RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 RNF141Q8WVD5 230 aa3.76□□□□□ -1.81
VCAN-209ENST00000513016 MYO9BQ13459 2157 aa3.76□□□□□ -1.81
VCAN-209ENST00000513016 A0A1W2PR77 199 aa3.76□□□□□ -1.81
VCAN-209ENST00000513016 CLEC18AA5D8T8 446 aa3.76□□□□□ -1.81
VCAN-209ENST00000513016 BOLA2-SMG1P6H3BVE0 249 aa3.76□□□□□ -1.81
VCAN-209ENST00000513016 ADRA2AP08913 450 aa3.76□□□□□ -1.81
VCAN-209ENST00000513016 CBR1P16152 277 aa3.76□□□□□ -1.81
VCAN-209ENST00000513016 FCARP24071 287 aa3.76□□□□□ -1.81
VCAN-209ENST00000513016 OPRK1P41145 380 aa3.76□□□□□ -1.81
VCAN-209ENST00000513016 DSCR9P59020 149 aa3.76□□□□□ -1.81
VCAN-209ENST00000513016 ZNF816Q0VGE8 651 aaPredicted RBP3.76□□□□□ -1.81
VCAN-209ENST00000513016 MPV17LQ2QL34 196 aa3.76□□□□□ -1.81
VCAN-209ENST00000513016 TMEM30BQ3MIR4 351 aa3.76□□□□□ -1.81
VCAN-209ENST00000513016 PHYHD1Q5SRE7 291 aa3.76□□□□□ -1.81
VCAN-209ENST00000513016 PCSK4Q6UW60 755 aa3.76□□□□□ -1.81
VCAN-209ENST00000513016 CLEC18CQ8NCF0 446 aa3.76□□□□□ -1.81
VCAN-209ENST00000513016 RPS10P5Q9NQ39 176 aa3.76□□□□□ -1.81
VCAN-209ENST00000513016 A0A1W2PS18 150 aa3.76□□□□□ -1.81
VCAN-209ENST00000513016 IFI6P09912 130 aa3.76□□□□□ -1.81
VCAN-209ENST00000513016 ETFDHQ16134 617 aa3.76□□□□□ -1.81
VCAN-209ENST00000513016 ARRDC1Q8N5I2 433 aa3.76□□□□□ -1.81
VCAN-209ENST00000513016 ZBTB34Q8NCN2 500 aa3.76□□□□□ -1.81
VCAN-209ENST00000513016 ZNF439Q8NDP4 499 aa3.76□□□□□ -1.81
VCAN-209ENST00000513016 OR51S1Q8NGJ8 323 aa3.76□□□□□ -1.81
VCAN-209ENST00000513016 BCL2L2Q92843 193 aaPredicted RBP3.76□□□□□ -1.81
VCAN-209ENST00000513016 TRAV1-2A0A0B4J238 106 aa3.76□□□□□ -1.81
VCAN-209ENST00000513016 NUPL2O15504 423 aaKnown RBP3.76□□□□□ -1.81
VCAN-209ENST00000513016 PGA3P0DJD8 388 aa3.76□□□□□ -1.81
VCAN-209ENST00000513016 SCAND1P57086 179 aa3.76□□□□□ -1.81
VCAN-209ENST00000513016 GUCA2AQ02747 115 aa3.76□□□□□ -1.81
VCAN-209ENST00000513016 KISS1Q15726 138 aa3.76□□□□□ -1.81
VCAN-209ENST00000513016 OR2G3Q8NGZ4 309 aa3.76□□□□□ -1.81
VCAN-209ENST00000513016 OR8U1Q8NH10 309 aa3.76□□□□□ -1.81
VCAN-209ENST00000513016 DUS3LQ96G46 650 aaKnown RBP3.76□□□□□ -1.81
VCAN-209ENST00000513016 PLPPR2Q96GM1 343 aa3.76□□□□□ -1.81
VCAN-209ENST00000513016 VSTM2LQ96N03 204 aa3.76□□□□□ -1.81
VCAN-209ENST00000513016 OR2H1Q9GZK4 316 aa3.76□□□□□ -1.81
VCAN-209ENST00000513016 OR51I2Q9H344 312 aa3.76□□□□□ -1.81
VCAN-209ENST00000513016 TMEM165Q9HC07 324 aa3.76□□□□□ -1.81
VCAN-209ENST00000513016 YAE1D1Q9NRH1 226 aa3.76□□□□□ -1.81
VCAN-209ENST00000513016 MED9Q9NWA0 146 aa3.76□□□□□ -1.81
VCAN-209ENST00000513016 A0A0B4J2A0 478 aa3.76□□□□□ -1.81
VCAN-209ENST00000513016 GNG7O60262 68 aa3.76□□□□□ -1.81
VCAN-209ENST00000513016 SNAPINO95295 136 aa3.76□□□□□ -1.81
VCAN-209ENST00000513016 HAND1O96004 215 aa3.76□□□□□ -1.81
VCAN-209ENST00000513016 SNRNP70P08621 437 aaKnown RBP3.76□□□□□ -1.81
VCAN-209ENST00000513016 CCDC71Q8IV32 467 aaPredicted RBP3.76□□□□□ -1.81
VCAN-209ENST00000513016 DEDD2Q8WXF8 326 aa3.76□□□□□ -1.81
VCAN-209ENST00000513016 MARS2Q96GW9 593 aaKnown RBP3.76□□□□□ -1.81
VCAN-209ENST00000513016 SLC25A10Q9UBX3 287 aaPredicted RBP3.76□□□□□ -1.81
VCAN-209ENST00000513016 SHPKQ9UHJ6 478 aa3.76□□□□□ -1.81
VCAN-209ENST00000513016 SIGLEC7Q9Y286 467 aa3.76□□□□□ -1.81
VCAN-209ENST00000513016 CYR61O00622 381 aa3.76□□□□□ -1.81
VCAN-209ENST00000513016 WNT1P04628 370 aa3.76□□□□□ -1.81
VCAN-209ENST00000513016 PF4V1P10720 104 aa3.76□□□□□ -1.81
VCAN-209ENST00000513016 MC5RP33032 325 aa3.76□□□□□ -1.81
VCAN-209ENST00000513016 RAB9AP51151 201 aa3.76□□□□□ -1.81
VCAN-209ENST00000513016 SSTP61278 116 aa3.76□□□□□ -1.81
VCAN-209ENST00000513016 CFHR1Q03591 330 aa3.76□□□□□ -1.81
VCAN-209ENST00000513016 SMN1Q16637 294 aaKnown RBP3.76□□□□□ -1.81
VCAN-209ENST00000513016 STAC2Q6ZMT1 411 aa3.76□□□□□ -1.81
VCAN-209ENST00000513016 SH2D5Q6ZV89 423 aa3.76□□□□□ -1.81
VCAN-209ENST00000513016 MZB1Q8WU39 189 aa3.76□□□□□ -1.81
VCAN-209ENST00000513016 SEC22AQ96IW7 307 aa3.76□□□□□ -1.81
VCAN-209ENST00000513016 TMUB1Q9BVT8 246 aa3.76□□□□□ -1.81
VCAN-209ENST00000513016 CHRNA10Q9GZZ6 450 aa3.76□□□□□ -1.81
VCAN-209ENST00000513016 TMEM38BQ9NVV0 291 aa3.76□□□□□ -1.81
VCAN-209ENST00000513016 FBXL17Q9UF56 701 aa3.76□□□□□ -1.81
VCAN-209ENST00000513016 LSM2Q9Y333 95 aaKnown RBP3.76□□□□□ -1.81
VCAN-209ENST00000513016 SERTM2A0A1B0GWG4 89 aa3.75□□□□□ -1.81
VCAN-209ENST00000513016 FAM157AC9JC47 383 aa3.75□□□□□ -1.81
VCAN-209ENST00000513016 AGPAT2O15120 278 aa3.75□□□□□ -1.81
VCAN-209ENST00000513016 JTBO76095 146 aa3.75□□□□□ -1.81
VCAN-209ENST00000513016 TCRBP04435 133 aa3.75□□□□□ -1.81
VCAN-209ENST00000513016 SLC25A6P12236 298 aa3.75□□□□□ -1.81
VCAN-209ENST00000513016 C16orf47Q6ZP98 133 aaPredicted RBP3.75□□□□□ -1.81
VCAN-209ENST00000513016 RBPMS2Q6ZRY4 209 aaKnown RBP3.75□□□□□ -1.81
VCAN-209ENST00000513016 MDP1Q86V88 176 aa3.75□□□□□ -1.81
VCAN-209ENST00000513016 GCSAMQ8N6F7 178 aa3.75□□□□□ -1.81
VCAN-209ENST00000513016 TMEM229BQ8NBD8 167 aa3.75□□□□□ -1.81
VCAN-209ENST00000513016 RTN4IP1Q8WWV3 396 aaPredicted RBP3.75□□□□□ -1.81
VCAN-209ENST00000513016 TEX37Q96LM6 180 aa3.75□□□□□ -1.81
VCAN-209ENST00000513016 CDCA4Q9BXL8 241 aa3.75□□□□□ -1.81
VCAN-209ENST00000513016 PLA2G12AQ9BZM1 189 aa3.75□□□□□ -1.81
VCAN-209ENST00000513016 OPN3Q9H1Y3 402 aaPredicted RBP3.75□□□□□ -1.81
VCAN-209ENST00000513016 HRH4Q9H3N8 390 aa3.75□□□□□ -1.81
VCAN-209ENST00000513016 ZMAT3Q9HA38 289 aaKnown RBP3.75□□□□□ -1.81
VCAN-209ENST00000513016 PCDHGA9Q9Y5G4 932 aaKnown RBP3.75□□□□□ -1.81
VCAN-209ENST00000513016 PUS1Q9Y606 427 aaKnown RBP eCLIP3.75□□□□□ -1.81
VCAN-209ENST00000513016 KIAA0100Q14667 2235 aaKnown RBP3.75□□□□□ -1.81
VCAN-209ENST00000513016 FAM221AA4D161 298 aa3.75□□□□□ -1.81
VCAN-209ENST00000513016 ZNF724A8MTY0 619 aa3.75□□□□□ -1.81
VCAN-209ENST00000513016 NME2P1O60361 137 aa3.75□□□□□ -1.81
VCAN-209ENST00000513016 NME2P22392 152 aa3.75□□□□□ -1.81
VCAN-209ENST00000513016 OR3A1P47881 315 aa3.75□□□□□ -1.81
VCAN-209ENST00000513016 ZP4Q12836 540 aa3.75□□□□□ -1.81
VCAN-209ENST00000513016 ELOVL1Q9BW60 279 aa3.75□□□□□ -1.81
VCAN-209ENST00000513016 IL20Q9NYY1 176 aa3.75□□□□□ -1.81
VCAN-209ENST00000513016 SLC25A37Q9NYZ2 338 aa3.75□□□□□ -1.81
VCAN-209ENST00000513016 MRPS18BQ9Y676 258 aaKnown RBP3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms