RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 BORCS8Q96FH0 119 aa15.63■□□□□ 0.09
CCHCR1-228ENST00000509552 NKX6-2Q9C056 277 aaPredicted RBP15.63■□□□□ 0.09
CCHCR1-228ENST00000509552 ACKR4Q9NPB9 350 aa15.63■□□□□ 0.09
CCHCR1-228ENST00000509552 ANXA10Q9UJ72 324 aa15.63■□□□□ 0.09
CCHCR1-228ENST00000509552 ANGPTL7O43827 346 aa15.63■□□□□ 0.09
CCHCR1-228ENST00000509552 CTSDP07339 412 aaPredicted RBP15.63■□□□□ 0.09
CCHCR1-228ENST00000509552 CD79AP11912 226 aa15.63■□□□□ 0.09
CCHCR1-228ENST00000509552 RBP2P50120 134 aa15.63■□□□□ 0.09
CCHCR1-228ENST00000509552 STK11Q15831 433 aa15.63■□□□□ 0.09
CCHCR1-228ENST00000509552 MYO7BQ6PIF6 2116 aa15.63■□□□□ 0.09
CCHCR1-228ENST00000509552 LHFPL2Q6ZUX7 228 aa15.63■□□□□ 0.09
CCHCR1-228ENST00000509552 OR51F2Q8NH61 342 aa15.63■□□□□ 0.09
CCHCR1-228ENST00000509552 HDHD3Q9BSH5 251 aaPredicted RBP15.63■□□□□ 0.09
CCHCR1-228ENST00000509552 ZNF391Q9UJN7 358 aa15.63■□□□□ 0.09
CCHCR1-228ENST00000509552 HSF4Q9ULV5 492 aa15.63■□□□□ 0.09
CCHCR1-228ENST00000509552 RTTNQ86VV8 2226 aa15.62■□□□□ 0.09
CCHCR1-228ENST00000509552 TMEM218A2RU14 115 aa15.62■□□□□ 0.09
CCHCR1-228ENST00000509552 TPD52L2O43399 206 aaKnown RBP15.62■□□□□ 0.09
CCHCR1-228ENST00000509552 SPRY1O43609 319 aaPredicted RBP15.62■□□□□ 0.09
CCHCR1-228ENST00000509552 PLATP00750 562 aa15.62■□□□□ 0.09
CCHCR1-228ENST00000509552 HTR5AP47898 357 aa15.62■□□□□ 0.09
CCHCR1-228ENST00000509552 IL15RAQ13261 267 aa15.62■□□□□ 0.09
CCHCR1-228ENST00000509552 TAF9Q16594 264 aa15.62■□□□□ 0.09
CCHCR1-228ENST00000509552 FAAP24Q9BTP7 215 aa15.62■□□□□ 0.09
CCHCR1-228ENST00000509552 A0A0G2JMM0 328 aa15.62■□□□□ 0.09
CCHCR1-228ENST00000509552 A0A1W2PPB8 328 aa15.62■□□□□ 0.09
CCHCR1-228ENST00000509552 A0A1W2PRS3 328 aa15.62■□□□□ 0.09
CCHCR1-228ENST00000509552 ZNF716A6NP11 495 aa15.62■□□□□ 0.09
CCHCR1-228ENST00000509552 KIR3DP1A8MWS1 328 aa15.62■□□□□ 0.09
CCHCR1-228ENST00000509552 DNASE2O00115 360 aaPredicted RBP15.62■□□□□ 0.09
CCHCR1-228ENST00000509552 TAAR5O14804 337 aa15.62■□□□□ 0.09
CCHCR1-228ENST00000509552 CXCL13O43927 109 aa15.62■□□□□ 0.09
CCHCR1-228ENST00000509552 ATG12O94817 140 aa15.62■□□□□ 0.09
CCHCR1-228ENST00000509552 B4GALT1P15291 398 aa15.62■□□□□ 0.09
CCHCR1-228ENST00000509552 ZNF32P17041 273 aa15.62■□□□□ 0.09
CCHCR1-228ENST00000509552 OTX2P32243 289 aa15.62■□□□□ 0.09
CCHCR1-228ENST00000509552 ARHGDIBP52566 201 aa15.62■□□□□ 0.09
CCHCR1-228ENST00000509552 FAM122CQ6P4D5 195 aa15.62■□□□□ 0.09
CCHCR1-228ENST00000509552 GGNQ86UU5 652 aa15.62■□□□□ 0.09
CCHCR1-228ENST00000509552 ALKBH3Q96Q83 286 aaPredicted RBP15.62■□□□□ 0.09
CCHCR1-228ENST00000509552 CMSS1Q9BQ75 279 aaKnown RBP15.62■□□□□ 0.09
CCHCR1-228ENST00000509552 OR2S2Q9NQN1 319 aa15.62■□□□□ 0.09
CCHCR1-228ENST00000509552 NECAP2Q9NVZ3 263 aa15.62■□□□□ 0.09
CCHCR1-228ENST00000509552 TIMM10BQ9Y5J6 103 aa15.62■□□□□ 0.09
CCHCR1-228ENST00000509552 SDK2Q58EX2 2172 aa15.62■□□□□ 0.09
CCHCR1-228ENST00000509552 KIAA1549Q9HCM3 1950 aa15.62■□□□□ 0.09
CCHCR1-228ENST00000509552 OR6C6A6NF89 314 aa15.61■□□□□ 0.09
CCHCR1-228ENST00000509552 IFNA21P01568 189 aa15.61■□□□□ 0.09
CCHCR1-228ENST00000509552 OR5H8P0DN80 308 aa15.61■□□□□ 0.09
CCHCR1-228ENST00000509552 IAH1Q2TAA2 248 aaPredicted RBP15.61■□□□□ 0.09
CCHCR1-228ENST00000509552 PEAR1Q5VY43 1037 aaPredicted RBP15.61■□□□□ 0.09
CCHCR1-228ENST00000509552 EIF5AL1Q6IS14 154 aaKnown RBP15.61■□□□□ 0.09
CCHCR1-228ENST00000509552 AKR7LQ8NHP1 331 aa15.61■□□□□ 0.09
CCHCR1-228ENST00000509552 FNDC9Q8TBE3 224 aa15.61■□□□□ 0.09
CCHCR1-228ENST00000509552 TSNAXQ99598 290 aaKnown RBP15.61■□□□□ 0.09
CCHCR1-228ENST00000509552 SLC5A7Q9GZV3 580 aa15.61■□□□□ 0.09
CCHCR1-228ENST00000509552 AK3Q9UIJ7 227 aa15.61■□□□□ 0.09
CCHCR1-228ENST00000509552 PADI1Q9ULC6 663 aa15.61■□□□□ 0.09
CCHCR1-228ENST00000509552 ZNF850A8MQ14 1090 aa15.61■□□□□ 0.09
CCHCR1-228ENST00000509552 TOR1AO14656 332 aa15.61■□□□□ 0.09
CCHCR1-228ENST00000509552 TRAPPC6AO75865 159 aa15.61■□□□□ 0.09
CCHCR1-228ENST00000509552 NRASP01111 189 aa15.61■□□□□ 0.09
CCHCR1-228ENST00000509552 DTYMKP23919 212 aa15.61■□□□□ 0.09
CCHCR1-228ENST00000509552 NTF4P34130 210 aa15.61■□□□□ 0.09
CCHCR1-228ENST00000509552 PCBD1P61457 104 aa15.61■□□□□ 0.09
CCHCR1-228ENST00000509552 HGFACQ04756 655 aa15.61■□□□□ 0.09
CCHCR1-228ENST00000509552 RBM39Q14498 530 aaKnown RBP15.61■□□□□ 0.09
CCHCR1-228ENST00000509552 SMCO1Q147U7 214 aa15.61■□□□□ 0.09
CCHCR1-228ENST00000509552 ZNF528Q3MIS6 628 aa15.61■□□□□ 0.09
CCHCR1-228ENST00000509552 OR2V1Q8NHB1 315 aa15.61■□□□□ 0.09
CCHCR1-228ENST00000509552 FOXB1Q99853 325 aa15.61■□□□□ 0.09
CCHCR1-228ENST00000509552 RGCCQ9H4X1 137 aa15.61■□□□□ 0.09
CCHCR1-228ENST00000509552 IGKV1-27A0A075B6S5 117 aa15.6■□□□□ 0.09
CCHCR1-228ENST00000509552 CRYM-AS1A6NIL9 109 aa15.6■□□□□ 0.09
CCHCR1-228ENST00000509552 ZNF705EA8MWA4 302 aaPredicted RBP15.6■□□□□ 0.09
CCHCR1-228ENST00000509552 TDGF1P13385 188 aa15.6■□□□□ 0.09
CCHCR1-228ENST00000509552 TRIM61Q5EBN2 209 aa15.6■□□□□ 0.09
CCHCR1-228ENST00000509552 PPP1R32Q7Z5V6 425 aa15.6■□□□□ 0.09
CCHCR1-228ENST00000509552 FOXRED2Q8IWF2 684 aa15.6■□□□□ 0.09
CCHCR1-228ENST00000509552 MMP26Q9NRE1 261 aa15.6■□□□□ 0.09
CCHCR1-228ENST00000509552 DECR2Q9NUI1 292 aa15.6■□□□□ 0.09
CCHCR1-228ENST00000509552 PMS2P1A4D2B8 440 aa15.6■□□□□ 0.09
CCHCR1-228ENST00000509552 LAMTOR5O43504 91 aa15.6■□□□□ 0.09
CCHCR1-228ENST00000509552 PATE4P0C8F1 98 aa15.6■□□□□ 0.09
CCHCR1-228ENST00000509552 FAM157CP0CG43 387 aa15.6■□□□□ 0.09
CCHCR1-228ENST00000509552 CTRB1P17538 263 aa15.6■□□□□ 0.09
CCHCR1-228ENST00000509552 RGS19P49795 217 aa15.6■□□□□ 0.09
CCHCR1-228ENST00000509552 RPS18P62269 152 aaKnown RBP15.6■□□□□ 0.09
CCHCR1-228ENST00000509552 PSG4Q00888 419 aa15.6■□□□□ 0.09
CCHCR1-228ENST00000509552 CEACAM16Q2WEN9 425 aa15.6■□□□□ 0.09
CCHCR1-228ENST00000509552 DCAF12Q5T6F0 453 aa15.6■□□□□ 0.09
CCHCR1-228ENST00000509552 CTRB2Q6GPI1 263 aa15.6■□□□□ 0.09
CCHCR1-228ENST00000509552 SVBPQ8N300 66 aa15.6■□□□□ 0.09
CCHCR1-228ENST00000509552 OR10D3Q8NH80 312 aa15.6■□□□□ 0.09
CCHCR1-228ENST00000509552 CNTNAP3BQ96NU0 1288 aa15.6■□□□□ 0.09
CCHCR1-228ENST00000509552 CNTNAP3Q9BZ76 1288 aa15.6■□□□□ 0.09
CCHCR1-228ENST00000509552 SLC7A11Q9UPY5 501 aa15.6■□□□□ 0.09
CCHCR1-228ENST00000509552 KCNIP3Q9Y2W7 256 aa15.6■□□□□ 0.09
CCHCR1-228ENST00000509552 TRIOBPQ9H2D6 2365 aa15.59■□□□□ 0.09
CCHCR1-228ENST00000509552 B4E171 279 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms