RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 MAB21L2Q9Y586 359 aa8.58□□□□□ -1.04
HMGXB3-205ENST00000514469 CMYA5Q8N3K9 4069 aa8.58□□□□□ -1.04
HMGXB3-205ENST00000514469 TRBV23-1A0A0A0MS06 115 aa8.57□□□□□ -1.04
HMGXB3-205ENST00000514469 A0A1W2PQ09 198 aa8.57□□□□□ -1.04
HMGXB3-205ENST00000514469 A0A1W2PQL4 384 aaPredicted RBP8.57□□□□□ -1.04
HMGXB3-205ENST00000514469 SAC3D1A6NKF1 404 aa8.57□□□□□ -1.04
HMGXB3-205ENST00000514469 NPFFO15130 113 aa8.57□□□□□ -1.04
HMGXB3-205ENST00000514469 SYNGR1O43759 233 aa8.57□□□□□ -1.04
HMGXB3-205ENST00000514469 NOS1APO75052 506 aaPredicted RBP8.57□□□□□ -1.04
HMGXB3-205ENST00000514469 APOL3O95236 402 aa8.57□□□□□ -1.04
HMGXB3-205ENST00000514469 KRT8P05787 483 aa8.57□□□□□ -1.04
HMGXB3-205ENST00000514469 OR2T7P0C7T2 308 aa8.57□□□□□ -1.04
HMGXB3-205ENST00000514469 NDUFB7P17568 137 aa8.57□□□□□ -1.04
HMGXB3-205ENST00000514469 MPZP25189 248 aa8.57□□□□□ -1.04
HMGXB3-205ENST00000514469 HAAOP46952 286 aa8.57□□□□□ -1.04
HMGXB3-205ENST00000514469 GABRA2P47869 451 aa8.57□□□□□ -1.04
HMGXB3-205ENST00000514469 DLX1P56177 255 aa8.57□□□□□ -1.04
HMGXB3-205ENST00000514469 ISL1P61371 349 aa8.57□□□□□ -1.04
HMGXB3-205ENST00000514469 PRB3Q04118 309 aaPredicted RBP8.57□□□□□ -1.04
HMGXB3-205ENST00000514469 KLRD1Q13241 179 aa8.57□□□□□ -1.04
HMGXB3-205ENST00000514469 TMED1Q13445 227 aa8.57□□□□□ -1.04
HMGXB3-205ENST00000514469 NCR3LG1Q68D85 454 aa8.57□□□□□ -1.04
HMGXB3-205ENST00000514469 ZNF573Q86YE8 665 aa8.57□□□□□ -1.04
HMGXB3-205ENST00000514469 YIPF7Q8N8F6 280 aa8.57□□□□□ -1.04
HMGXB3-205ENST00000514469 TMEM185AQ8NFB2 350 aa8.57□□□□□ -1.04
HMGXB3-205ENST00000514469 OR8J1Q8NGP2 316 aa8.57□□□□□ -1.04
HMGXB3-205ENST00000514469 OR2T27Q8NH04 317 aa8.57□□□□□ -1.04
HMGXB3-205ENST00000514469 OR4F5Q8NH21 305 aa8.57□□□□□ -1.04
HMGXB3-205ENST00000514469 ZNF488Q96MN9 340 aa8.57□□□□□ -1.04
HMGXB3-205ENST00000514469 TBX5Q99593 518 aa8.57□□□□□ -1.04
HMGXB3-205ENST00000514469 RBM4BQ9BQ04 359 aaKnown RBP8.57□□□□□ -1.04
HMGXB3-205ENST00000514469 NRIP2Q9BQI9 281 aa8.57□□□□□ -1.04
HMGXB3-205ENST00000514469 METTL8Q9H825 291 aaKnown RBP8.57□□□□□ -1.04
HMGXB3-205ENST00000514469 BEX1Q9HBH7 125 aa8.57□□□□□ -1.04
HMGXB3-205ENST00000514469 HES4Q9HCC6 221 aa8.57□□□□□ -1.04
HMGXB3-205ENST00000514469 POLDIP2Q9Y2S7 368 aa8.57□□□□□ -1.04
HMGXB3-205ENST00000514469 ANKRD61A6NGH8 418 aa8.56□□□□□ -1.04
HMGXB3-205ENST00000514469 METTL15A6NJ78 407 aa8.56□□□□□ -1.04
HMGXB3-205ENST00000514469 E9PQ18 207 aa8.56□□□□□ -1.04
HMGXB3-205ENST00000514469 GPR137BO60478 399 aa8.56□□□□□ -1.04
HMGXB3-205ENST00000514469 SULT1C4O75897 302 aa8.56□□□□□ -1.04
HMGXB3-205ENST00000514469 RPP14O95059 124 aaKnown RBP8.56□□□□□ -1.04
HMGXB3-205ENST00000514469 KNG1P01042 644 aa8.56□□□□□ -1.04
HMGXB3-205ENST00000514469 CRYBA1P05813 215 aa8.56□□□□□ -1.04
HMGXB3-205ENST00000514469 FBP1P09467 338 aa8.56□□□□□ -1.04
HMGXB3-205ENST00000514469 EEF1B2P24534 225 aaKnown RBP8.56□□□□□ -1.04
HMGXB3-205ENST00000514469 UBE2E1P51965 193 aa8.56□□□□□ -1.04
HMGXB3-205ENST00000514469 CDC42P60953 191 aa8.56□□□□□ -1.04
HMGXB3-205ENST00000514469 TAF9Q16594 264 aa8.56□□□□□ -1.04
HMGXB3-205ENST00000514469 OLFML2AQ68BL7 652 aa8.56□□□□□ -1.04
HMGXB3-205ENST00000514469 HCP5Q6MZN7 132 aa8.56□□□□□ -1.04
HMGXB3-205ENST00000514469 ZNF561Q8N587 486 aa8.56□□□□□ -1.04
HMGXB3-205ENST00000514469 CD177Q8N6Q3 437 aa8.56□□□□□ -1.04
HMGXB3-205ENST00000514469 OR10H4Q8NGA5 316 aa8.56□□□□□ -1.04
HMGXB3-205ENST00000514469 PYDC1Q8WXC3 89 aa8.56□□□□□ -1.04
HMGXB3-205ENST00000514469 RORBQ92753 470 aa8.56□□□□□ -1.04
HMGXB3-205ENST00000514469 RFKQ969G6 155 aa8.56□□□□□ -1.04
HMGXB3-205ENST00000514469 EME1Q96AY2 570 aa8.56□□□□□ -1.04
HMGXB3-205ENST00000514469 PKIBQ9C010 78 aa8.56□□□□□ -1.04
HMGXB3-205ENST00000514469 DPAGT1Q9H3H5 408 aa8.56□□□□□ -1.04
HMGXB3-205ENST00000514469 C19orf12Q9NSK7 152 aa8.56□□□□□ -1.04
HMGXB3-205ENST00000514469 USE1Q9NZ43 259 aa8.56□□□□□ -1.04
HMGXB3-205ENST00000514469 CAB39Q9Y376 341 aaPredicted RBP8.56□□□□□ -1.04
HMGXB3-205ENST00000514469 FAM96BQ9Y3D0 163 aa8.56□□□□□ -1.04
HMGXB3-205ENST00000514469 CLPSL1A2RUU4 121 aa8.55□□□□□ -1.04
HMGXB3-205ENST00000514469 A6NIN4 97 aa8.55□□□□□ -1.04
HMGXB3-205ENST00000514469 RFPL4AA6NLU0 287 aa8.55□□□□□ -1.04
HMGXB3-205ENST00000514469 RFPL4AL1F8VTS6 287 aa8.55□□□□□ -1.04
HMGXB3-205ENST00000514469 H3BNX3 289 aa8.55□□□□□ -1.04
HMGXB3-205ENST00000514469 SLC1A7O00341 560 aa8.55□□□□□ -1.04
HMGXB3-205ENST00000514469 NXPH2O95156 264 aa8.55□□□□□ -1.04
HMGXB3-205ENST00000514469 ALPLP05186 524 aa8.55□□□□□ -1.04
HMGXB3-205ENST00000514469 PRDX2P32119 198 aa8.55□□□□□ -1.04
HMGXB3-205ENST00000514469 SAA4P35542 130 aa8.55□□□□□ -1.04
HMGXB3-205ENST00000514469 KIR3DL2P43630 455 aa8.55□□□□□ -1.04
HMGXB3-205ENST00000514469 CEBPDP49716 269 aaPredicted RBP8.55□□□□□ -1.04
HMGXB3-205ENST00000514469 ERVK11-1P61568 191 aa8.55□□□□□ -1.04
HMGXB3-205ENST00000514469 ZNF85Q03923 595 aa8.55□□□□□ -1.04
HMGXB3-205ENST00000514469 ACSM1Q08AH1 577 aa8.55□□□□□ -1.04
HMGXB3-205ENST00000514469 IL24Q13007 206 aa8.55□□□□□ -1.04
HMGXB3-205ENST00000514469 BLMHQ13867 455 aa8.55□□□□□ -1.04
HMGXB3-205ENST00000514469 ODF4Q2M2E3 257 aa8.55□□□□□ -1.04
HMGXB3-205ENST00000514469 GDPGP1Q6ZNW5 385 aa8.55□□□□□ -1.04
HMGXB3-205ENST00000514469 CALHM1Q8IU99 346 aa8.55□□□□□ -1.04
HMGXB3-205ENST00000514469 FAM185AQ8N0U4 392 aa8.55□□□□□ -1.04
HMGXB3-205ENST00000514469 PRSS35Q8N3Z0 413 aa8.55□□□□□ -1.04
HMGXB3-205ENST00000514469 PNKDQ8N490 385 aa8.55□□□□□ -1.04
HMGXB3-205ENST00000514469 CCDC54Q8NEL0 328 aa8.55□□□□□ -1.04
HMGXB3-205ENST00000514469 OR5D13Q8NGL4 314 aa8.55□□□□□ -1.04
HMGXB3-205ENST00000514469 RNF166Q96A37 237 aaPredicted RBP8.55□□□□□ -1.04
HMGXB3-205ENST00000514469 CHST5Q9GZS9 411 aa8.55□□□□□ -1.04
HMGXB3-205ENST00000514469 PLEKHA1Q9HB21 404 aa8.55□□□□□ -1.04
HMGXB3-205ENST00000514469 VPREB3Q9UKI3 123 aa8.55□□□□□ -1.04
HMGXB3-205ENST00000514469 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.55□□□□□ -1.04
HMGXB3-205ENST00000514469 MGAM2Q2M2H8 2515 aa8.54□□□□□ -1.04
HMGXB3-205ENST00000514469 DOCK11Q5JSL3 2073 aa8.54□□□□□ -1.04
HMGXB3-205ENST00000514469 IGKV1-27A0A075B6S5 117 aa8.54□□□□□ -1.04
HMGXB3-205ENST00000514469 LOC107986453A0A1B0GWG9 222 aa8.54□□□□□ -1.04
HMGXB3-205ENST00000514469 A0A1W2PRD5 423 aa8.54□□□□□ -1.04
HMGXB3-205ENST00000514469 A0A1W2PRF3 423 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms