR9A4Q8NGU2 314 aa6.61□□□□□ -1.35
PDLIM5-219ENST00000514743 HMGB4Q8WW32 186 aa6.61□□□□□ -1.35
PDLIM5-219ENST00000514743 LOXL4Q96JB6 756 aa6.61□□□□□ -1.35
PDLIM5-219ENST00000514743 ATF6BQ99941 703 aa6.61□□□□□ -1.35
PDLIM5-219ENST00000514743 LMF2Q9BU23 707 aaKnown RBP6.61□□□□□ -1.35
PDLIM5-219ENST00000514743 PHF7Q9BWX1 381 aaPredicted RBP6.61□□□□□ -1.35
PDLIM5-219ENST00000514743 CNTD2Q9H8S5 307 aa6.61□□□□□ -1.35
PDLIM5-219ENST00000514743 POLR3KQ9Y2Y1 108 aaPredicted RBP6.61□□□□□ -1.35
PDLIM5-219ENST00000514743 GON4LQ3T8J9 2241 aa6.61□□□□□ -1.35
PDLIM5-219ENST00000514743 SPTBP11277 2137 aa6.61□□□□□ -1.35
PDLIM5-219ENST00000514743 PPIAL4EA0A075B759 164 aa6.61□□□□□ -1.35
PDLIM5-219ENST00000514743 PPIAL4CA0A0B4J2A2 164 aa6.61□□□□□ -1.35
PDLIM5-219ENST00000514743 KIR2DS5A0A0G2JLQ3 304 aa6.61□□□□□ -1.35
PDLIM5-219ENST00000514743 A0A0G2JNG1 304 aa6.61□□□□□ -1.35
PDLIM5-219ENST00000514743 RNF212BA8MTL3 300 aa6.61□□□□□ -1.35
PDLIM5-219ENST00000514743 PPIAL4DF5H284 164 aa6.61□□□□□ -1.35
PDLIM5-219ENST00000514743 KIR2DS3K7RE56 304 aa6.61□□□□□ -1.35
PDLIM5-219ENST00000514743 MFNGO00587 321 aa6.61□□□□□ -1.35
PDLIM5-219ENST00000514743 BCL2L11O43521 198 aa6.61□□□□□ -1.35
PDLIM5-219ENST00000514743 PPIAL4FP0DN26 164 aa6.61□□□□□ -1.35
PDLIM5-219ENST00000514743 PSG1P11464 419 aa6.61□□□□□ -1.35
PDLIM5-219ENST00000514743 GABRA3P34903 492 aa6.61□□□□□ -1.35
PDLIM5-219ENST00000514743 TIMP3P35625 211 aa6.61□□□□□ -1.35
PDLIM5-219ENST00000514743 SMAGPQ0VAQ4 97 aa6.61□□□□□ -1.35
PDLIM5-219ENST00000514743 KIR2DS5Q14953 304 aa6.61□□□□□ -1.35
PDLIM5-219ENST00000514743 PHYHD1Q5SRE7 291 aa6.61□□□□□ -1.35
PDLIM5-219ENST00000514743 PLCXD3Q63HM9 321 aa6.61□□□□□ -1.35
PDLIM5-219ENST00000514743 OR4A47Q6IF82 309 aa6.61□□□□□ -1.35
PDLIM5-219ENST00000514743 Q6ZVH6 145 aa6.61□□□□□ -1.35
PDLIM5-219ENST00000514743 YRDCQ86U90 279 aaKnown RBP6.61□□□□□ -1.35
PDLIM5-219ENST00000514743 TSTD1Q8NFU3 115 aa6.61□□□□□ -1.35
PDLIM5-219ENST00000514743 OR4P4Q8NGL7 312 aa6.61□□□□□ -1.35
PDLIM5-219ENST00000514743 NEIL3Q8TAT5 605 aa6.61□□□□□ -1.35
PDLIM5-219ENST00000514743 ZBTB8AQ96BR9 441 aa6.61□□□□□ -1.35
PDLIM5-219ENST00000514743 CIB3Q96Q77 187 aaPredicted RBP6.61□□□□□ -1.35
PDLIM5-219ENST00000514743 NELFAQ9H3P2 528 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms