RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 RBM22Q9NW64 420 aaKnown RBP eCLIP1.78□□□□□ -2.12
DEPDC1B-204ENST00000509006 ZNF256Q9Y2P7 627 aaPredicted RBP1.78□□□□□ -2.12
DEPDC1B-204ENST00000509006 ORC6Q9Y5N6 252 aa1.78□□□□□ -2.12
DEPDC1B-204ENST00000509006 COL4A4P53420 1690 aaPredicted RBP1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 ZNF532Q9HCE3 1301 aa1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 TRAV8-6A0A0B4J262 113 aa1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 IGKV1D-13A0A0B4J2D9 117 aa1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 A0A0G2JN53 185 aa1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 A0A1W2PQL4 384 aaPredicted RBP1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 VPS37CA5D8V6 355 aaPredicted RBP1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 F5H768 121 aa1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 LINC01619G3V211 115 aa1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 H0Y9J4 135 aa1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 H7C1H1 209 aa1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 FGF16O43320 207 aa1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 GALR3O60755 368 aaPredicted RBP1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 REM1O75628 298 aa1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 SLC25A14O95258 325 aaPredicted RBP1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 SERPINA1P01009 418 aa1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 IGHV3-48P01763 117 aa1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 BGLAPP02818 100 aa1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 HLA-DPB1P04440 258 aa1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 FABP3P05413 133 aa1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 RPSAP08865 295 aaKnown RBP1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 GIPP09681 153 aaPredicted RBP1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 IGHV3-43DP0DP04 118 aa1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 IGKV1-13P0DP09 117 aa1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 GABRG2P18507 467 aa1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 PRPS1L1P21108 318 aa1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 PSMA1P25786 263 aaKnown RBP1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 PAX6P26367 422 aa1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 GDF1P27539 372 aa1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 MYCNOSP40205 109 aa1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 CBX5P45973 191 aa1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 GCLMP48507 274 aa1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 SULT1A1P50225 295 aa1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 SULT1A2P50226 295 aa1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 PPOXP50336 477 aa1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 UBE2E1P51965 193 aa1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 RND2P52198 227 aa1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 APOC4P55056 127 aa1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 CCL23P55773 120 aa1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 NUP107P57740 925 aa1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 TAS2R46P59540 309 aa1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 HBG1P69891 147 aa1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 HBG2P69892 147 aa1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 PRR3P79522 188 aaKnown RBP1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 FAM3AP98173 230 aa1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 PAX8Q06710 450 aa1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 BAXQ07812 192 aa1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 AESQ08117 197 aa1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 FZD2Q14332 565 aa1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 PTGES3Q15185 160 aaKnown RBP1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 BATFQ16520 125 aa1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 GSG1Q2KHT4 349 aa1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 HLA-DRB5Q30154 266 aa1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 CASC10Q5T4H9 136 aa1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 MARC1Q5VT66 337 aa1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 STEAP4Q687X5 459 aa1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 LEMD1Q68G75 181 aa1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 ZNF493Q6ZR52 646 aa1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 RTL4Q6ZR62 310 aa1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 FAM183BPQ6ZVS7 135 aa1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 STRADAQ7RTN6 431 aa1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 FAM19A1Q7Z5A9 133 aa1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 TMED4Q7Z7H5 227 aa1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 AKAP14Q86UN6 197 aa1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 SLC51BQ86UW2 128 aa1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 SLC25A42Q86VD7 318 aa1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 CPNE9Q8IYJ1 553 aa1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 ENTHD1Q8IYW4 607 aa1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 LGI3Q8N145 548 aa1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 COX18Q8N8Q8 333 aa1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 OR4P4Q8NGL7 312 aa1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 NEIL3Q8TAT5 605 aa1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 PIFOQ8TCI5 191 aa1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 BLNKQ8WV28 456 aa1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 OR5P2Q8WZ92 322 aa1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 RAB8BQ92930 207 aa1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 EXOSC8Q96B26 276 aaKnown RBP1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 IMP4Q96G21 291 aaKnown RBP1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 SMARCD1Q96GM5 515 aa1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 BTF3L4Q96K17 158 aa1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 CEP19Q96LK0 163 aa1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 UBE2E2Q96LR5 201 aa1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 MAGEB18Q96M61 343 aa1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 RNF145Q96MT1 663 aa1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 SIGLEC12Q96PQ1 595 aa1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 METTL26Q96S19 204 aa1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 FAAP24Q9BTP7 215 aa1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 TSGA10Q9BZW7 698 aa1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 SLC22A4Q9H015 551 aa1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 TPK1Q9H3S4 243 aa1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 CLMPQ9H6B4 373 aa1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 TMEM27Q9HBJ8 222 aa1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 FBXO8Q9NRD0 319 aa1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 VNN3Q9NY84 501 aa1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 IL37Q9NZH6 218 aa1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 ZNF581Q9P0T4 197 aa1.77□□□□□ -2.13
DEPDC1B-204ENST00000509006 CLCF1Q9UBD9 225 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms