RNA–Protein interactions for RNA: ENST00000514305.5

USP53-208, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-208ENST00000514305 Q8TCH9 128 aa17■□□□□ 0.31
USP53-208ENST00000514305 TMEM203Q969S6 136 aa17■□□□□ 0.31
USP53-208ENST00000514305 GCM1Q9NP62 436 aa17■□□□□ 0.31
USP53-208ENST00000514305 TMEM138Q9NPI0 162 aa17■□□□□ 0.31
USP53-208ENST00000514305 SCOCQ9UIL1 159 aa17■□□□□ 0.31
USP53-208ENST00000514305 KCNS2Q9ULS6 477 aa17■□□□□ 0.31
USP53-208ENST00000514305 SSR3Q9UNL2 185 aa17■□□□□ 0.31
USP53-208ENST00000514305 POLDIP2Q9Y2S7 368 aa17■□□□□ 0.31
USP53-208ENST00000514305 TRBV5-7A0A0A0MS05 114 aa16.99■□□□□ 0.31
USP53-208ENST00000514305 CDC14BO60729 498 aa16.99■□□□□ 0.31
USP53-208ENST00000514305 NCR1O76036 304 aa16.99■□□□□ 0.31
USP53-208ENST00000514305 ALDOBP05062 364 aa16.99■□□□□ 0.31
USP53-208ENST00000514305 FSTP19883 344 aa16.99■□□□□ 0.31
USP53-208ENST00000514305 AZGP1P25311 298 aaKnown RBP16.99■□□□□ 0.31
USP53-208ENST00000514305 HSD17B12Q53GQ0 312 aa16.99■□□□□ 0.31
USP53-208ENST00000514305 LCE2AQ5TA79 106 aaPredicted RBP16.99■□□□□ 0.31
USP53-208ENST00000514305 FAM166AQ6J272 317 aa16.99■□□□□ 0.31
USP53-208ENST00000514305 MOGAT3Q86VF5 341 aa16.99■□□□□ 0.31
USP53-208ENST00000514305 OR13C5Q8NGS8 318 aa16.99■□□□□ 0.31
USP53-208ENST00000514305 HPSE2Q8WWQ2 592 aa16.99■□□□□ 0.31
USP53-208ENST00000514305 RAB1CQ92928 201 aa16.99■□□□□ 0.31
USP53-208ENST00000514305 DVL3Q92997 716 aaPredicted RBP16.99■□□□□ 0.31
USP53-208ENST00000514305 DERL3Q96Q80 235 aa16.99■□□□□ 0.31
USP53-208ENST00000514305 NOX4Q9NPH5 578 aa16.99■□□□□ 0.31
USP53-208ENST00000514305 TMEM106BQ9NUM4 274 aa16.99■□□□□ 0.31
USP53-208ENST00000514305 RNF7Q9UBF6 113 aa16.99■□□□□ 0.31
USP53-208ENST00000514305 SF3B6Q9Y3B4 125 aaKnown RBP16.99■□□□□ 0.31
USP53-208ENST00000514305 MALRD1Q5VYJ5 2156 aa16.99■□□□□ 0.31
USP53-208ENST00000514305 LOC100289279A0A1B0GTE1 492 aa16.98■□□□□ 0.31
USP53-208ENST00000514305 hCG_1807616A0A1W2PRN6 198 aa16.98■□□□□ 0.31
USP53-208ENST00000514305 SNRPBP14678 240 aaKnown RBP16.98■□□□□ 0.31
USP53-208ENST00000514305 BDKRB2P30411 391 aa16.98■□□□□ 0.31
USP53-208ENST00000514305 MTCP1P56278 107 aa16.98■□□□□ 0.31
USP53-208ENST00000514305 RPS25P62851 125 aaKnown RBP16.98■□□□□ 0.31
USP53-208ENST00000514305 ZNF154Q13106 437 aa16.98■□□□□ 0.31
USP53-208ENST00000514305 KCNJ8Q15842 424 aa16.98■□□□□ 0.31
USP53-208ENST00000514305 CDH26Q8IXH8 852 aa16.98■□□□□ 0.31
USP53-208ENST00000514305 PNLDC1Q8NA58 520 aaKnown RBP16.98■□□□□ 0.31
USP53-208ENST00000514305 OR10Z1Q8NGY1 313 aa16.98■□□□□ 0.31
USP53-208ENST00000514305 TLNRD1Q9H1K6 362 aa16.98■□□□□ 0.31
USP53-208ENST00000514305 UFSP2Q9NUQ7 469 aa16.98■□□□□ 0.31
USP53-208ENST00000514305 STUB1Q9UNE7 303 aa16.98■□□□□ 0.31
USP53-208ENST00000514305 TRDV1A0A1B0GX56 115 aa16.97■□□□□ 0.31
USP53-208ENST00000514305 PQLC2LA1A4F0 135 aa16.97■□□□□ 0.31
USP53-208ENST00000514305 GABRPO00591 440 aa16.97■□□□□ 0.31
USP53-208ENST00000514305 PHF1O43189 567 aaPredicted RBP16.97■□□□□ 0.31
USP53-208ENST00000514305 SC5DO75845 299 aa16.97■□□□□ 0.31
USP53-208ENST00000514305 CD36P16671 472 aa16.97■□□□□ 0.31
USP53-208ENST00000514305 HNF1AP20823 631 aa16.97■□□□□ 0.31
USP53-208ENST00000514305 COL8A2P25067 703 aa16.97■□□□□ 0.31
USP53-208ENST00000514305 THBS2P35442 1172 aa16.97■□□□□ 0.31
USP53-208ENST00000514305 GPR6P46095 362 aaPredicted RBP16.97■□□□□ 0.31
USP53-208ENST00000514305 HAAOP46952 286 aa16.97■□□□□ 0.31
USP53-208ENST00000514305 PSMD7P51665 324 aa16.97■□□□□ 0.31
USP53-208ENST00000514305 SSX1Q16384 188 aa16.97■□□□□ 0.31
USP53-208ENST00000514305 PRAMEF6Q5VXH4 476 aa16.97■□□□□ 0.31
USP53-208ENST00000514305 TREML4Q6UXN2 200 aa16.97■□□□□ 0.31
USP53-208ENST00000514305 GDPGP1Q6ZNW5 385 aa16.97■□□□□ 0.31
USP53-208ENST00000514305 MKXQ8IYA7 352 aa16.97■□□□□ 0.31
USP53-208ENST00000514305 NKAIN3Q8N8D7 197 aa16.97■□□□□ 0.31
USP53-208ENST00000514305 TRMT10AQ8TBZ6 339 aaKnown RBP16.97■□□□□ 0.31
USP53-208ENST00000514305 FOXRED1Q96CU9 486 aaPredicted RBP16.97■□□□□ 0.31
USP53-208ENST00000514305 GPER1Q99527 375 aa16.97■□□□□ 0.31
USP53-208ENST00000514305 PKIBQ9C010 78 aa16.97■□□□□ 0.31
USP53-208ENST00000514305 OR51I2Q9H344 312 aa16.97■□□□□ 0.31
USP53-208ENST00000514305 C1orf123Q9NWV4 160 aa16.97■□□□□ 0.31
USP53-208ENST00000514305 TAS2R4Q9NYW5 299 aa16.97■□□□□ 0.31
USP53-208ENST00000514305 FBN3Q75N90 2809 aa16.96■□□□□ 0.31
USP53-208ENST00000514305 J3QT63 122 aa16.96■□□□□ 0.31
USP53-208ENST00000514305 PPIHO43447 177 aaKnown RBP16.96■□□□□ 0.31
USP53-208ENST00000514305 UCHL1P09936 223 aa16.96■□□□□ 0.31
USP53-208ENST00000514305 SRMP19623 302 aa16.96■□□□□ 0.31
USP53-208ENST00000514305 MYL9P24844 172 aa16.96■□□□□ 0.31
USP53-208ENST00000514305 CFHR2P36980 270 aa16.96■□□□□ 0.31
USP53-208ENST00000514305 GP2P55259 537 aaKnown RBP16.96■□□□□ 0.31
USP53-208ENST00000514305 TUSC1Q2TAM9 212 aa16.96■□□□□ 0.31
USP53-208ENST00000514305 ZNF529Q6P280 563 aa16.96■□□□□ 0.31
USP53-208ENST00000514305 CD200R1LQ6Q8B3 271 aa16.96■□□□□ 0.31
USP53-208ENST00000514305 SCCPDHQ8NBX0 429 aa16.96■□□□□ 0.31
USP53-208ENST00000514305 NPRL2Q8WTW4 380 aa16.96■□□□□ 0.31
USP53-208ENST00000514305 MSI2Q96DH6 328 aaKnown RBP16.96■□□□□ 0.31
USP53-208ENST00000514305 BPESC1Q9GZL8 116 aa16.96■□□□□ 0.31
USP53-208ENST00000514305 EXOSC4Q9NPD3 245 aaKnown RBP16.96■□□□□ 0.31
USP53-208ENST00000514305 PCDHB16Q9NRJ7 776 aa16.96■□□□□ 0.31
USP53-208ENST00000514305 NPTNQ9Y639 398 aa16.96■□□□□ 0.31
USP53-208ENST00000514305 IGHV4-61A0A0C4DH41 118 aa16.95■□□□□ 0.3
USP53-208ENST00000514305 A0A1W2PPK0 400 aa16.95■□□□□ 0.3
USP53-208ENST00000514305 CDIPTO14735 213 aa16.95■□□□□ 0.3
USP53-208ENST00000514305 PDCD5O14737 125 aa16.95■□□□□ 0.3
USP53-208ENST00000514305 IGFBP3P17936 291 aaPredicted RBP16.95■□□□□ 0.3
USP53-208ENST00000514305 SRD5A1P18405 259 aa16.95■□□□□ 0.3
USP53-208ENST00000514305 GIFP27352 417 aa16.95■□□□□ 0.3
USP53-208ENST00000514305 FABP5Q01469 135 aa16.95■□□□□ 0.3
USP53-208ENST00000514305 MPPED2Q15777 294 aa16.95■□□□□ 0.3
USP53-208ENST00000514305 GLT8D1Q68CQ7 371 aa16.95■□□□□ 0.3
USP53-208ENST00000514305 HAGHLQ6PII5 290 aaPredicted RBP16.95■□□□□ 0.3
USP53-208ENST00000514305 SATL1Q86VE3 508 aa16.95■□□□□ 0.3
USP53-208ENST00000514305 RPL3LQ92901 407 aaKnown RBP16.95■□□□□ 0.3
USP53-208ENST00000514305 YIPF5Q969M3 257 aa16.95■□□□□ 0.3
USP53-208ENST00000514305 S100A13Q99584 98 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms