RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 TMEM35BQ8NCS4 154 aa2.45□□□□□ -2.02
TOPBP1-206ENST00000508524 C10orf105Q8TEF2 133 aa2.45□□□□□ -2.02
TOPBP1-206ENST00000508524 TFGQ92734 400 aaPredicted RBP2.45□□□□□ -2.02
TOPBP1-206ENST00000508524 C11orf70Q9BRQ4 267 aa2.45□□□□□ -2.02
TOPBP1-206ENST00000508524 MED18Q9BUE0 208 aa2.45□□□□□ -2.02
TOPBP1-206ENST00000508524 DHX35Q9H5Z1 703 aaKnown RBP2.45□□□□□ -2.02
TOPBP1-206ENST00000508524 RPP21Q9H633 154 aaKnown RBP2.45□□□□□ -2.02
TOPBP1-206ENST00000508524 METTL17Q9H7H0 456 aaPredicted RBP2.45□□□□□ -2.02
TOPBP1-206ENST00000508524 ELOVL3Q9HB03 270 aa2.45□□□□□ -2.02
TOPBP1-206ENST00000508524 PKHD1P08F94 4074 aa2.44□□□□□ -2.02
TOPBP1-206ENST00000508524 ALMS1Q8TCU4 4167 aa2.44□□□□□ -2.02
TOPBP1-206ENST00000508524 TRBV11-1A0A0K0K1C0 115 aa2.44□□□□□ -2.02
TOPBP1-206ENST00000508524 A0A1B0GVX0 72 aa2.44□□□□□ -2.02
TOPBP1-206ENST00000508524 A0A1W2PPV9 198 aa2.44□□□□□ -2.02
TOPBP1-206ENST00000508524 ZNF860A6NHJ4 632 aa2.44□□□□□ -2.02
TOPBP1-206ENST00000508524 RPL36A-HNRNPH2H7BZ11 118 aa2.44□□□□□ -2.02
TOPBP1-206ENST00000508524 CCL22O00626 93 aa2.44□□□□□ -2.02
TOPBP1-206ENST00000508524 OR2J2O76002 312 aa2.44□□□□□ -2.02
TOPBP1-206ENST00000508524 GKN3PP0CG01 181 aa2.44□□□□□ -2.02
TOPBP1-206ENST00000508524 IL1RNP18510 177 aa2.44□□□□□ -2.02
TOPBP1-206ENST00000508524 USF1P22415 310 aaPredicted RBP2.44□□□□□ -2.02
TOPBP1-206ENST00000508524 GCAP28676 217 aa2.44□□□□□ -2.02
TOPBP1-206ENST00000508524 SRP14P37108 136 aaKnown RBP2.44□□□□□ -2.02
TOPBP1-206ENST00000508524 CD79BP40259 229 aa2.44□□□□□ -2.02
TOPBP1-206ENST00000508524 GSSP48637 474 aa2.44□□□□□ -2.02
TOPBP1-206ENST00000508524 RPL26P61254 145 aaKnown RBP2.44□□□□□ -2.02
TOPBP1-206ENST00000508524 BTG2P78543 158 aa2.44□□□□□ -2.02
TOPBP1-206ENST00000508524 KLHL30Q0D2K2 578 aa2.44□□□□□ -2.02
TOPBP1-206ENST00000508524 STK38Q15208 465 aa2.44□□□□□ -2.02
TOPBP1-206ENST00000508524 SLC35F2Q8IXU6 374 aa2.44□□□□□ -2.02
TOPBP1-206ENST00000508524 SLC38A6Q8IZM9 456 aa2.44□□□□□ -2.02
TOPBP1-206ENST00000508524 ATPAF2Q8N5M1 289 aa2.44□□□□□ -2.02
TOPBP1-206ENST00000508524 ZNF321PQ8N8H1 164 aa2.44□□□□□ -2.02
TOPBP1-206ENST00000508524 SNX31Q8N9S9 440 aa2.44□□□□□ -2.02
TOPBP1-206ENST00000508524 OR5T3Q8NGG3 340 aa2.44□□□□□ -2.02
TOPBP1-206ENST00000508524 OR51Q1Q8NH59 317 aa2.44□□□□□ -2.02
TOPBP1-206ENST00000508524 OR10C1Q96KK4 312 aa2.44□□□□□ -2.02
TOPBP1-206ENST00000508524 TTC25Q96NG3 672 aa2.44□□□□□ -2.02
TOPBP1-206ENST00000508524 MCEEQ96PE7 176 aa2.44□□□□□ -2.02
TOPBP1-206ENST00000508524 CSPG4P5Q96PW8 444 aa2.44□□□□□ -2.02
TOPBP1-206ENST00000508524 RNF2Q99496 336 aa2.44□□□□□ -2.02
TOPBP1-206ENST00000508524 FAM96AQ9H5X1 160 aa2.44□□□□□ -2.02
TOPBP1-206ENST00000508524 SMOXQ9NWM0 555 aa2.44□□□□□ -2.02
TOPBP1-206ENST00000508524 MED29Q9NX70 200 aa2.44□□□□□ -2.02
TOPBP1-206ENST00000508524 THUMPD1Q9NXG2 353 aaKnown RBP2.44□□□□□ -2.02
TOPBP1-206ENST00000508524 PCSK1NQ9UHG2 260 aa2.44□□□□□ -2.02
TOPBP1-206ENST00000508524 RPL26L1Q9UNX3 145 aaKnown RBP2.44□□□□□ -2.02
TOPBP1-206ENST00000508524 MRPS33Q9Y291 106 aaKnown RBP2.44□□□□□ -2.02
TOPBP1-206ENST00000508524 RFNGQ9Y644 331 aa2.44□□□□□ -2.02
TOPBP1-206ENST00000508524 SCN3AQ9NY46 2000 aa2.44□□□□□ -2.02
TOPBP1-206ENST00000508524 IGKV3D-11A0A0A0MRZ8 115 aa2.43□□□□□ -2.02
TOPBP1-206ENST00000508524 C15orf38-AP3S2A0A0A6YYH1 394 aa2.43□□□□□ -2.02
TOPBP1-206ENST00000508524 GLYATL1P3A0A0U1RQE8 302 aa2.43□□□□□ -2.02
TOPBP1-206ENST00000508524 KIR2DS1A0A191URI9 304 aa2.43□□□□□ -2.02
TOPBP1-206ENST00000508524 A0A1B0GVL5 298 aa2.43□□□□□ -2.02
TOPBP1-206ENST00000508524 CTAGE15A4D2H0 777 aa2.43□□□□□ -2.02
TOPBP1-206ENST00000508524 KCNK1O00180 336 aa2.43□□□□□ -2.02
TOPBP1-206ENST00000508524 RDH16O75452 317 aa2.43□□□□□ -2.02
TOPBP1-206ENST00000508524 CLDN9O95484 217 aa2.43□□□□□ -2.02
TOPBP1-206ENST00000508524 LSM8O95777 96 aaKnown RBP2.43□□□□□ -2.02
TOPBP1-206ENST00000508524 TGM6O95932 706 aa2.43□□□□□ -2.02
TOPBP1-206ENST00000508524 CSF3P09919 207 aa2.43□□□□□ -2.02
TOPBP1-206ENST00000508524 SLC25A16P16260 332 aa2.43□□□□□ -2.02
TOPBP1-206ENST00000508524 SYT1P21579 422 aa2.43□□□□□ -2.02
TOPBP1-206ENST00000508524 CD9P21926 228 aa2.43□□□□□ -2.02
TOPBP1-206ENST00000508524 CD151P48509 253 aa2.43□□□□□ -2.02
TOPBP1-206ENST00000508524 CDH6P55285 790 aa2.43□□□□□ -2.02
TOPBP1-206ENST00000508524 OR4D2P58180 307 aa2.43□□□□□ -2.02
TOPBP1-206ENST00000508524 KRTAP12-4P60329 112 aa2.43□□□□□ -2.02
TOPBP1-206ENST00000508524 UBA52P62987 128 aaKnown RBP2.43□□□□□ -2.02
TOPBP1-206ENST00000508524 XIAPP98170 497 aa2.43□□□□□ -2.02
TOPBP1-206ENST00000508524 PDIA2Q13087 525 aaKnown RBP2.43□□□□□ -2.02
TOPBP1-206ENST00000508524 KIR2DS1Q14954 304 aa2.43□□□□□ -2.02
TOPBP1-206ENST00000508524 BEX5Q5H9J7 111 aa2.43□□□□□ -2.02
TOPBP1-206ENST00000508524 PRAMEF20Q5VT98 475 aa2.43□□□□□ -2.02
TOPBP1-206ENST00000508524 FBXW9Q5XUX1 488 aa2.43□□□□□ -2.02
TOPBP1-206ENST00000508524 CENPQQ7L2Z9 268 aaPredicted RBP2.43□□□□□ -2.02
TOPBP1-206ENST00000508524 VN1R4Q7Z5H5 301 aa2.43□□□□□ -2.02
TOPBP1-206ENST00000508524 CTAGE6Q86UF2 777 aa2.43□□□□□ -2.02
TOPBP1-206ENST00000508524 LRRC25Q8N386 305 aaPredicted RBP2.43□□□□□ -2.02
TOPBP1-206ENST00000508524 TMEM156Q8N614 296 aa2.43□□□□□ -2.02
TOPBP1-206ENST00000508524 OR2L3Q8NG85 312 aa2.43□□□□□ -2.02
TOPBP1-206ENST00000508524 OR2A1Q8NGT9 310 aa2.43□□□□□ -2.02
TOPBP1-206ENST00000508524 OR5K2Q8NHB8 316 aa2.43□□□□□ -2.02
TOPBP1-206ENST00000508524 LKAAEAR1Q8TD35 194 aa2.43□□□□□ -2.02
TOPBP1-206ENST00000508524 OXGR1Q96P68 337 aa2.43□□□□□ -2.02
TOPBP1-206ENST00000508524 SFXN3Q9BWM7 321 aa2.43□□□□□ -2.02
TOPBP1-206ENST00000508524 UGT2B28Q9BY64 529 aa2.43□□□□□ -2.02
TOPBP1-206ENST00000508524 DRC3Q9H069 523 aa2.43□□□□□ -2.02
TOPBP1-206ENST00000508524 EXO5Q9H790 373 aa2.43□□□□□ -2.02
TOPBP1-206ENST00000508524 RBM22Q9NW64 420 aaKnown RBP eCLIP2.43□□□□□ -2.02
TOPBP1-206ENST00000508524 CALYQ9NYX4 217 aa2.43□□□□□ -2.02
TOPBP1-206ENST00000508524 HOOK1Q9UJC3 728 aaKnown RBP2.43□□□□□ -2.02
TOPBP1-206ENST00000508524 DNAJC12Q9UKB3 198 aa2.43□□□□□ -2.02
TOPBP1-206ENST00000508524 HEATR5BQ9P2D3 2071 aa2.43□□□□□ -2.02
TOPBP1-206ENST00000508524 SRRM2Q9UQ35 2752 aaKnown RBP2.42□□□□□ -2.02
TOPBP1-206ENST00000508524 WNK2Q9Y3S1 2297 aa2.42□□□□□ -2.02
TOPBP1-206ENST00000508524 NINQ8N4C6 2090 aa2.42□□□□□ -2.02
TOPBP1-206ENST00000508524 A0A1W2PP18 115 aa2.42□□□□□ -2.02
TOPBP1-206ENST00000508524 SLC5A10A0PJK1 596 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms