RNA–Protein interactions for RNA: ENST00000509601.1

TPM3-220, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 543 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-220ENST00000509601 KRT8P05787 483 aa14.71□□□□□ -0.05
TPM3-220ENST00000509601 PGA5P0DJD9 388 aa14.71□□□□□ -0.05
TPM3-220ENST00000509601 NDUFB7P17568 137 aa14.71□□□□□ -0.05
TPM3-220ENST00000509601 IER3P46695 156 aa14.71□□□□□ -0.05
TPM3-220ENST00000509601 TMED1Q13445 227 aa14.71□□□□□ -0.05
TPM3-220ENST00000509601 CD177Q8N6Q3 437 aa14.71□□□□□ -0.05
TPM3-220ENST00000509601 POC1AQ8NBT0 407 aa14.71□□□□□ -0.05
TPM3-220ENST00000509601 RORBQ92753 470 aa14.71□□□□□ -0.05
TPM3-220ENST00000509601 ELL3Q9HB65 397 aaPredicted RBP14.71□□□□□ -0.05
TPM3-220ENST00000509601 C1RLQ9NZP8 487 aa14.71□□□□□ -0.05
TPM3-220ENST00000509601 RFPL4AA6NLU0 287 aa14.7□□□□□ -0.06
TPM3-220ENST00000509601 DHRS7CA6NNS2 312 aa14.7□□□□□ -0.06
TPM3-220ENST00000509601 RFPL4AL1F8VTS6 287 aa14.7□□□□□ -0.06
TPM3-220ENST00000509601 SPRY1O43609 319 aaPredicted RBP14.7□□□□□ -0.06
TPM3-220ENST00000509601 SULT1C4O75897 302 aa14.7□□□□□ -0.06
TPM3-220ENST00000509601 IGHV4-59P01825 116 aa14.7□□□□□ -0.06
TPM3-220ENST00000509601 ALPLP05186 524 aa14.7□□□□□ -0.06
TPM3-220ENST00000509601 HAAOP46952 286 aa14.7□□□□□ -0.06
TPM3-220ENST00000509601 ZNF85Q03923 595 aa14.7□□□□□ -0.06
TPM3-220ENST00000509601 LDLRAD3Q86YD5 345 aa14.7□□□□□ -0.06
TPM3-220ENST00000509601 ZNF573Q86YE8 665 aa14.7□□□□□ -0.06
TPM3-220ENST00000509601 CMTM4Q8IZR5 234 aa14.7□□□□□ -0.06
TPM3-220ENST00000509601 TBC1D15Q8TC07 691 aa14.7□□□□□ -0.06
TPM3-220ENST00000509601 NPRL2Q8WTW4 380 aa14.7□□□□□ -0.06
TPM3-220ENST00000509601 SSMEM1Q8WWF3 244 aa14.7□□□□□ -0.06
TPM3-220ENST00000509601 TRUB1Q8WWH5 349 aaKnown RBP14.7□□□□□ -0.06
TPM3-220ENST00000509601 MPZP25189 248 aa14.69□□□□□ -0.06
TPM3-220ENST00000509601 PRDX2P32119 198 aa14.69□□□□□ -0.06
TPM3-220ENST00000509601 ISL1P61371 349 aa14.69□□□□□ -0.06
TPM3-220ENST00000509601 KLRD1Q13241 179 aa14.69□□□□□ -0.06
TPM3-220ENST00000509601 KPNB1Q14974 876 aaKnown RBP14.69□□□□□ -0.06
TPM3-220ENST00000509601 ODF4Q2M2E3 257 aa14.69□□□□□ -0.06
TPM3-220ENST00000509601 ANGPTL5Q86XS5 388 aa14.69□□□□□ -0.06
TPM3-220ENST00000509601 CALHM1Q8IU99 346 aa14.69□□□□□ -0.06
TPM3-220ENST00000509601 PRSS35Q8N3Z0 413 aa14.69□□□□□ -0.06
TPM3-220ENST00000509601 OR10H4Q8NGA5 316 aa14.69□□□□□ -0.06
TPM3-220ENST00000509601 SLITRK2Q9H156 845 aa14.69□□□□□ -0.06
TPM3-220ENST00000509601 USE1Q9NZ43 259 aa14.69□□□□□ -0.06
TPM3-220ENST00000509601 A0A1W2PRD5 423 aa14.68□□□□□ -0.06
TPM3-220ENST00000509601 A0A1W2PRF3 423 aa14.68□□□□□ -0.06
TPM3-220ENST00000509601 A0A1W2PRM7 423 aa14.68□□□□□ -0.06
TPM3-220ENST00000509601 H3BSH0 61 aa14.68□□□□□ -0.06
TPM3-220ENST00000509601 J3QRE1 110 aa14.68□□□□□ -0.06
TPM3-220ENST00000509601 J3QT63 122 aa14.68□□□□□ -0.06
TPM3-220ENST00000509601 M0R1W7 72 aa14.68□□□□□ -0.06
TPM3-220ENST00000509601 NDUFA7O95182 113 aa14.68□□□□□ -0.06
TPM3-220ENST00000509601 CDC42P60953 191 aa14.68□□□□□ -0.06
TPM3-220ENST00000509601 ERVK11-1P61568 191 aa14.68□□□□□ -0.06
TPM3-220ENST00000509601 UBE2V2Q15819 145 aa14.68□□□□□ -0.06
TPM3-220ENST00000509601 PRR31Q5SQ13 230 aa14.68□□□□□ -0.06
TPM3-220ENST00000509601 SLC25A30Q5SVS4 291 aa14.68□□□□□ -0.06
TPM3-220ENST00000509601 HCP5Q6MZN7 132 aa14.68□□□□□ -0.06
TPM3-220ENST00000509601 PNKDQ8N490 385 aa14.68□□□□□ -0.06
TPM3-220ENST00000509601 C11orf42Q8N5U0 333 aa14.68□□□□□ -0.06
TPM3-220ENST00000509601 TMEM185AQ8NFB2 350 aa14.68□□□□□ -0.06
TPM3-220ENST00000509601 HRASLS5Q96KN8 279 aa14.68□□□□□ -0.06
TPM3-220ENST00000509601 NRIP2Q9BQI9 281 aa14.68□□□□□ -0.06
TPM3-220ENST00000509601 ZNF696Q9H7X3 374 aa14.68□□□□□ -0.06
TPM3-220ENST00000509601 HES4Q9HCC6 221 aa14.68□□□□□ -0.06
TPM3-220ENST00000509601 NPFFO15130 113 aa14.67□□□□□ -0.06
TPM3-220ENST00000509601 SYT7O43581 403 aa14.67□□□□□ -0.06
TPM3-220ENST00000509601 ENTPD6O75354 484 aa14.67□□□□□ -0.06
TPM3-220ENST00000509601 CRYBA1P05813 215 aa14.67□□□□□ -0.06
TPM3-220ENST00000509601 ATP6V1E1P36543 226 aa14.67□□□□□ -0.06
TPM3-220ENST00000509601 UBE2E1P51965 193 aa14.67□□□□□ -0.06
TPM3-220ENST00000509601 GUCA2AQ02747 115 aa14.67□□□□□ -0.06
TPM3-220ENST00000509601 ZIK1Q3SY52 487 aaPredicted RBP14.67□□□□□ -0.06
TPM3-220ENST00000509601 TP53I3Q53FA7 332 aa14.67□□□□□ -0.06
TPM3-220ENST00000509601 RDH10Q8IZV5 341 aa14.67□□□□□ -0.06
TPM3-220ENST00000509601 BATF2Q8N1L9 274 aa14.67□□□□□ -0.06
TPM3-220ENST00000509601 DYRK2Q92630 601 aa14.67□□□□□ -0.06
TPM3-220ENST00000509601 RFKQ969G6 155 aa14.67□□□□□ -0.06
TPM3-220ENST00000509601 METTL8Q9H825 291 aaKnown RBP14.67□□□□□ -0.06
TPM3-220ENST00000509601 C19orf12Q9NSK7 152 aa14.67□□□□□ -0.06
TPM3-220ENST00000509601 AASSQ9UDR5 926 aa14.67□□□□□ -0.06
TPM3-220ENST00000509601 FAM96BQ9Y3D0 163 aa14.67□□□□□ -0.06
TPM3-220ENST00000509601 IGKV1-27A0A075B6S5 117 aa14.66□□□□□ -0.06
TPM3-220ENST00000509601 TRBV23-1A0A0A0MS06 115 aa14.66□□□□□ -0.06
TPM3-220ENST00000509601 A0A1B0GUS0 222 aa14.66□□□□□ -0.06
TPM3-220ENST00000509601 A0A1W2PQ09 198 aa14.66□□□□□ -0.06
TPM3-220ENST00000509601 ANKRD61A6NGH8 418 aa14.66□□□□□ -0.06
TPM3-220ENST00000509601 F8VVB4 439 aa14.66□□□□□ -0.06
TPM3-220ENST00000509601 F8VWA3 439 aa14.66□□□□□ -0.06
TPM3-220ENST00000509601 EI24O14681 340 aa14.66□□□□□ -0.06
TPM3-220ENST00000509601 GPR137BO60478 399 aa14.66□□□□□ -0.06
TPM3-220ENST00000509601 KIR3DL2P43630 455 aa14.66□□□□□ -0.06
TPM3-220ENST00000509601 CEBPDP49716 269 aaPredicted RBP14.66□□□□□ -0.06
TPM3-220ENST00000509601 RAG2P55895 527 aa14.66□□□□□ -0.06
TPM3-220ENST00000509601 SNRPGP62308 76 aaKnown RBP14.66□□□□□ -0.06
TPM3-220ENST00000509601 SRSF4Q08170 494 aaKnown RBP14.66□□□□□ -0.06
TPM3-220ENST00000509601 TAF9Q16594 264 aa14.66□□□□□ -0.06
TPM3-220ENST00000509601 OCLNQ16625 522 aa14.66□□□□□ -0.06
TPM3-220ENST00000509601 SMIM21Q3B7S5 101 aa14.66□□□□□ -0.06
TPM3-220ENST00000509601 ZNF561Q8N587 486 aa14.66□□□□□ -0.06
TPM3-220ENST00000509601 AJUBAQ96IF1 538 aa14.66□□□□□ -0.06
TPM3-220ENST00000509601 PKIBQ9C010 78 aa14.66□□□□□ -0.06
TPM3-220ENST00000509601 BEX1Q9HBH7 125 aa14.66□□□□□ -0.06
TPM3-220ENST00000509601 MTCH1Q9NZJ7 389 aa14.66□□□□□ -0.06
TPM3-220ENST00000509601 ZNRD1Q9P1U0 126 aa14.66□□□□□ -0.06
TPM3-220ENST00000509601 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms