RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 DNAH17Q9UFH2 4485 aa4.39□□□□□ -1.71
GYPB-212ENST00000511198 MEIKINA0A087WXM9 373 aa4.38□□□□□ -1.71
GYPB-212ENST00000511198 TRBV4-1A0A0J9YWV2 114 aa4.38□□□□□ -1.71
GYPB-212ENST00000511198 GNG14A0A1W2PPG7 69 aa4.38□□□□□ -1.71
GYPB-212ENST00000511198 A0A1W2PRG6 482 aa4.38□□□□□ -1.71
GYPB-212ENST00000511198 hCG_1807616A0A1W2PRN6 198 aa4.38□□□□□ -1.71
GYPB-212ENST00000511198 A0A1W2PRQ8 180 aa4.38□□□□□ -1.71
GYPB-212ENST00000511198 C5orf58C9J3I9 102 aa4.38□□□□□ -1.71
GYPB-212ENST00000511198 KRBOX1C9JBD0 128 aa4.38□□□□□ -1.71
GYPB-212ENST00000511198 H3BN98 237 aa4.38□□□□□ -1.71
GYPB-212ENST00000511198 GABRPO00591 440 aa4.38□□□□□ -1.71
GYPB-212ENST00000511198 NDUFA2O43678 99 aa4.38□□□□□ -1.71
GYPB-212ENST00000511198 LCMT2O60294 686 aaKnown RBP4.38□□□□□ -1.71
GYPB-212ENST00000511198 OR10H3O60404 316 aa4.38□□□□□ -1.71
GYPB-212ENST00000511198 TSC22D2O75157 780 aa4.38□□□□□ -1.71
GYPB-212ENST00000511198 SS18L1O75177 396 aaPredicted RBP4.38□□□□□ -1.71
GYPB-212ENST00000511198 NME6O75414 186 aaPredicted RBP4.38□□□□□ -1.71
GYPB-212ENST00000511198 C6orf47O95873 294 aa4.38□□□□□ -1.71
GYPB-212ENST00000511198 C1QCP02747 245 aa4.38□□□□□ -1.71
GYPB-212ENST00000511198 APOHP02749 345 aaPredicted RBP4.38□□□□□ -1.71
GYPB-212ENST00000511198 SFTPBP07988 381 aa4.38□□□□□ -1.71
GYPB-212ENST00000511198 IGFBP1P08833 259 aaPredicted RBP4.38□□□□□ -1.71
GYPB-212ENST00000511198 SULT1A3P0DMM9 295 aa4.38□□□□□ -1.71
GYPB-212ENST00000511198 SULT1A4P0DMN0 295 aa4.38□□□□□ -1.71
GYPB-212ENST00000511198 CCR7P32248 378 aa4.38□□□□□ -1.71
GYPB-212ENST00000511198 SOAT1P35610 550 aa4.38□□□□□ -1.71
GYPB-212ENST00000511198 RPL4P36578 427 aaKnown RBP4.38□□□□□ -1.71
GYPB-212ENST00000511198 OR1E2P47887 323 aa4.38□□□□□ -1.71
GYPB-212ENST00000511198 RFX3P48380 749 aa4.38□□□□□ -1.71
GYPB-212ENST00000511198 TGM4P49221 684 aa4.38□□□□□ -1.71
GYPB-212ENST00000511198 B3GALT5-AS1P59052 145 aa4.38□□□□□ -1.71
GYPB-212ENST00000511198 HBA1P69905 142 aa4.38□□□□□ -1.71
GYPB-212ENST00000511198 PITPNAQ00169 270 aa4.38□□□□□ -1.71
GYPB-212ENST00000511198 CDK5Q00535 292 aa4.38□□□□□ -1.71
GYPB-212ENST00000511198 FABP5Q01469 135 aa4.38□□□□□ -1.71
GYPB-212ENST00000511198 DHODHQ02127 395 aa4.38□□□□□ -1.71
GYPB-212ENST00000511198 EXOSC2Q13868 293 aaKnown RBP4.38□□□□□ -1.71
GYPB-212ENST00000511198 GPR176Q14439 515 aa4.38□□□□□ -1.71
GYPB-212ENST00000511198 GANABQ14697 944 aaKnown RBP4.38□□□□□ -1.71
GYPB-212ENST00000511198 PON3Q15166 354 aa4.38□□□□□ -1.71
GYPB-212ENST00000511198 FCN2Q15485 313 aa4.38□□□□□ -1.71
GYPB-212ENST00000511198 DEFB134Q4QY38 66 aa4.38□□□□□ -1.71
GYPB-212ENST00000511198 HBMQ6B0K9 141 aa4.38□□□□□ -1.71
GYPB-212ENST00000511198 MFSD12Q6NUT3 480 aa4.38□□□□□ -1.71
GYPB-212ENST00000511198 MED27Q6P2C8 311 aa4.38□□□□□ -1.71
GYPB-212ENST00000511198 ANGPTL8Q6UXH0 198 aa4.38□□□□□ -1.71
GYPB-212ENST00000511198 CHMP1BQ7LBR1 199 aa4.38□□□□□ -1.71
GYPB-212ENST00000511198 TPRA1Q86W33 373 aa4.38□□□□□ -1.71
GYPB-212ENST00000511198 THOC6Q86W42 341 aaKnown RBP4.38□□□□□ -1.71
GYPB-212ENST00000511198 OR8H3Q8N146 312 aa4.38□□□□□ -1.71
GYPB-212ENST00000511198 TCEANCQ8N8B7 351 aa4.38□□□□□ -1.71
GYPB-212ENST00000511198 MORN4Q8NDC4 146 aa4.38□□□□□ -1.71
GYPB-212ENST00000511198 OR10Z1Q8NGY1 313 aa4.38□□□□□ -1.71
GYPB-212ENST00000511198 CDC26Q8NHZ8 85 aa4.38□□□□□ -1.71
GYPB-212ENST00000511198 TEX47Q8TBZ9 253 aa4.38□□□□□ -1.71
GYPB-212ENST00000511198 RBPMSQ93062 196 aaKnown RBP4.38□□□□□ -1.71
GYPB-212ENST00000511198 RAD51AP1Q96B01 352 aa4.38□□□□□ -1.71
GYPB-212ENST00000511198 NEURL3Q96EH8 262 aa4.38□□□□□ -1.71
GYPB-212ENST00000511198 WDR34Q96EX3 536 aa4.38□□□□□ -1.71
GYPB-212ENST00000511198 PRAP1Q96NZ9 151 aa4.38□□□□□ -1.71
GYPB-212ENST00000511198 SLC38A2Q96QD8 506 aa4.38□□□□□ -1.71
GYPB-212ENST00000511198 OR4K3Q96R72 315 aa4.38□□□□□ -1.71
GYPB-212ENST00000511198 IL4I1Q96RQ9 567 aa4.38□□□□□ -1.71
GYPB-212ENST00000511198 ZNF607Q96SK3 696 aa4.38□□□□□ -1.71
GYPB-212ENST00000511198 EFCAB11Q9BUY7 163 aa4.38□□□□□ -1.71
GYPB-212ENST00000511198 PINK1Q9BXM7 581 aa4.38□□□□□ -1.71
GYPB-212ENST00000511198 TEX12Q9BXU0 123 aa4.38□□□□□ -1.71
GYPB-212ENST00000511198 POTEKPQ9BYX7 375 aa4.38□□□□□ -1.71
GYPB-212ENST00000511198 CHIAQ9BZP6 476 aa4.38□□□□□ -1.71
GYPB-212ENST00000511198 HDHD2Q9H0R4 259 aa4.38□□□□□ -1.71
GYPB-212ENST00000511198 OR51J1Q9H342 316 aa4.38□□□□□ -1.71
GYPB-212ENST00000511198 FANCFQ9NPI8 374 aa4.38□□□□□ -1.71
GYPB-212ENST00000511198 ZC4H2Q9NQZ6 224 aa4.38□□□□□ -1.71
GYPB-212ENST00000511198 TEX10Q9NXF1 929 aaPredicted RBP4.38□□□□□ -1.71
GYPB-212ENST00000511198 COMMD3Q9UBI1 195 aa4.38□□□□□ -1.71
GYPB-212ENST00000511198 EXTL2Q9UBQ6 330 aa4.38□□□□□ -1.71
GYPB-212ENST00000511198 SLC22A14Q9Y267 594 aa4.38□□□□□ -1.71
GYPB-212ENST00000511198 NPTNQ9Y639 398 aa4.38□□□□□ -1.71
GYPB-212ENST00000511198 APOBP04114 4563 aaKnown RBP4.38□□□□□ -1.71
GYPB-212ENST00000511198 A0A1B0GW55 424 aa4.37□□□□□ -1.71
GYPB-212ENST00000511198 ANKDD1BA6NHY2 528 aa4.37□□□□□ -1.71
GYPB-212ENST00000511198 SMLR1H3BR10 107 aa4.37□□□□□ -1.71
GYPB-212ENST00000511198 M0R233 179 aa4.37□□□□□ -1.71
GYPB-212ENST00000511198 TOR1AO14656 332 aa4.37□□□□□ -1.71
GYPB-212ENST00000511198 FFAR1O14842 300 aa4.37□□□□□ -1.71
GYPB-212ENST00000511198 CTDSPLO15194 276 aa4.37□□□□□ -1.71
GYPB-212ENST00000511198 PLOD3O60568 738 aa4.37□□□□□ -1.71
GYPB-212ENST00000511198 PSIP1O75475 530 aaKnown RBP4.37□□□□□ -1.71
GYPB-212ENST00000511198 SOX14O95416 240 aa4.37□□□□□ -1.71
GYPB-212ENST00000511198 C1orf105O95561 183 aa4.37□□□□□ -1.71
GYPB-212ENST00000511198 ETHE1O95571 254 aa4.37□□□□□ -1.71
GYPB-212ENST00000511198 LALBAP00709 142 aa4.37□□□□□ -1.71
GYPB-212ENST00000511198 CATP04040 527 aaKnown RBP4.37□□□□□ -1.71
GYPB-212ENST00000511198 RPN2P04844 631 aa4.37□□□□□ -1.71
GYPB-212ENST00000511198 HOXB5P09067 269 aa4.37□□□□□ -1.71
GYPB-212ENST00000511198 DUX4L2P0CJ85 424 aa4.37□□□□□ -1.71
GYPB-212ENST00000511198 DUX4L3P0CJ86 424 aa4.37□□□□□ -1.71
GYPB-212ENST00000511198 DUX4L4P0CJ87 422 aa4.37□□□□□ -1.71
GYPB-212ENST00000511198 DUX4L5P0CJ88 424 aa4.37□□□□□ -1.71
GYPB-212ENST00000511198 DUX4L6P0CJ89 424 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms