RNA–Protein interactions for RNA: ENST00000514344.5

CHD1-211, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 2,955 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-211ENST00000514344 CLIC1O00299 241 aa2.46□□□□□ -2.01
CHD1-211ENST00000514344 DCTN6O00399 190 aa2.46□□□□□ -2.01
CHD1-211ENST00000514344 TBX1O43435 398 aa2.46□□□□□ -2.01
CHD1-211ENST00000514344 ITM2AO43736 263 aa2.46□□□□□ -2.01
CHD1-211ENST00000514344 RRP9O43818 475 aaKnown RBP2.46□□□□□ -2.01
CHD1-211ENST00000514344 TPPPO94811 219 aa2.46□□□□□ -2.01
CHD1-211ENST00000514344 IGKV1D-33P01593 117 aa2.46□□□□□ -2.01
CHD1-211ENST00000514344 IGKV1-33P01594 117 aa2.46□□□□□ -2.01
CHD1-211ENST00000514344 IGHV3-7P01780 117 aa2.46□□□□□ -2.01
CHD1-211ENST00000514344 IGHG4P01861 327 aa2.46□□□□□ -2.01
CHD1-211ENST00000514344 TK1P04183 234 aa2.46□□□□□ -2.01
CHD1-211ENST00000514344 SHBGP04278 402 aa2.46□□□□□ -2.01
CHD1-211ENST00000514344 CD7P09564 240 aa2.46□□□□□ -2.01
CHD1-211ENST00000514344 RHCEP18577 417 aa2.46□□□□□ -2.01
CHD1-211ENST00000514344 CD247P20963 164 aa2.46□□□□□ -2.01
CHD1-211ENST00000514344 YAP1P46937 504 aaKnown RBP2.46□□□□□ -2.01
CHD1-211ENST00000514344 GPR12P47775 334 aa2.46□□□□□ -2.01
CHD1-211ENST00000514344 GPM6AP51674 278 aa2.46□□□□□ -2.01
CHD1-211ENST00000514344 RAP1BP61224 184 aa2.46□□□□□ -2.01
CHD1-211ENST00000514344 RAP1AP62834 184 aa2.46□□□□□ -2.01
CHD1-211ENST00000514344 CDK6Q00534 326 aa2.46□□□□□ -2.01
CHD1-211ENST00000514344 RFX4Q33E94 735 aa2.46□□□□□ -2.01
CHD1-211ENST00000514344 TMEM177Q53S58 311 aa2.46□□□□□ -2.01
CHD1-211ENST00000514344 REEP3Q6NUK4 255 aa2.46□□□□□ -2.01
CHD1-211ENST00000514344 LINC00322Q6ZN03 302 aaPredicted RBP2.46□□□□□ -2.01
CHD1-211ENST00000514344 SLC16A9Q7RTY1 509 aa2.46□□□□□ -2.01
CHD1-211ENST00000514344 ZBTB46Q86UZ6 589 aa2.46□□□□□ -2.01
CHD1-211ENST00000514344 ZNF561Q8N587 486 aa2.46□□□□□ -2.01
CHD1-211ENST00000514344 RNF152Q8N8N0 203 aa2.46□□□□□ -2.01
CHD1-211ENST00000514344 EPS8L3Q8TE67 593 aaKnown RBP2.46□□□□□ -2.01
CHD1-211ENST00000514344 UBLCP1Q8WVY7 318 aaPredicted RBP2.46□□□□□ -2.01
CHD1-211ENST00000514344 HRASLS5Q96KN8 279 aa2.46□□□□□ -2.01
CHD1-211ENST00000514344 UBE2E2Q96LR5 201 aa2.46□□□□□ -2.01
CHD1-211ENST00000514344 PAIP1Q9H074 479 aaKnown RBP2.46□□□□□ -2.01
CHD1-211ENST00000514344 IKZF5Q9H5V7 419 aa2.46□□□□□ -2.01
CHD1-211ENST00000514344 SRD5A3Q9H8P0 318 aa2.46□□□□□ -2.01
CHD1-211ENST00000514344 TPSG1Q9NRR2 321 aa2.46□□□□□ -2.01
CHD1-211ENST00000514344 ZDHHC18Q9NUE0 388 aa2.46□□□□□ -2.01
CHD1-211ENST00000514344 ASIC5Q9NY37 505 aa2.46□□□□□ -2.01
CHD1-211ENST00000514344 VSIG4Q9Y279 399 aa2.46□□□□□ -2.01
CHD1-211ENST00000514344 MYRFQ9Y2G1 1151 aa2.46□□□□□ -2.01
CHD1-211ENST00000514344 SH3GLB1Q9Y371 365 aa2.46□□□□□ -2.01
CHD1-211ENST00000514344 FBXO7Q9Y3I1 522 aa2.46□□□□□ -2.01
CHD1-211ENST00000514344 HMCN2Q8NDA2 5059 aa2.46□□□□□ -2.02
CHD1-211ENST00000514344 DNAH5Q8TE73 4624 aa2.46□□□□□ -2.02
CHD1-211ENST00000514344 PRORSD1PA6NEY8 169 aa2.46□□□□□ -2.02
CHD1-211ENST00000514344 ZNF850A8MQ14 1090 aa2.46□□□□□ -2.02
CHD1-211ENST00000514344 ZSCAN12O43309 604 aa2.46□□□□□ -2.02
CHD1-211ENST00000514344 SERPINB7O75635 380 aa2.46□□□□□ -2.02
CHD1-211ENST00000514344 IGHV3-11P01762 117 aa2.46□□□□□ -2.02
CHD1-211ENST00000514344 SLC2A2P11168 524 aaPredicted RBP2.46□□□□□ -2.02
CHD1-211ENST00000514344 ALDH3A1P30838 453 aa2.46□□□□□ -2.02
CHD1-211ENST00000514344 PRDX2P32119 198 aa2.46□□□□□ -2.02
CHD1-211ENST00000514344 ZP1P60852 638 aa2.46□□□□□ -2.02
CHD1-211ENST00000514344 ZNF45Q02386 682 aa2.46□□□□□ -2.02
CHD1-211ENST00000514344 GDPD3Q7L5L3 318 aa2.46□□□□□ -2.02
CHD1-211ENST00000514344 TCF23Q7RTU1 214 aa2.46□□□□□ -2.02
CHD1-211ENST00000514344 MAVSQ7Z434 540 aa2.46□□□□□ -2.02
CHD1-211ENST00000514344 TRAPPC6BQ86SZ2 158 aa2.46□□□□□ -2.02
CHD1-211ENST00000514344 CALHM1Q8IU99 346 aa2.46□□□□□ -2.02
CHD1-211ENST00000514344 ZNF781Q8N8C0 355 aa2.46□□□□□ -2.02
CHD1-211ENST00000514344 ZNF491Q8N8L2 437 aa2.46□□□□□ -2.02
CHD1-211ENST00000514344 CYB561A3Q8NBI2 242 aa2.46□□□□□ -2.02
CHD1-211ENST00000514344 OR2AJ1Q8NGZ0 328 aa2.46□□□□□ -2.02
CHD1-211ENST00000514344 ACMSDQ8TDX5 336 aa2.46□□□□□ -2.02
CHD1-211ENST00000514344 TMEM239Q8WW34 195 aa2.46□□□□□ -2.02
CHD1-211ENST00000514344 RNF170Q96K19 258 aa2.46□□□□□ -2.02
CHD1-211ENST00000514344 KCTD7Q96MP8 289 aa2.46□□□□□ -2.02
CHD1-211ENST00000514344 ZNF570Q96NI8 536 aa2.46□□□□□ -2.02
CHD1-211ENST00000514344 MICU1Q9BPX6 476 aa2.46□□□□□ -2.02
CHD1-211ENST00000514344 HSPB9Q9BQS6 159 aa2.46□□□□□ -2.02
CHD1-211ENST00000514344 RTL8AQ9BWD3 113 aa2.46□□□□□ -2.02
CHD1-211ENST00000514344 TLNRD1Q9H1K6 362 aa2.46□□□□□ -2.02
CHD1-211ENST00000514344 STUB1Q9UNE7 303 aa2.46□□□□□ -2.02
CHD1-211ENST00000514344 WSB1Q9Y6I7 421 aa2.46□□□□□ -2.02
CHD1-211ENST00000514344 IGHV3-72A0A0B4J1Y9 119 aa2.46□□□□□ -2.02
CHD1-211ENST00000514344 FAM183AA6NL82 134 aa2.46□□□□□ -2.02
CHD1-211ENST00000514344 OR11H12B2RN74 326 aa2.46□□□□□ -2.02
CHD1-211ENST00000514344 G3V318 75 aa2.46□□□□□ -2.02
CHD1-211ENST00000514344 SOCS2O14508 198 aa2.46□□□□□ -2.02
CHD1-211ENST00000514344 FGF16O43320 207 aa2.46□□□□□ -2.02
CHD1-211ENST00000514344 KHDRBS3O75525 346 aaKnown RBP2.46□□□□□ -2.02
CHD1-211ENST00000514344 RGS11O94810 467 aa2.46□□□□□ -2.02
CHD1-211ENST00000514344 HLA-DQA2P01906 255 aa2.46□□□□□ -2.02
CHD1-211ENST00000514344 TSPAN19P0C672 248 aa2.46□□□□□ -2.02
CHD1-211ENST00000514344 IFI30P13284 250 aa2.46□□□□□ -2.02
CHD1-211ENST00000514344 CEACAM3P40198 252 aa2.46□□□□□ -2.02
CHD1-211ENST00000514344 HIST1H3AP68431 136 aa2.46□□□□□ -2.02
CHD1-211ENST00000514344 FAM3AP98173 230 aa2.46□□□□□ -2.02
CHD1-211ENST00000514344 PIN1Q13526 163 aaPredicted RBP2.46□□□□□ -2.02
CHD1-211ENST00000514344 SCARB2Q14108 478 aa2.46□□□□□ -2.02
CHD1-211ENST00000514344 EIF2B1Q14232 305 aaKnown RBP2.46□□□□□ -2.02
CHD1-211ENST00000514344 DIAPH2-AS1Q14236 149 aa2.46□□□□□ -2.02
CHD1-211ENST00000514344 CEP78Q5JTW2 689 aa2.46□□□□□ -2.02
CHD1-211ENST00000514344 UTF1Q5T230 341 aa2.46□□□□□ -2.02
CHD1-211ENST00000514344 TPTE2P1Q5T6R2 138 aa2.46□□□□□ -2.02
CHD1-211ENST00000514344 LCE5AQ5TCM9 118 aa2.46□□□□□ -2.02
CHD1-211ENST00000514344 HIST2H3PS2Q5TEC6 136 aa2.46□□□□□ -2.02
CHD1-211ENST00000514344 PRAMEF5Q5TYX0 476 aa2.46□□□□□ -2.02
CHD1-211ENST00000514344 SLC18B1Q6NT16 456 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms