RNA–Protein interactions for RNA: ENST00000511895.1

LINC01088-208, Transcript of long intergenic non-protein coding RNA 1088, human

TSL 2 BASIC

Gene LINC01088, Length 795 nt, Biotype antisense RNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01088-208	ENST00000511895	TIPIN	Q9BVW5	301 aa		3.11	□□□□□ -1.91
LINC01088-208	ENST00000511895	MFF	Q9GZY8	342 aa		3.11	□□□□□ -1.91
LINC01088-208	ENST00000511895	VCX2	Q9H322	139 aa		3.11	□□□□□ -1.91
LINC01088-208	ENST00000511895	FAM49B	Q9NUQ9	324 aa		3.11	□□□□□ -1.91
LINC01088-208	ENST00000511895	CLEC4A	Q9UMR7	237 aa		3.11	□□□□□ -1.91
LINC01088-208	ENST00000511895	PIGL	Q9Y2B2	252 aa		3.11	□□□□□ -1.91
LINC01088-208	ENST00000511895	IGLV2-18	A0A075B6J9	118 aa		3.1	□□□□□ -1.91
LINC01088-208	ENST00000511895		F5H5T6	163 aa		3.1	□□□□□ -1.91
LINC01088-208	ENST00000511895	RBBP9	O75884	186 aa		3.1	□□□□□ -1.91
LINC01088-208	ENST00000511895	VAMP5	O95183	116 aa		3.1	□□□□□ -1.91
LINC01088-208	ENST00000511895	IGKV1-17	P01599	117 aa		3.1	□□□□□ -1.91
LINC01088-208	ENST00000511895	IGHV2-5	P01817	119 aa		3.1	□□□□□ -1.91
LINC01088-208	ENST00000511895	TNNC2	P02585	160 aa		3.1	□□□□□ -1.91
LINC01088-208	ENST00000511895	FABP3	P05413	133 aa		3.1	□□□□□ -1.91
LINC01088-208	ENST00000511895	COX6A1	P12074	109 aa		3.1	□□□□□ -1.91
LINC01088-208	ENST00000511895	MUC1	P15941	1255 aa	Predicted RBP	3.1	□□□□□ -1.91
LINC01088-208	ENST00000511895	YAP1	P46937	504 aa	Known RBP	3.1	□□□□□ -1.91
LINC01088-208	ENST00000511895	RORC	P51449	518 aa		3.1	□□□□□ -1.91
LINC01088-208	ENST00000511895	ERCC8	Q13216	396 aa		3.1	□□□□□ -1.91
LINC01088-208	ENST00000511895	GINS1	Q14691	196 aa		3.1	□□□□□ -1.91
LINC01088-208	ENST00000511895	ZFAND6	Q6FIF0	208 aa		3.1	□□□□□ -1.91
LINC01088-208	ENST00000511895	OR2A2	Q6IF42	318 aa		3.1	□□□□□ -1.91
LINC01088-208	ENST00000511895	C12orf29	Q8N999	325 aa		3.1	□□□□□ -1.91
LINC01088-208	ENST00000511895	OR1L4	Q8NGR5	311 aa		3.1	□□□□□ -1.91
LINC01088-208	ENST00000511895	ERMN	Q8TAM6	284 aa		3.1	□□□□□ -1.91
LINC01088-208	ENST00000511895	C10orf105	Q8TEF2	133 aa		3.1	□□□□□ -1.91
LINC01088-208	ENST00000511895	STMN2	Q93045	179 aa		3.1	□□□□□ -1.91
LINC01088-208	ENST00000511895	C8orf44	Q96CB5	159 aa		3.1	□□□□□ -1.91
LINC01088-208	ENST00000511895	PLEKHA8	Q96JA3	519 aa		3.1	□□□□□ -1.91
LINC01088-208	ENST00000511895	WFIKKN1	Q96NZ8	548 aa		3.1	□□□□□ -1.91
LINC01088-208	ENST00000511895	PSKH2	Q96QS6	385 aa		3.1	□□□□□ -1.91
LINC01088-208	ENST00000511895	TMEM59	Q9BXS4	323 aa		3.1	□□□□□ -1.91
LINC01088-208	ENST00000511895	TM6SF2	Q9BZW4	377 aa		3.1	□□□□□ -1.91
LINC01088-208	ENST00000511895	GORASP2	Q9H8Y8	452 aa		3.1	□□□□□ -1.91
LINC01088-208	ENST00000511895	KLHL28	Q9NXS3	571 aa		3.1	□□□□□ -1.91
LINC01088-208	ENST00000511895	GLS2	Q9UI32	602 aa		3.1	□□□□□ -1.91
LINC01088-208	ENST00000511895	NXT1	Q9UKK6	140 aa	Known RBP	3.1	□□□□□ -1.91
LINC01088-208	ENST00000511895	NCKAP5	O14513	1909 aa		3.09	□□□□□ -1.91
LINC01088-208	ENST00000511895		A0A0B4J2A0	478 aa		3.09	□□□□□ -1.91
LINC01088-208	ENST00000511895	ZNF726	A6NNF4	738 aa		3.09	□□□□□ -1.91
LINC01088-208	ENST00000511895	COLCA2	A8K830	154 aa		3.09	□□□□□ -1.91
LINC01088-208	ENST00000511895		H0YHG0	523 aa		3.09	□□□□□ -1.91
LINC01088-208	ENST00000511895	GABARAP	O95166	117 aa		3.09	□□□□□ -1.91
LINC01088-208	ENST00000511895	CD5	P06127	495 aa		3.09	□□□□□ -1.91
LINC01088-208	ENST00000511895	C2	P06681	752 aa		3.09	□□□□□ -1.91
LINC01088-208	ENST00000511895	ADRA2A	P08913	450 aa		3.09	□□□□□ -1.91
LINC01088-208	ENST00000511895	PRB4	P10163	310 aa	Predicted RBP	3.09	□□□□□ -1.91
LINC01088-208	ENST00000511895	PRTN3	P24158	256 aa		3.09	□□□□□ -1.91
LINC01088-208	ENST00000511895	OPRM1	P35372	400 aa		3.09	□□□□□ -1.91
LINC01088-208	ENST00000511895	RFC3	P40938	356 aa		3.09	□□□□□ -1.91
LINC01088-208	ENST00000511895	GALNT17	Q6IS24	598 aa		3.09	□□□□□ -1.91
LINC01088-208	ENST00000511895	SHISA6	Q6ZSJ9	500 aa		3.09	□□□□□ -1.91
LINC01088-208	ENST00000511895	TEX9	Q8N6V9	391 aa		3.09	□□□□□ -1.91
LINC01088-208	ENST00000511895	OR5B17	Q8NGF7	314 aa		3.09	□□□□□ -1.91
LINC01088-208	ENST00000511895	ISG20	Q96AZ6	181 aa	Known RBP	3.09	□□□□□ -1.91
LINC01088-208	ENST00000511895	SH3GL3	Q99963	347 aa		3.09	□□□□□ -1.91
LINC01088-208	ENST00000511895	ZNF2	Q9BSG1	426 aa	Predicted RBP	3.09	□□□□□ -1.91
LINC01088-208	ENST00000511895	MED18	Q9BUE0	208 aa		3.09	□□□□□ -1.91
LINC01088-208	ENST00000511895	RPP21	Q9H633	154 aa	Known RBP	3.09	□□□□□ -1.91
LINC01088-208	ENST00000511895	SHPK	Q9UHJ6	478 aa		3.09	□□□□□ -1.91
LINC01088-208	ENST00000511895	BLOC1S6	Q9UL45	172 aa		3.09	□□□□□ -1.91
LINC01088-208	ENST00000511895	FAT2	Q9NYQ8	4349 aa		3.09	□□□□□ -1.92
LINC01088-208	ENST00000511895	MYCBP2	O75592	4640 aa		3.08	□□□□□ -1.92
LINC01088-208	ENST00000511895	SNTN	A6NMZ2	147 aa		3.08	□□□□□ -1.92
LINC01088-208	ENST00000511895	CLDN11	O75508	207 aa		3.08	□□□□□ -1.92
LINC01088-208	ENST00000511895	SLC25A14	O95258	325 aa	Predicted RBP	3.08	□□□□□ -1.92
LINC01088-208	ENST00000511895	TEAD1	P28347	426 aa		3.08	□□□□□ -1.92
LINC01088-208	ENST00000511895	ZNF92	Q03936	586 aa		3.08	□□□□□ -1.92
LINC01088-208	ENST00000511895	PON3	Q15166	354 aa		3.08	□□□□□ -1.92
LINC01088-208	ENST00000511895	LRRC23	Q53EV4	343 aa	Predicted RBP	3.08	□□□□□ -1.92
LINC01088-208	ENST00000511895	BEX5	Q5H9J7	111 aa		3.08	□□□□□ -1.92
LINC01088-208	ENST00000511895	HMGN2P46	Q86SG4	172 aa		3.08	□□□□□ -1.92
LINC01088-208	ENST00000511895	LHFPL3	Q86UP9	236 aa		3.08	□□□□□ -1.92
LINC01088-208	ENST00000511895	STPG2	Q8N412	459 aa		3.08	□□□□□ -1.92
LINC01088-208	ENST00000511895	ARRDC1	Q8N5I2	433 aa		3.08	□□□□□ -1.92
LINC01088-208	ENST00000511895	BTN2A3P	Q96KV6	586 aa		3.08	□□□□□ -1.92
LINC01088-208	ENST00000511895	SLC39A3	Q9BRY0	314 aa		3.08	□□□□□ -1.92
LINC01088-208	ENST00000511895	ULBP1	Q9BZM6	244 aa		3.08	□□□□□ -1.92
LINC01088-208	ENST00000511895	ANKRD19P	Q9H560	264 aa		3.08	□□□□□ -1.92
LINC01088-208	ENST00000511895	HMGXB4	Q9UGU5	601 aa		3.08	□□□□□ -1.92
LINC01088-208	ENST00000511895	NIN	Q8N4C6	2090 aa		3.08	□□□□□ -1.92
LINC01088-208	ENST00000511895	IGHV1-45	A0A0A0MS14	117 aa		3.07	□□□□□ -1.92
LINC01088-208	ENST00000511895		A0A0D9SEW6	157 aa		3.07	□□□□□ -1.92
LINC01088-208	ENST00000511895		A0A1B0GVX0	72 aa		3.07	□□□□□ -1.92
LINC01088-208	ENST00000511895	TSPAN11	A1L157	253 aa		3.07	□□□□□ -1.92
LINC01088-208	ENST00000511895	C7orf66	A4D0T2	115 aa		3.07	□□□□□ -1.92
LINC01088-208	ENST00000511895	GOLGA6L4	A6NEF3	574 aa		3.07	□□□□□ -1.92
LINC01088-208	ENST00000511895	KLRC4	O43908	158 aa		3.07	□□□□□ -1.92
LINC01088-208	ENST00000511895	NEMF	O60524	1076 aa		3.07	□□□□□ -1.92
LINC01088-208	ENST00000511895	OR2B3	O76000	313 aa		3.07	□□□□□ -1.92
LINC01088-208	ENST00000511895	ASS1	P00966	412 aa	Known RBP	3.07	□□□□□ -1.92
LINC01088-208	ENST00000511895	APOE	P02649	317 aa		3.07	□□□□□ -1.92
LINC01088-208	ENST00000511895	RHOC	P08134	193 aa		3.07	□□□□□ -1.92
LINC01088-208	ENST00000511895	SERPINB5	P36952	375 aa		3.07	□□□□□ -1.92
LINC01088-208	ENST00000511895	CEBPD	P49716	269 aa	Predicted RBP	3.07	□□□□□ -1.92
LINC01088-208	ENST00000511895	POU2AF1	Q16633	256 aa		3.07	□□□□□ -1.92
LINC01088-208	ENST00000511895	H3F3C	Q6NXT2	135 aa		3.07	□□□□□ -1.92
LINC01088-208	ENST00000511895	ZNF880	Q6PDB4	577 aa		3.07	□□□□□ -1.92
LINC01088-208	ENST00000511895	LUZP2	Q86TE4	346 aa		3.07	□□□□□ -1.92
LINC01088-208	ENST00000511895	OAF	Q86UD1	273 aa		3.07	□□□□□ -1.92

Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms