RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 TCF15Q12870 199 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 HTR4Q13639 388 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 EXOSC7Q15024 291 aaKnown RBP3.88□□□□□ -1.79
NIPBL-206ENST00000509429 SNRNP35Q16560 246 aaKnown RBP3.88□□□□□ -1.79
NIPBL-206ENST00000509429 FAM74A1Q5RGS3 127 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 FAM162BQ5T6X4 162 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 HIST2H3PS2Q5TEC6 136 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 HIST2H2BCQ6DN03 193 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 HIST2H2BDQ6DRA6 164 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 HIST2H2AA3Q6FI13 130 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 WDR59Q6PJI9 974 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 AGTRAPQ6RW13 159 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 FRRS1Q6ZNA5 592 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 MON1BQ7L1V2 547 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 FA2HQ7L5A8 372 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 RNF144BQ7Z419 303 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 IRF2BP2Q7Z5L9 587 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 C5orf24Q7Z6I8 188 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 CLNKQ7Z7G1 428 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 PIGZQ86VD9 579 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 ZNF547Q8IVP9 402 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 UBALD2Q8IYN6 164 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 FITM2Q8N6M3 262 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 KIR3DL3Q8N743 410 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 ZNF614Q8N883 585 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 PNPLA1Q8N8W4 532 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 ZNF439Q8NDP4 499 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 NFAM1Q8NET5 270 aaPredicted RBP3.88□□□□□ -1.79
NIPBL-206ENST00000509429 OR4F6Q8NGB9 312 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 OR10G4Q8NGN3 311 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 OR2G2Q8NGZ5 317 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 OR14A16Q8NHC5 309 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 ARRDC2Q8TBH0 407 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 PLPPR1Q8TBJ4 325 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 SPPL2BQ8TCT7 592 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 SLC7A6Q92536 515 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 PTX4Q96A99 478 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 TMEM159Q96B96 161 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 RCN3Q96D15 328 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 SLC35G5Q96KT7 338 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 UHRF2Q96PU4 802 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 APOL4Q9BPW4 351 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 MAP1LC3BQ9GZQ8 125 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 FAM49AQ9H0Q0 323 aaPredicted RBP3.88□□□□□ -1.79
NIPBL-206ENST00000509429 PRO1933Q9H354 126 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 ZNF385DQ9H6B1 395 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 METTL17Q9H7H0 456 aaPredicted RBP3.88□□□□□ -1.79
NIPBL-206ENST00000509429 CDH20Q9HBT6 801 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 B3GAT2Q9NPZ5 323 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 HINT3Q9NQE9 182 aaKnown RBP3.88□□□□□ -1.79
NIPBL-206ENST00000509429 SLC25A37Q9NYZ2 338 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 PRODH2Q9UF12 536 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 PRO0628Q9UI54 55 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 SLC45A2Q9UMX9 530 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 LAMP3Q9UQV4 416 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 ST3GAL6Q9Y274 331 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 FAM96BQ9Y3D0 163 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 RFNGQ9Y644 331 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 WSB1Q9Y6I7 421 aa3.88□□□□□ -1.79
NIPBL-206ENST00000509429 COL5A2P05997 1499 aaPredicted RBP3.87□□□□□ -1.79
NIPBL-206ENST00000509429 ITGB4P16144 1822 aa3.87□□□□□ -1.79
NIPBL-206ENST00000509429 NUP98P52948 1817 aa3.87□□□□□ -1.79
NIPBL-206ENST00000509429 NSG1A0A0A6YYJ2 146 aa3.87□□□□□ -1.79
NIPBL-206ENST00000509429 KIR2DS5A0A0G2JLQ3 304 aa3.87□□□□□ -1.79
NIPBL-206ENST00000509429 A0A0G2JNG1 304 aa3.87□□□□□ -1.79
NIPBL-206ENST00000509429 A0A0J9YY10 115 aa3.87□□□□□ -1.79
NIPBL-206ENST00000509429 EXOC1LA0A1B0GW35 172 aa3.87□□□□□ -1.79
NIPBL-206ENST00000509429 A0A1B0GX78 115 aa3.87□□□□□ -1.79
NIPBL-206ENST00000509429 TMEM8BA6NDV4 472 aa3.87□□□□□ -1.79
NIPBL-206ENST00000509429 OR5H1A6NKK0 313 aa3.87□□□□□ -1.79
NIPBL-206ENST00000509429 C3orf70A6NLC5 250 aaPredicted RBP3.87□□□□□ -1.79
NIPBL-206ENST00000509429 B4DGG1 531 aa3.87□□□□□ -1.79
NIPBL-206ENST00000509429 H3BMQ9 156 aa3.87□□□□□ -1.79
NIPBL-206ENST00000509429 DVL1O14640 695 aa3.87□□□□□ -1.79
NIPBL-206ENST00000509429 PHF1O43189 567 aaPredicted RBP3.87□□□□□ -1.79
NIPBL-206ENST00000509429 ENSAO43768 121 aaKnown RBP3.87□□□□□ -1.79
NIPBL-206ENST00000509429 GALR3O60755 368 aaPredicted RBP3.87□□□□□ -1.79
NIPBL-206ENST00000509429 UPK1BO75841 260 aa3.87□□□□□ -1.79
NIPBL-206ENST00000509429 CD160O95971 181 aa3.87□□□□□ -1.79
NIPBL-206ENST00000509429 LALBAP00709 142 aa3.87□□□□□ -1.79
NIPBL-206ENST00000509429 CRYGDP07320 174 aa3.87□□□□□ -1.79
NIPBL-206ENST00000509429 ESDP10768 282 aa3.87□□□□□ -1.79
NIPBL-206ENST00000509429 SLC2A2P11168 524 aaPredicted RBP3.87□□□□□ -1.79
NIPBL-206ENST00000509429 PSG1P11464 419 aa3.87□□□□□ -1.79
NIPBL-206ENST00000509429 CYBAP13498 195 aa3.87□□□□□ -1.79
NIPBL-206ENST00000509429 ABOP16442 354 aa3.87□□□□□ -1.79
NIPBL-206ENST00000509429 PRKACGP22612 351 aa3.87□□□□□ -1.79
NIPBL-206ENST00000509429 AADACP22760 399 aa3.87□□□□□ -1.79
NIPBL-206ENST00000509429 NMBRP28336 390 aa3.87□□□□□ -1.79
NIPBL-206ENST00000509429 GRPRP30550 384 aa3.87□□□□□ -1.79
NIPBL-206ENST00000509429 OPRL1P41146 370 aa3.87□□□□□ -1.79
NIPBL-206ENST00000509429 NSG1P42857 185 aa3.87□□□□□ -1.79
NIPBL-206ENST00000509429 GABRA2P47869 451 aa3.87□□□□□ -1.79
NIPBL-206ENST00000509429 DVL1P1P54792 670 aaPredicted RBP3.87□□□□□ -1.79
NIPBL-206ENST00000509429 AQP5P55064 265 aa3.87□□□□□ -1.79
NIPBL-206ENST00000509429 TAS2R31P59538 309 aa3.87□□□□□ -1.79
NIPBL-206ENST00000509429 TAS2R30P59541 319 aa3.87□□□□□ -1.79
NIPBL-206ENST00000509429 DEFA1P59665 94 aa3.87□□□□□ -1.79
NIPBL-206ENST00000509429 DEFA3P59666 94 aa3.87□□□□□ -1.79
NIPBL-206ENST00000509429 RAB8AP61006 207 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms