RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 IKZF5Q9H5V7 419 aa3.11□□□□□ -1.91
HTT-210ENST00000512909 RMND5AQ9H871 391 aa3.11□□□□□ -1.91
HTT-210ENST00000512909 TMBIM4Q9HC24 238 aa3.11□□□□□ -1.91
HTT-210ENST00000512909 ZNF629Q9UEG4 869 aaPredicted RBP3.11□□□□□ -1.91
HTT-210ENST00000512909 MCTS1Q9ULC4 181 aaKnown RBP3.11□□□□□ -1.91
HTT-210ENST00000512909 COPS3Q9UNS2 423 aa3.11□□□□□ -1.91
HTT-210ENST00000512909 MED13Q9UHV7 2174 aa3.11□□□□□ -1.91
HTT-210ENST00000512909 ZFYVE26Q68DK2 2539 aa3.11□□□□□ -1.91
HTT-210ENST00000512909 COL6A6A6NMZ7 2263 aa3.1□□□□□ -1.91
HTT-210ENST00000512909 SPEGQ15772 3267 aa3.1□□□□□ -1.91
HTT-210ENST00000512909 ATRXP46100 2492 aa3.1□□□□□ -1.91
HTT-210ENST00000512909 ZNF462Q96JM2 2506 aa3.1□□□□□ -1.91
HTT-210ENST00000512909 IGHV3-15A0A0B4J1V0 119 aa3.1□□□□□ -1.91
HTT-210ENST00000512909 A0A1W2PNV4 684 aa3.1□□□□□ -1.91
HTT-210ENST00000512909 C5orf58C9J3I9 102 aa3.1□□□□□ -1.91
HTT-210ENST00000512909 SULT2B1O00204 365 aa3.1□□□□□ -1.91
HTT-210ENST00000512909 RFXANKO14593 260 aa3.1□□□□□ -1.91
HTT-210ENST00000512909 HDAC3O15379 428 aa3.1□□□□□ -1.91
HTT-210ENST00000512909 MAGEB3O15480 346 aa3.1□□□□□ -1.91
HTT-210ENST00000512909 ZNF264O43296 627 aa3.1□□□□□ -1.91
HTT-210ENST00000512909 FCMRO60667 390 aa3.1□□□□□ -1.91
HTT-210ENST00000512909 TSC22D2O75157 780 aa3.1□□□□□ -1.91
HTT-210ENST00000512909 LYPD3O95274 346 aa3.1□□□□□ -1.91
HTT-210ENST00000512909 KRT75O95678 551 aa3.1□□□□□ -1.91
HTT-210ENST00000512909 KRT8P05787 483 aa3.1□□□□□ -1.91
HTT-210ENST00000512909 PABPC4LP0CB38 370 aaKnown RBP3.1□□□□□ -1.91
HTT-210ENST00000512909 ZNF708P17019 499 aa3.1□□□□□ -1.91
HTT-210ENST00000512909 PGCP20142 388 aa3.1□□□□□ -1.91
HTT-210ENST00000512909 FASP25445 335 aa3.1□□□□□ -1.91
HTT-210ENST00000512909 IDH2P48735 452 aaKnown RBP3.1□□□□□ -1.91
HTT-210ENST00000512909 LHX2P50458 406 aa3.1□□□□□ -1.91
HTT-210ENST00000512909 P2RX1P51575 399 aa3.1□□□□□ -1.91
HTT-210ENST00000512909 POLR2JP52435 117 aaKnown RBP3.1□□□□□ -1.91
HTT-210ENST00000512909 ZNF136P52737 540 aa3.1□□□□□ -1.91
HTT-210ENST00000512909 CLDN18P56856 261 aa3.1□□□□□ -1.91
HTT-210ENST00000512909 OR2B6P58173 313 aa3.1□□□□□ -1.91
HTT-210ENST00000512909 HBA1P69905 142 aa3.1□□□□□ -1.91
HTT-210ENST00000512909 CBX1P83916 185 aa3.1□□□□□ -1.91
HTT-210ENST00000512909 EWSR1Q01844 656 aaKnown RBP eCLIP3.1□□□□□ -1.91
HTT-210ENST00000512909 LRRC74AQ0VAA2 488 aa3.1□□□□□ -1.91
HTT-210ENST00000512909 MERTKQ12866 999 aa3.1□□□□□ -1.91
HTT-210ENST00000512909 GNA13Q14344 377 aa3.1□□□□□ -1.91
HTT-210ENST00000512909 LAGE3Q14657 143 aa3.1□□□□□ -1.91
HTT-210ENST00000512909 BCL2A1Q16548 175 aa3.1□□□□□ -1.91
HTT-210ENST00000512909 TRIM16LQ309B1 348 aa3.1□□□□□ -1.91
HTT-210ENST00000512909 ARHGAP11BQ3KRB8 267 aa3.1□□□□□ -1.91
HTT-210ENST00000512909 OR2B11Q5JQS5 317 aa3.1□□□□□ -1.91
HTT-210ENST00000512909 PDZK1Q5T2W1 519 aa3.1□□□□□ -1.91
HTT-210ENST00000512909 AGBL2Q5U5Z8 902 aa3.1□□□□□ -1.91
HTT-210ENST00000512909 UFSP1Q6NVU6 142 aa3.1□□□□□ -1.91
HTT-210ENST00000512909 EIF3MQ7L2H7 374 aaKnown RBP3.1□□□□□ -1.91
HTT-210ENST00000512909 ZNF550Q7Z398 422 aa3.1□□□□□ -1.91
HTT-210ENST00000512909 MOB3BQ86TA1 216 aa3.1□□□□□ -1.91
HTT-210ENST00000512909 ZDHHC21Q8IVQ6 265 aa3.1□□□□□ -1.91
HTT-210ENST00000512909 OR10H4Q8NGA5 316 aa3.1□□□□□ -1.91
HTT-210ENST00000512909 OR10A7Q8NGE5 316 aa3.1□□□□□ -1.91
HTT-210ENST00000512909 OR51G2Q8NGK0 314 aa3.1□□□□□ -1.91
HTT-210ENST00000512909 OR2V1Q8NHB1 315 aa3.1□□□□□ -1.91
HTT-210ENST00000512909 FNDC9Q8TBE3 224 aa3.1□□□□□ -1.91
HTT-210ENST00000512909 FAM110BQ8TC76 370 aa3.1□□□□□ -1.91
HTT-210ENST00000512909 GPR119Q8TDV5 335 aa3.1□□□□□ -1.91
HTT-210ENST00000512909 TMEM234Q8WY98 164 aa3.1□□□□□ -1.91
HTT-210ENST00000512909 ROPN1LQ96C74 230 aa3.1□□□□□ -1.91
HTT-210ENST00000512909 PHYHIPLQ96FC7 376 aa3.1□□□□□ -1.91
HTT-210ENST00000512909 PIK3IP1Q96FE7 263 aa3.1□□□□□ -1.91
HTT-210ENST00000512909 ITCHQ96J02 903 aa3.1□□□□□ -1.91
HTT-210ENST00000512909 SDF2Q99470 211 aa3.1□□□□□ -1.91
HTT-210ENST00000512909 YTHDF1Q9BYJ9 559 aaKnown RBP3.1□□□□□ -1.91
HTT-210ENST00000512909 NARFLQ9H6Q4 476 aa3.1□□□□□ -1.91
HTT-210ENST00000512909 ELOVL3Q9HB03 270 aa3.1□□□□□ -1.91
HTT-210ENST00000512909 PLGRKTQ9HBL7 147 aa3.1□□□□□ -1.91
HTT-210ENST00000512909 MCCC2Q9HCC0 563 aa3.1□□□□□ -1.91
HTT-210ENST00000512909 KLHL28Q9NXS3 571 aa3.1□□□□□ -1.91
HTT-210ENST00000512909 ZNF226Q9NYT6 803 aa3.1□□□□□ -1.91
HTT-210ENST00000512909 RPS6KB2Q9UBS0 482 aa3.1□□□□□ -1.91
HTT-210ENST00000512909 BLOC1S6Q9UL45 172 aa3.1□□□□□ -1.91
HTT-210ENST00000512909 ABCG2Q9UNQ0 655 aa3.1□□□□□ -1.91
HTT-210ENST00000512909 GSTK1Q9Y2Q3 226 aa3.1□□□□□ -1.91
HTT-210ENST00000512909 IFT52Q9Y366 437 aa3.1□□□□□ -1.91
HTT-210ENST00000512909 MDC1Q14676 2089 aaKnown RBP3.1□□□□□ -1.91
HTT-210ENST00000512909 A0A0J9YW62 118 aa3.09□□□□□ -1.91
HTT-210ENST00000512909 CIB4A0PJX0 185 aa3.09□□□□□ -1.91
HTT-210ENST00000512909 GJE1A6NN92 205 aa3.09□□□□□ -1.91
HTT-210ENST00000512909 EVPLLA8MZ36 301 aa3.09□□□□□ -1.91
HTT-210ENST00000512909 KLLNB2CW77 178 aa3.09□□□□□ -1.91
HTT-210ENST00000512909 E9PBE3 544 aa3.09□□□□□ -1.91
HTT-210ENST00000512909 POLR3GO15318 223 aaPredicted RBP3.09□□□□□ -1.91
HTT-210ENST00000512909 EIF4E2O60573 245 aaKnown RBP3.09□□□□□ -1.91
HTT-210ENST00000512909 SNRNP200O75643 2136 aaKnown RBP3.09□□□□□ -1.91
HTT-210ENST00000512909 AQP8O94778 261 aa3.09□□□□□ -1.91
HTT-210ENST00000512909 H6PDO95479 791 aa3.09□□□□□ -1.91
HTT-210ENST00000512909 LALBAP00709 142 aa3.09□□□□□ -1.91
HTT-210ENST00000512909 IGF1P05019 195 aa3.09□□□□□ -1.91
HTT-210ENST00000512909 IL6P05231 212 aa3.09□□□□□ -1.91
HTT-210ENST00000512909 IDO1P14902 403 aa3.09□□□□□ -1.91
HTT-210ENST00000512909 CD1EP15812 388 aa3.09□□□□□ -1.91
HTT-210ENST00000512909 IL32P24001 234 aa3.09□□□□□ -1.91
HTT-210ENST00000512909 CXCR1P25024 350 aa3.09□□□□□ -1.91
HTT-210ENST00000512909 LCN1P31025 176 aa3.09□□□□□ -1.91
HTT-210ENST00000512909 PEX19P40855 299 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms